RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 TSPAN1O60635 241 aa12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 CYP3A7P24462 503 aa12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 PTENP60484 403 aa12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 PTGDRQ13258 359 aa12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 TUSC3Q13454 348 aa12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 LRRC32Q14392 662 aa12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 FERMT3Q86UX7 667 aa12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 WDR5BQ86VZ2 330 aa12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 IFNLR1Q8IU57 520 aaPredicted RBP12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 RNF149Q8NC42 400 aa12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 ING5Q8WYH8 240 aa12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 TRIM6Q9C030 488 aaPredicted RBP12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 RXFP3Q9NSD7 469 aa12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 BRPF3Q9ULD4 1205 aa12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 PIAS3Q9Y6X2 628 aa12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 FRYQ5TBA9 3013 aa12.95□□□□□ -0.34
AMBRA1-207ENST00000529553 ADAM12O43184 909 aa12.94□□□□□ -0.34
AMBRA1-207ENST00000529553 PSMC3P17980 439 aa12.94□□□□□ -0.34
AMBRA1-207ENST00000529553 FCARP24071 287 aa12.94□□□□□ -0.34
AMBRA1-207ENST00000529553 OR1D2P34982 312 aa12.94□□□□□ -0.34
AMBRA1-207ENST00000529553 QARSP47897 775 aaKnown RBP12.94□□□□□ -0.34
AMBRA1-207ENST00000529553 EXOSC10Q01780 885 aaKnown RBP12.94□□□□□ -0.34
AMBRA1-207ENST00000529553 SRSF5Q13243 272 aaKnown RBP12.94□□□□□ -0.34
AMBRA1-207ENST00000529553 GAS6Q14393 721 aa12.94□□□□□ -0.34
AMBRA1-207ENST00000529553 MXD4Q14582 209 aaPredicted RBP12.94□□□□□ -0.34
AMBRA1-207ENST00000529553 NECTIN1Q15223 517 aa12.94□□□□□ -0.34
AMBRA1-207ENST00000529553 SF3A2Q15428 464 aaKnown RBP12.94□□□□□ -0.34
AMBRA1-207ENST00000529553 PLA2G2CQ5R387 149 aa12.94□□□□□ -0.34
AMBRA1-207ENST00000529553 CEP57Q86XR8 500 aa12.94□□□□□ -0.34
AMBRA1-207ENST00000529553 DEPDC1BQ8WUY9 529 aa12.94□□□□□ -0.34
AMBRA1-207ENST00000529553 TMEM143Q96AN5 459 aa12.94□□□□□ -0.34
AMBRA1-207ENST00000529553 CEP170P1Q96L14 293 aa12.94□□□□□ -0.34
AMBRA1-207ENST00000529553 C22orf23Q9BZE7 217 aa12.94□□□□□ -0.34
AMBRA1-207ENST00000529553 ARRDC1-AS1Q9H2J1 176 aa12.94□□□□□ -0.34
AMBRA1-207ENST00000529553 PCDHGA5Q9Y5G8 931 aa12.94□□□□□ -0.34
AMBRA1-207ENST00000529553 SPEGQ15772 3267 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 CCDC163A0A0D9SF12 145 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 ARHGEF37A1IGU5 675 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 GOLGA8AA7E2F4 631 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 GOLGA8BA8MQT2 603 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 AXIN1O15169 862 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 PRPF3O43395 683 aaKnown RBP12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 EPN2O95208 641 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 AKAP5P24588 427 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 CDC27P30260 824 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 RAP1GAPP47736 663 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 NPEPPSP55786 919 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 SLC5A9Q2M3M2 681 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 FAM78AQ5JUQ0 283 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 DGKKQ5KSL6 1271 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 CREB3L3Q68CJ9 461 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 PLA2G4FQ68DD2 849 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 SLC27A1Q6PCB7 646 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 POTEHQ6S545 545 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 OTUD6AQ7L8S5 288 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 CACNA2D4Q7Z3S7 1137 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 SYNPOQ8N3V7 929 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 RABGGTAQ92696 567 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 CPB2Q96IY4 423 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 ASB16Q96NS5 453 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 APOL6Q9BWW8 343 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 NXF3Q9H4D5 531 aaKnown RBP12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 TRPV4Q9HBA0 871 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 MTRRQ9UBK8 725 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 DAXXQ9UER7 740 aaPredicted RBP12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 WASF3Q9UPY6 502 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 BACE2Q9Y5Z0 518 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 ZFYVE26Q68DK2 2539 aa12.93□□□□□ -0.34
AMBRA1-207ENST00000529553 F5P12259 2224 aa12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 A0A1B0GUA9 196 aa12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 ZNF263O14978 683 aa12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 P4HBP07237 508 aaKnown RBP12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 CEBPBP17676 345 aa12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 FGFR3P22607 806 aa12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 CCNE1P24864 410 aa12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 GDI1P31150 447 aa12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 ADD1P35611 737 aaKnown RBP12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 TFDP1Q14186 410 aa12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 GRM2Q14416 872 aa12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 AMHR2Q16671 573 aa12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 PRSS36Q5K4E3 855 aa12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 MFSD6LQ8IWD5 586 aa12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 ZNF579Q8NAF0 562 aaKnown RBP12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 SMARCD2Q92925 531 aa12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 GJA10Q969M2 543 aa12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 E2F7Q96AV8 911 aa12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 PAAF1Q9BRP4 392 aa12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 TMEM121BQ9BXQ6 578 aaPredicted RBP12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 NFKBIZQ9BYH8 718 aa12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 LSG1Q9H089 658 aaKnown RBP12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 C8orf33Q9H7E9 229 aaPredicted RBP12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 VPS45Q9NRW7 570 aa12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 PARP2Q9UGN5 583 aa12.92□□□□□ -0.34
AMBRA1-207ENST00000529553 SRRM3A6NNA2 597 aaPredicted RBP12.91□□□□□ -0.34
AMBRA1-207ENST00000529553 INO80B-WBP1J3KQ70 363 aa12.91□□□□□ -0.34
AMBRA1-207ENST00000529553 KIF4AO95239 1232 aa12.91□□□□□ -0.34
AMBRA1-207ENST00000529553 THP07101 528 aa12.91□□□□□ -0.34
AMBRA1-207ENST00000529553 ARF4P18085 180 aaPredicted RBP12.91□□□□□ -0.34
AMBRA1-207ENST00000529553 PSAPL1Q6NUJ1 521 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms