RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 GREM2Q9H772 168 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 GOLGA6AQ9NYA3 693 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 EIF2B4Q9UI10 523 aaKnown RBP5.97□□□□□ -1.45
C11orf88-204ENST00000529661 SORCS3Q9UPU3 1222 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 SCAF4O95104 1147 aaKnown RBP5.96□□□□□ -1.46
C11orf88-204ENST00000529661 PF4V1P10720 104 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 ATF3P18847 181 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 VCAM1P19320 739 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 AGXTP21549 392 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 CYP2C19P33261 490 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 CRHR1P34998 444 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 ACVRL1P37023 503 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 PER3P56645 1201 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 ABHD18Q0P651 414 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 MALLQ13021 153 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 VPS72Q15906 364 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 ANKS6Q68DC2 871 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 NAIF1Q69YI7 327 aaPredicted RBP5.96□□□□□ -1.46
C11orf88-204ENST00000529661 HTR3DQ70Z44 454 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 DOK3Q7L591 496 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 CPT1CQ8TCG5 803 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 ZNF483Q8TF39 744 aaPredicted RBP5.96□□□□□ -1.46
C11orf88-204ENST00000529661 HSPBAP1Q96EW2 488 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 CEP95Q96GE4 821 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 SLC2A13Q96QE2 648 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 MMRN2Q9H8L6 949 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 RBM12Q9NTZ6 932 aaKnown RBP5.96□□□□□ -1.46
C11orf88-204ENST00000529661 TRPS1Q9UHF7 1281 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 GPR45Q9Y5Y3 372 aa5.96□□□□□ -1.46
C11orf88-204ENST00000529661 B5MCH6 92 aa5.95□□□□□ -1.46
C11orf88-204ENST00000529661 CYR61O00622 381 aa5.95□□□□□ -1.46
C11orf88-204ENST00000529661 XPOTO43592 962 aaKnown RBP5.95□□□□□ -1.46
C11orf88-204ENST00000529661 CAND2O75155 1236 aa5.95□□□□□ -1.46
C11orf88-204ENST00000529661 RPS6KA4O75676 772 aa5.95□□□□□ -1.46
C11orf88-204ENST00000529661 ZRANB2O95218 330 aaKnown RBP eCLIP5.95□□□□□ -1.46
C11orf88-204ENST00000529661 CT47B1P0C2W7 299 aaPredicted RBP5.95□□□□□ -1.46
C11orf88-204ENST00000529661 GSPT1P15170 499 aaKnown RBP5.95□□□□□ -1.46
C11orf88-204ENST00000529661 APOBEC3AP31941 199 aaPredicted RBP5.95□□□□□ -1.46
C11orf88-204ENST00000529661 MCM7P33993 719 aa5.95□□□□□ -1.46
C11orf88-204ENST00000529661 KLF10Q13118 480 aa5.95□□□□□ -1.46
C11orf88-204ENST00000529661 NOMO1Q15155 1222 aa5.95□□□□□ -1.46
C11orf88-204ENST00000529661 ANO4Q32M45 955 aa5.95□□□□□ -1.46
C11orf88-204ENST00000529661 GFOD2Q3B7J2 385 aa5.95□□□□□ -1.46
C11orf88-204ENST00000529661 MFSD14BQ5SR56 506 aa5.95□□□□□ -1.46
C11orf88-204ENST00000529661 FNDC7Q5VTL7 733 aa5.95□□□□□ -1.46
C11orf88-204ENST00000529661 CCSAPQ6IQ19 270 aaPredicted RBP5.95□□□□□ -1.46
C11orf88-204ENST00000529661 Q6ZVL8 140 aa5.95□□□□□ -1.46
C11orf88-204ENST00000529661 ZNF276Q8N554 614 aa5.95□□□□□ -1.46
C11orf88-204ENST00000529661 RNF169Q8NCN4 708 aa5.95□□□□□ -1.46
C11orf88-204ENST00000529661 TEKT5Q96M29 485 aa5.95□□□□□ -1.46
C11orf88-204ENST00000529661 AIFM3Q96NN9 605 aa5.95□□□□□ -1.46
C11orf88-204ENST00000529661 ING1Q9UK53 422 aaPredicted RBP5.95□□□□□ -1.46
C11orf88-204ENST00000529661 DNM3Q9UQ16 869 aa5.95□□□□□ -1.46
C11orf88-204ENST00000529661 RECQL4O94761 1208 aa5.94□□□□□ -1.46
C11orf88-204ENST00000529661 LPOP22079 712 aaPredicted RBP5.94□□□□□ -1.46
C11orf88-204ENST00000529661 AKAP5P24588 427 aa5.94□□□□□ -1.46
C11orf88-204ENST00000529661 ACAP2Q15057 778 aa5.94□□□□□ -1.46
C11orf88-204ENST00000529661 MAP9Q49MG5 647 aa5.94□□□□□ -1.46
C11orf88-204ENST00000529661 MINDY4Q4G0A6 757 aa5.94□□□□□ -1.46
C11orf88-204ENST00000529661 METTL24Q5JXM2 366 aa5.94□□□□□ -1.46
C11orf88-204ENST00000529661 EFCAB12Q6NXP0 572 aa5.94□□□□□ -1.46
C11orf88-204ENST00000529661 EPM2AIP1Q7L775 607 aaPredicted RBP5.94□□□□□ -1.46
C11orf88-204ENST00000529661 CCDC146Q8IYE0 955 aa5.94□□□□□ -1.46
C11orf88-204ENST00000529661 TRMT2AQ8IZ69 625 aaKnown RBP5.94□□□□□ -1.46
C11orf88-204ENST00000529661 PQLC1Q8N2U9 271 aa5.94□□□□□ -1.46
C11orf88-204ENST00000529661 PPM1NQ8N819 430 aa5.94□□□□□ -1.46
C11orf88-204ENST00000529661 OR7D4Q8NG98 312 aa5.94□□□□□ -1.46
C11orf88-204ENST00000529661 SLC25A43Q8WUT9 341 aaPredicted RBP5.94□□□□□ -1.46
C11orf88-204ENST00000529661 TFAP2CQ92754 450 aa5.94□□□□□ -1.46
C11orf88-204ENST00000529661 CLIP3Q96DZ5 547 aa5.94□□□□□ -1.46
C11orf88-204ENST00000529661 NDC1Q9BTX1 674 aa5.94□□□□□ -1.46
C11orf88-204ENST00000529661 LDAHQ9H6V9 325 aa5.94□□□□□ -1.46
C11orf88-204ENST00000529661 NRDE2Q9H7Z3 1164 aa5.94□□□□□ -1.46
C11orf88-204ENST00000529661 BCO1Q9HAY6 547 aa5.94□□□□□ -1.46
C11orf88-204ENST00000529661 POGKQ9P215 609 aa5.94□□□□□ -1.46
C11orf88-204ENST00000529661 SCOCQ9UIL1 159 aa5.94□□□□□ -1.46
C11orf88-204ENST00000529661 GRXCR1A8MXD5 290 aa5.93□□□□□ -1.46
C11orf88-204ENST00000529661 SLPIP03973 132 aa5.93□□□□□ -1.46
C11orf88-204ENST00000529661 ADH4P08319 380 aa5.93□□□□□ -1.46
C11orf88-204ENST00000529661 MAKP20794 623 aa5.93□□□□□ -1.46
C11orf88-204ENST00000529661 MCAMP43121 646 aa5.93□□□□□ -1.46
C11orf88-204ENST00000529661 FLT3LGP49771 235 aa5.93□□□□□ -1.46
C11orf88-204ENST00000529661 PTTG1IPP53801 180 aa5.93□□□□□ -1.46
C11orf88-204ENST00000529661 PPP3CAQ08209 521 aa5.93□□□□□ -1.46
C11orf88-204ENST00000529661 RRP12Q5JTH9 1297 aaKnown RBP5.93□□□□□ -1.46
C11orf88-204ENST00000529661 GJC2Q5T442 439 aaPredicted RBP5.93□□□□□ -1.46
C11orf88-204ENST00000529661 GPRIN1Q7Z2K8 1008 aa5.93□□□□□ -1.46
C11orf88-204ENST00000529661 CCAR1Q8IX12 1150 aaKnown RBP5.93□□□□□ -1.46
C11orf88-204ENST00000529661 OR10H5Q8NGA6 315 aa5.93□□□□□ -1.46
C11orf88-204ENST00000529661 SLC35B2Q8TB61 432 aa5.93□□□□□ -1.46
C11orf88-204ENST00000529661 NEU4Q8WWR8 484 aaPredicted RBP5.93□□□□□ -1.46
C11orf88-204ENST00000529661 SORCS2Q96PQ0 1159 aa5.93□□□□□ -1.46
C11orf88-204ENST00000529661 SENP6Q9GZR1 1112 aaPredicted RBP5.93□□□□□ -1.46
C11orf88-204ENST00000529661 KCNH6Q9H252 994 aa5.93□□□□□ -1.46
C11orf88-204ENST00000529661 CLCA2Q9UQC9 943 aa5.93□□□□□ -1.46
C11orf88-204ENST00000529661 TBKBP1A7MCY6 615 aa5.92□□□□□ -1.46
C11orf88-204ENST00000529661 LEFTY2O00292 366 aa5.92□□□□□ -1.46
C11orf88-204ENST00000529661 TRIM24O15164 1050 aa5.92□□□□□ -1.46
C11orf88-204ENST00000529661 PEX11BO96011 259 aa5.92□□□□□ -1.46
C11orf88-204ENST00000529661 C5AR1P21730 350 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms