RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 PRG3Q9Y2Y8 225 aaPredicted RBP17.63■□□□□ 0.41
TSPAN4-218ENST00000529566 HIDE1A8MVS5 230 aa17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 HARSP12081 509 aaKnown RBP17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 KCNE1P15382 129 aa17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 ADSSP30520 456 aa17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 LTBRP36941 435 aa17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 AFMP43652 599 aa17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 ASIC1P78348 528 aa17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 CUL4BQ13620 913 aa17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 ZBTB41Q5SVQ8 909 aa17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 VPS52Q8N1B4 723 aa17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 MRPL43Q8N983 215 aaKnown RBP17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 GLIS3Q8NEA6 775 aa17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 ATXN2LQ8WWM7 1075 aaKnown RBP17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 RABGGTAQ92696 567 aa17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 PABPC5Q96DU9 382 aaKnown RBP17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 BLZF1Q9H2G9 400 aa17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 UBE2ZQ9H832 354 aaPredicted RBP17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 CNTN3Q9P232 1028 aa17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 USP25Q9UHP3 1055 aa17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 PCDHB13Q9Y5F0 798 aa17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 TRIP11Q15643 1979 aa17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 VCANP13611 3396 aa17.62■□□□□ 0.41
TSPAN4-218ENST00000529566 C2orf71A6NGG8 1288 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 NCK2O43639 380 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 LILRB3O75022 631 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 GCNT3O95395 438 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 ADRB2P07550 413 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 CLTAP09496 248 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 CTSAP10619 480 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 HOXD13P35453 343 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 TNFSF9P41273 254 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 NRIP1P48552 1158 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 YARSP54577 528 aaKnown RBP17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 ADAM15Q13444 863 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 ALCAMQ13740 583 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 GLRA4Q5JXX5 417 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 PLPP4Q5VZY2 271 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 UNC13DQ70J99 1090 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 EPM2AIP1Q7L775 607 aaPredicted RBP17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 TAS1R1Q7RTX1 841 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 TMC7Q7Z402 723 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 RBM23Q86U06 439 aaKnown RBP17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 CEP57L1Q8IYX8 460 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 FSIP1Q8NA03 581 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 ACCSQ96QU6 501 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 COLEC11Q9BWP8 271 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 ENTPD7Q9NQZ7 604 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 TOPORSQ9NS56 1045 aaPredicted RBP17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 IRAK3Q9Y616 596 aa17.61■□□□□ 0.41
TSPAN4-218ENST00000529566 PVALEFA0A1B0GWK0 134 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 TTC26A0AVF1 554 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 CASTOR2A6NHX0 329 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 PER2O15055 1255 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 OGTO15294 1046 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 LINC01565O15544 149 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 KLRC4O43908 158 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 NR1I2O75469 434 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 CXCL14O95715 111 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 IGFBP6P24592 240 aaPredicted RBP17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 SYKP43405 635 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 SOX4Q06945 474 aaPredicted RBP17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 KCNC3Q14003 757 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 SMC1AQ14683 1233 aaKnown RBP17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 ENOX2Q16206 610 aaKnown RBP17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 DUSP6Q16828 381 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 SLFN12LQ6IEE8 588 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 CD300LGQ6UXG3 332 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 EFHBQ8N7U6 833 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 VN1R2Q8NFZ6 395 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 AUTS2Q8WXX7 1259 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 ASB2Q96Q27 587 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 IGFLR1Q9H665 355 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 TLE6Q9H808 572 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 STK39Q9UEW8 545 aa17.6■□□□□ 0.41
TSPAN4-218ENST00000529566 PRPF6O94906 941 aaKnown RBP17.59■□□□□ 0.41
TSPAN4-218ENST00000529566 GLP2RO95838 553 aa17.59■□□□□ 0.41
TSPAN4-218ENST00000529566 CXCL8P10145 99 aa17.59■□□□□ 0.41
TSPAN4-218ENST00000529566 MATR3P43243 847 aaKnown RBP eCLIP17.59■□□□□ 0.41
TSPAN4-218ENST00000529566 MRPS5P82675 430 aaKnown RBP17.59■□□□□ 0.41
TSPAN4-218ENST00000529566 DLX2Q07687 328 aaPredicted RBP17.59■□□□□ 0.41
TSPAN4-218ENST00000529566 HSP90AA2PQ14568 343 aaPredicted RBP17.59■□□□□ 0.41
TSPAN4-218ENST00000529566 KYAT1Q16773 422 aa17.59■□□□□ 0.41
TSPAN4-218ENST00000529566 PPP2R3CQ969Q6 453 aa17.59■□□□□ 0.41
TSPAN4-218ENST00000529566 MSTO1Q9BUK6 570 aa17.59■□□□□ 0.41
TSPAN4-218ENST00000529566 GPR62Q9BZJ7 368 aa17.59■□□□□ 0.41
TSPAN4-218ENST00000529566 PLEKHA5Q9HAU0 1116 aa17.59■□□□□ 0.41
TSPAN4-218ENST00000529566 CPSF3Q9UKF6 684 aaKnown RBP17.59■□□□□ 0.41
TSPAN4-218ENST00000529566 ADAM28Q9UKQ2 775 aa17.59■□□□□ 0.41
TSPAN4-218ENST00000529566 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.58■□□□□ 0.4
TSPAN4-218ENST00000529566 ZNF202O95125 648 aa17.58■□□□□ 0.4
TSPAN4-218ENST00000529566 KIF4AO95239 1232 aa17.58■□□□□ 0.4
TSPAN4-218ENST00000529566 SOD2P04179 222 aa17.58■□□□□ 0.4
TSPAN4-218ENST00000529566 ANP32AP39687 249 aaKnown RBP17.58■□□□□ 0.4
TSPAN4-218ENST00000529566 RBM10P98175 930 aaKnown RBP17.58■□□□□ 0.4
TSPAN4-218ENST00000529566 PTPN14Q15678 1187 aa17.58■□□□□ 0.4
TSPAN4-218ENST00000529566 ZBTB6Q15916 424 aa17.58■□□□□ 0.4
TSPAN4-218ENST00000529566 UPP1Q16831 310 aa17.58■□□□□ 0.4
TSPAN4-218ENST00000529566 TPRNQ4KMQ1 711 aa17.58■□□□□ 0.4
TSPAN4-218ENST00000529566 FAM26FQ5R3K3 315 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms