RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 TMC5Q6UXY8 1006 aa8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 CCDC149Q6ZUS6 474 aa8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 C1orf186Q6ZWK4 172 aa8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 BRAPQ7Z569 592 aa8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 CDR2LQ86X02 465 aaPredicted RBP8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 FBXL6Q8N531 539 aa8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 C12orf76Q8N812 135 aaPredicted RBP8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 SYT2Q8N9I0 419 aaPredicted RBP8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 TDRD5Q8NAT2 981 aaKnown RBP8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 GSTCDQ8NEC7 633 aa8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 BCL7CQ8WUZ0 217 aaPredicted RBP8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 SPIRE2Q8WWL2 714 aa8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 RIN2Q8WYP3 895 aaPredicted RBP8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 ACAP3Q96P50 834 aa8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 TTPALQ9BTX7 342 aa8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 NXF3Q9H4D5 531 aaKnown RBP8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 PDZD7Q9H5P4 517 aa8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 SLC38A7Q9NVC3 462 aa8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 IGSF9Q9P2J2 1179 aa8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 LARSQ9P2J5 1176 aaKnown RBP8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 LIMD1Q9UGP4 676 aa8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 SORCS3Q9UPU3 1222 aa8.6□□□□□ -1.03
CCDC90B-212ENST00000529312 HIP1RO75146 1068 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 EFEMP2O95967 443 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 MCF2P10911 925 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 PDIA4P13667 645 aaKnown RBP8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 GUCY2CP25092 1073 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 RPL9P32969 192 aaKnown RBP8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 NPTX2P47972 431 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 MTMR3Q13615 1198 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 NBR1Q14596 966 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 HYIQ5T013 277 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 NT5DC1Q5TFE4 455 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 FAM171A1Q5VUB5 890 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 HFE2Q6ZVN8 426 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 TAS1R1Q7RTX1 841 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 CEP57Q86XR8 500 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 PALB2Q86YC2 1186 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 RNF168Q8IYW5 571 aaPredicted RBP8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 KREMEN2Q8NCW0 462 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 BSNDQ8WZ55 320 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 TSPAN18Q96SJ8 248 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 ACO2Q99798 780 aaKnown RBP8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 VN1R3Q9BXE9 311 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 GPR62Q9BZJ7 368 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 CCDC113Q9H0I3 377 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 POMKQ9H5K3 350 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 MARCH5Q9NX47 278 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 ZDHHC7Q9NXF8 308 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 RAPGEFL1Q9UHV5 662 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 GDAQ9Y2T3 454 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 ZFP37Q9Y6Q3 630 aaPredicted RBP8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 PLXNA4Q9HCM2 1894 aa8.59□□□□□ -1.03
CCDC90B-212ENST00000529312 MYO10Q9HD67 2058 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 SMIM28A0A1B0GU29 152 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 VWA3AA6NCI4 1184 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 C2CD4DB7Z1M9 353 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 B4GALT3O60512 393 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 RECQL4O94761 1208 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 B3GAT3O94766 335 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 HNRNPA1P09651 372 aaKnown RBP eCLIP8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 PLA2G4BP0C869 781 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 PLS3P13797 630 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 CDC25AP30304 524 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 LONP1P36776 959 aaKnown RBP8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 GRM5P41594 1212 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 IL17AQ16552 155 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 LILRA6Q6PI73 481 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 ZPBP2Q6X784 338 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 ANKS3Q6ZW76 656 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 RASSF8Q8NHQ8 419 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 PIK3R5Q8WYR1 880 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 SMG7Q92540 1137 aaKnown RBP8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 TBC1D32Q96NH3 1257 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 PRKD2Q9BZL6 878 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 PLEKHA5Q9HAU0 1116 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 POLD4Q9HCU8 107 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 WDR6Q9NNW5 1121 aaKnown RBP8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 MAN1C1Q9NR34 630 aa8.58□□□□□ -1.04
CCDC90B-212ENST00000529312 KIAA1671Q9BY89 1806 aa8.57□□□□□ -1.04
CCDC90B-212ENST00000529312 SFI1A8K8P3 1242 aa8.57□□□□□ -1.04
CCDC90B-212ENST00000529312 H7C4K7 107 aa8.57□□□□□ -1.04
CCDC90B-212ENST00000529312 TMEM189-UBE2V1I3L0A0 370 aa8.57□□□□□ -1.04
CCDC90B-212ENST00000529312 SLC16A4O15374 487 aa8.57□□□□□ -1.04
CCDC90B-212ENST00000529312 CLDN3O15551 220 aa8.57□□□□□ -1.04
CCDC90B-212ENST00000529312 TGM5O43548 720 aa8.57□□□□□ -1.04
CCDC90B-212ENST00000529312 XPOTO43592 962 aaKnown RBP8.57□□□□□ -1.04
CCDC90B-212ENST00000529312 XYLBO75191 536 aa8.57□□□□□ -1.04
CCDC90B-212ENST00000529312 TOM1L1O75674 476 aa8.57□□□□□ -1.04
CCDC90B-212ENST00000529312 ZMYND10O75800 440 aa8.57□□□□□ -1.04
CCDC90B-212ENST00000529312 PAPLNO95428 1278 aa8.57□□□□□ -1.04
CCDC90B-212ENST00000529312 BRD1O95696 1058 aa8.57□□□□□ -1.04
CCDC90B-212ENST00000529312 KRT18P05783 430 aaKnown RBP8.57□□□□□ -1.04
CCDC90B-212ENST00000529312 WEE2P0C1S8 567 aa8.57□□□□□ -1.04
CCDC90B-212ENST00000529312 PAX3P23760 479 aa8.57□□□□□ -1.04
CCDC90B-212ENST00000529312 MARCKSP29966 332 aaPredicted RBP8.57□□□□□ -1.04
CCDC90B-212ENST00000529312 AVPR2P30518 371 aa8.57□□□□□ -1.04
CCDC90B-212ENST00000529312 GBP2P32456 591 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms