RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 NPHP3-ACAD11A0A0J9YXS1 232 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 A0A0U1RQF3 1178 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 DENND3A2RUS2 1198 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 LRRIQ4A6NIV6 560 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 C9IYK1 514 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 INO80B-WBP1J3KQ70 363 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 KIF1CO43896 1103 aaKnown RBP6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 UPP2O95045 317 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 WEE1P30291 646 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 AXLP30530 894 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 FLT3P36888 993 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 PHKA2P46019 1235 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 SARSP49591 514 aaKnown RBP6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 RABGGTBP53611 331 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 PEX3P56589 373 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 PSMC1P62191 440 aaKnown RBP6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 RACK1P63244 317 aaKnown RBP6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 HTRA4P83105 476 aaPredicted RBP6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 MBTD1Q05BQ5 628 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 GIT2Q14161 759 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 DHX8Q14562 1220 aaKnown RBP6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 C4orf46Q504U0 113 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 CDCA2Q69YH5 1023 aaPredicted RBP6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 THSD4Q6ZMP0 1018 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 CATSPER4Q7RTX7 472 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 RETREG3Q86VR2 466 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 GPBP1Q86WP2 473 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 PDILTQ8N807 584 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 IQUBQ8NA54 791 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 LRCH3Q96II8 777 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 ZBED2Q9BTP6 218 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 C2orf40Q9H1Z8 148 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 FZD8Q9H461 694 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 ELAC1Q9H777 363 aaKnown RBP6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 C1orf112Q9NSG2 853 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 DACT1Q9NYF0 836 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 ODF2LQ9ULJ1 636 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 INSL6Q9Y581 213 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 PCDHA11Q9Y5I1 949 aa6.88□□□□□ -1.31
ATPAF1-209ENST00000529214 FAM237AA0A1B0GTK4 181 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 A0A1B0GUA9 196 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 A0A1B0GVL5 298 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 A0A1W2PQ27 194 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 A0A1W2PQ64 194 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 A0A1W2PQD8 194 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 MYMKA6NI61 221 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 CCDC169A6NNP5 214 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 K7ERI5 159 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 POLR2DO15514 142 aaKnown RBP6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 TLL1O43897 1013 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 ZNF623O75123 536 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 DGKIO75912 1065 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 IPO7O95373 1038 aaKnown RBP6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 EOMESO95936 686 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 STAG3L1P0CL83 205 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 PLS3P13797 630 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 MYOGP15173 224 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 MPSTP25325 297 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 STAT6P42226 847 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 NPTX2P47972 431 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 ZNF131P52739 623 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 EFNA5P52803 228 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 SMTNP53814 917 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 NCBP1Q09161 790 aaKnown RBP6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 SERINC3Q13530 473 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 NAA30Q147X3 362 aaPredicted RBP6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 LAPTM4AQ15012 233 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 RAB30Q15771 203 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 FAM187BQ17R55 369 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 L1TD1Q5T7N2 865 aaKnown RBP6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 LYPD8Q6UX82 237 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 ZBTB8OSQ8IWT0 167 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 TTC30BQ8N4P2 665 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 LSM14AQ8ND56 463 aaKnown RBP6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 DEPTORQ8TB45 409 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 KCNN1Q92952 543 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 COL26A1Q96A83 441 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 ZNF689Q96CS4 500 aaPredicted RBP6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 DNAJC19Q96DA6 116 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 IPO9Q96P70 1041 aaKnown RBP6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 NCAPGQ9BPX3 1015 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 REEP2Q9BRK0 252 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 CCDC113Q9H0I3 377 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 CUEDC2Q9H467 287 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 AGPAT5Q9NUQ2 364 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 PRMT7Q9NVM4 692 aaPredicted RBP6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 KBTBD4Q9NVX7 518 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 LARSQ9P2J5 1176 aaKnown RBP6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 CGNQ9P2M7 1197 aaKnown RBP6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 MSRAQ9UJ68 235 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 KCNH3Q9ULD8 1083 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 PIN4Q9Y237 131 aaKnown RBP6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 HPSEQ9Y251 543 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 YBX2Q9Y2T7 364 aaKnown RBP6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 PCDHB7Q9Y5E2 793 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 SIP14410 1827 aa6.87□□□□□ -1.31
ATPAF1-209ENST00000529214 TMEM265A0A087WTH1 108 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 ACKR2O00590 384 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 TSPAN1O60635 241 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 ERLIN2O94905 339 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms