RNA–Protein interactions for RNA: ENST00000529998.5

UBASH3B-205, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 4

Gene UBASH3B, Length 698 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-205ENST00000529998 XKR4Q5GH76 650 aa9.48□□□□□ -0.89
UBASH3B-205ENST00000529998 GLRA4Q5JXX5 417 aa9.48□□□□□ -0.89
UBASH3B-205ENST00000529998 MICALL1Q8N3F8 863 aa9.48□□□□□ -0.89
UBASH3B-205ENST00000529998 ZSWIM2Q8NEG5 633 aa9.48□□□□□ -0.89
UBASH3B-205ENST00000529998 MAFAQ8NHW3 353 aaPredicted RBP9.48□□□□□ -0.89
UBASH3B-205ENST00000529998 BCL7CQ8WUZ0 217 aaPredicted RBP9.48□□□□□ -0.89
UBASH3B-205ENST00000529998 SCFD1Q8WVM8 642 aa9.48□□□□□ -0.89
UBASH3B-205ENST00000529998 POF1BQ8WVV4 589 aa9.48□□□□□ -0.89
UBASH3B-205ENST00000529998 PPM1EQ8WY54 764 aa9.48□□□□□ -0.89
UBASH3B-205ENST00000529998 RABGGTAQ92696 567 aa9.48□□□□□ -0.89
UBASH3B-205ENST00000529998 MRPL38Q96DV4 380 aaKnown RBP9.48□□□□□ -0.89
UBASH3B-205ENST00000529998 ZMAT2Q96NC0 199 aaKnown RBP9.48□□□□□ -0.89
UBASH3B-205ENST00000529998 RPS6KC1Q96S38 1066 aa9.48□□□□□ -0.89
UBASH3B-205ENST00000529998 PAAF1Q9BRP4 392 aa9.48□□□□□ -0.89
UBASH3B-205ENST00000529998 MSTO1Q9BUK6 570 aa9.48□□□□□ -0.89
UBASH3B-205ENST00000529998 LMCD1Q9NZU5 365 aa9.48□□□□□ -0.89
UBASH3B-205ENST00000529998 EXOC7Q9UPT5 735 aa9.48□□□□□ -0.89
UBASH3B-205ENST00000529998 SMIM28A0A1B0GU29 152 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 EIF3DO15371 548 aaKnown RBP eCLIP9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 TGFB1I1O43294 461 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 SLC34A2O95436 690 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 CLTAP09496 248 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 CXCL8P10145 99 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 IGFBP6P24592 240 aaPredicted RBP9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 IRS1P35568 1242 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 OR1G1P47890 313 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 ACOT2P49753 483 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 YARSP54577 528 aaKnown RBP9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 ERVFC1P60507 584 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 SOX4Q06945 474 aaPredicted RBP9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 PSMD2Q13200 908 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 POSTNQ15063 836 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 ENOX2Q16206 610 aaKnown RBP9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 SLFN12LQ6IEE8 588 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 KANK3Q6NY19 840 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 CRELD2Q6UXH1 353 aaPredicted RBP9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 CLEC17AQ6ZS10 378 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 STXBP4Q6ZWJ1 553 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 NELFCDQ8IXH7 590 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 SYCP3Q8IZU3 236 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 KIAA0895Q8NCT3 520 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 POMGNT1Q8WZA1 660 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 ERCC4Q92889 916 aaPredicted RBP9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 IGSF21Q96ID5 467 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 SNX27Q96L92 541 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 TIGD1Q96MW7 591 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 PPP1R10Q96QC0 940 aaKnown RBP9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 TMEM175Q9BSA9 504 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 VN1R3Q9BXE9 311 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 LMAN2LQ9H0V9 348 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 TMEM206Q9H813 350 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 TOPORSQ9NS56 1045 aaPredicted RBP9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 EXOC1Q9NV70 894 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 MARCH5Q9NX47 278 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 CPSF3Q9UKF6 684 aaKnown RBP9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 AGO2Q9UKV8 859 aaKnown RBP9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 FAN1Q9Y2M0 1017 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 PCDHGC5Q9Y5F6 944 aa9.47□□□□□ -0.89
UBASH3B-205ENST00000529998 TTC26A0AVF1 554 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 CASTOR2A6NHX0 329 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 LACTBL1A8MY62 500 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 RHOBTB3O94955 611 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 ADRB2P07550 413 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 KCNE1P15382 129 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 GARTP22102 1010 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 PPM1AP35813 382 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 UBE2HP62256 183 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 KRT17Q04695 432 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 UBE3AQ05086 875 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 SPAG1Q07617 926 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 TUSC3Q13454 348 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 PTPROQ16827 1216 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 BMT2Q1RMZ1 405 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 TMEM130Q8N3G9 435 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 C18orf25Q96B23 403 aaPredicted RBP9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 SAAL1Q96ER3 474 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 TMEM169Q96HH4 297 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 CBWD1Q9BRT8 395 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 PCIF1Q9H4Z3 704 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 RPF1Q9H9Y2 349 aaKnown RBP9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 GOLGA2P5Q9HBQ8 144 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 CNTN3Q9P232 1028 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 LZTS1Q9Y250 596 aa9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 PRG3Q9Y2Y8 225 aaPredicted RBP9.46□□□□□ -0.9
UBASH3B-205ENST00000529998 VWA8A3KMH1 1905 aa9.45□□□□□ -0.9
UBASH3B-205ENST00000529998 GOLGA8IPA6NC78 632 aa9.45□□□□□ -0.9
UBASH3B-205ENST00000529998 GOLGA8JA6NMD2 632 aa9.45□□□□□ -0.9
UBASH3B-205ENST00000529998 FSCN2O14926 492 aa9.45□□□□□ -0.9
UBASH3B-205ENST00000529998 CLIC2O15247 247 aa9.45□□□□□ -0.9
UBASH3B-205ENST00000529998 EFEMP2O95967 443 aa9.45□□□□□ -0.9
UBASH3B-205ENST00000529998 CLCNKBP51801 687 aa9.45□□□□□ -0.9
UBASH3B-205ENST00000529998 KCNB1Q14721 858 aa9.45□□□□□ -0.9
UBASH3B-205ENST00000529998 ZBTB6Q15916 424 aa9.45□□□□□ -0.9
UBASH3B-205ENST00000529998 KYAT1Q16773 422 aa9.45□□□□□ -0.9
UBASH3B-205ENST00000529998 TCEAL5Q5H9L2 206 aa9.45□□□□□ -0.9
UBASH3B-205ENST00000529998 CD300LGQ6UXG3 332 aa9.45□□□□□ -0.9
UBASH3B-205ENST00000529998 TAS1R1Q7RTX1 841 aa9.45□□□□□ -0.9
UBASH3B-205ENST00000529998 ADGRD2Q7Z7M1 963 aa9.45□□□□□ -0.9
UBASH3B-205ENST00000529998 DDX53Q86TM3 631 aaKnown RBP9.45□□□□□ -0.9
UBASH3B-205ENST00000529998 VPS52Q8N1B4 723 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms