RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 RSAD2Q8WXG1 361 aa17.21■□□□□ 0.35
CTSB-215ENST00000528965 ZSCAN31Q96LW9 406 aaPredicted RBP17.21■□□□□ 0.35
CTSB-215ENST00000528965 UROC1Q96N76 676 aa17.21■□□□□ 0.35
CTSB-215ENST00000528965 PAAF1Q9BRP4 392 aa17.21■□□□□ 0.35
CTSB-215ENST00000528965 BHMT2Q9H2M3 363 aa17.21■□□□□ 0.35
CTSB-215ENST00000528965 SH2B1Q9NRF2 756 aaPredicted RBP17.21■□□□□ 0.35
CTSB-215ENST00000528965 LRWD1Q9UFC0 647 aa17.21■□□□□ 0.35
CTSB-215ENST00000528965 GDAQ9Y2T3 454 aa17.21■□□□□ 0.35
CTSB-215ENST00000528965 PRR23AA6NEV1 266 aa17.2■□□□□ 0.34
CTSB-215ENST00000528965 TMEM189-UBE2V1I3L0A0 370 aa17.2■□□□□ 0.34
CTSB-215ENST00000528965 C8AP07357 584 aa17.2■□□□□ 0.34
CTSB-215ENST00000528965 NPR3P17342 541 aa17.2■□□□□ 0.34
CTSB-215ENST00000528965 YARSP54577 528 aaKnown RBP17.2■□□□□ 0.34
CTSB-215ENST00000528965 ATF7IP2Q5U623 682 aa17.2■□□□□ 0.34
CTSB-215ENST00000528965 SLC44A3Q8N4M1 653 aa17.2■□□□□ 0.34
CTSB-215ENST00000528965 DTWD2Q8NBA8 298 aa17.2■□□□□ 0.34
CTSB-215ENST00000528965 NKD2Q969F2 451 aaPredicted RBP17.2■□□□□ 0.34
CTSB-215ENST00000528965 KIFC3Q9BVG8 833 aa17.2■□□□□ 0.34
CTSB-215ENST00000528965 TOPORSQ9NS56 1045 aaPredicted RBP17.2■□□□□ 0.34
CTSB-215ENST00000528965 CACNG4Q9UBN1 327 aa17.2■□□□□ 0.34
CTSB-215ENST00000528965 TTLL13PA6NNM8 815 aa17.19■□□□□ 0.34
CTSB-215ENST00000528965 TRAPPC3O43617 180 aa17.19■□□□□ 0.34
CTSB-215ENST00000528965 POU2F2P09086 479 aa17.19■□□□□ 0.34
CTSB-215ENST00000528965 DMP1Q13316 513 aaPredicted RBP17.19■□□□□ 0.34
CTSB-215ENST00000528965 HTR4Q13639 388 aa17.19■□□□□ 0.34
CTSB-215ENST00000528965 ANGPT1Q15389 498 aa17.19■□□□□ 0.34
CTSB-215ENST00000528965 EEF1DP3Q658K8 133 aa17.19■□□□□ 0.34
CTSB-215ENST00000528965 FRMD5Q7Z6J6 570 aa17.19■□□□□ 0.34
CTSB-215ENST00000528965 LNX1Q8TBB1 728 aaPredicted RBP17.19■□□□□ 0.34
CTSB-215ENST00000528965 SNX29Q8TEQ0 813 aa17.19■□□□□ 0.34
CTSB-215ENST00000528965 CLSTN3Q9BQT9 956 aa17.19■□□□□ 0.34
CTSB-215ENST00000528965 ARHGEF3Q9NR81 526 aa17.19■□□□□ 0.34
CTSB-215ENST00000528965 CA14Q9ULX7 337 aa17.19■□□□□ 0.34
CTSB-215ENST00000528965 KIAA1024Q9UPX6 916 aa17.19■□□□□ 0.34
CTSB-215ENST00000528965 KIF3AQ9Y496 699 aa17.19■□□□□ 0.34
CTSB-215ENST00000528965 MTCL1Q9Y4B5 1905 aaKnown RBP17.19■□□□□ 0.34
CTSB-215ENST00000528965 ANHXE9PGG2 379 aa17.18■□□□□ 0.34
CTSB-215ENST00000528965 K7ERI5 159 aa17.18■□□□□ 0.34
CTSB-215ENST00000528965 LAD1O00515 517 aa17.18■□□□□ 0.34
CTSB-215ENST00000528965 PI15O43692 258 aa17.18■□□□□ 0.34
CTSB-215ENST00000528965 B3GAT3O94766 335 aa17.18■□□□□ 0.34
CTSB-215ENST00000528965 PDIA5Q14554 519 aa17.18■□□□□ 0.34
CTSB-215ENST00000528965 NAB2Q15742 525 aa17.18■□□□□ 0.34
CTSB-215ENST00000528965 DCLRE1AQ6PJP8 1040 aa17.18■□□□□ 0.34
CTSB-215ENST00000528965 MTSS1LQ765P7 747 aa17.18■□□□□ 0.34
CTSB-215ENST00000528965 RTL10Q7L3V2 364 aa17.18■□□□□ 0.34
CTSB-215ENST00000528965 DRC1Q96MC2 740 aa17.18■□□□□ 0.34
CTSB-215ENST00000528965 CCDC94Q9BW85 323 aaPredicted RBP17.18■□□□□ 0.34
CTSB-215ENST00000528965 TBC1D17Q9HA65 648 aa17.18■□□□□ 0.34
CTSB-215ENST00000528965 SLC2A4RGQ9NR83 387 aa17.18■□□□□ 0.34
CTSB-215ENST00000528965 DDX19AQ9NUU7 478 aaKnown RBP17.18■□□□□ 0.34
CTSB-215ENST00000528965 SLC38A7Q9NVC3 462 aa17.18■□□□□ 0.34
CTSB-215ENST00000528965 CDH7Q9ULB5 785 aa17.18■□□□□ 0.34
CTSB-215ENST00000528965 POLIQ9UNA4 740 aa17.18■□□□□ 0.34
CTSB-215ENST00000528965 TNFSF13BQ9Y275 285 aa17.18■□□□□ 0.34
CTSB-215ENST00000528965 NUMBLQ9Y6R0 609 aa17.18■□□□□ 0.34
CTSB-215ENST00000528965 KRBA1A5PL33 1030 aa17.17■□□□□ 0.34
CTSB-215ENST00000528965 CCDC169A6NNP5 214 aa17.17■□□□□ 0.34
CTSB-215ENST00000528965 FGFR3P22607 806 aa17.17■□□□□ 0.34
CTSB-215ENST00000528965 RAB33AQ14088 237 aa17.17■□□□□ 0.34
CTSB-215ENST00000528965 UVSSAQ2YD98 709 aa17.17■□□□□ 0.34
CTSB-215ENST00000528965 ZNF568Q3ZCX4 644 aa17.17■□□□□ 0.34
CTSB-215ENST00000528965 GLRA4Q5JXX5 417 aa17.17■□□□□ 0.34
CTSB-215ENST00000528965 KRT79Q5XKE5 535 aa17.17■□□□□ 0.34
CTSB-215ENST00000528965 PHLDB3Q6NSJ2 640 aa17.17■□□□□ 0.34
CTSB-215ENST00000528965 ANKS3Q6ZW76 656 aa17.17■□□□□ 0.34
CTSB-215ENST00000528965 ASCL5Q7RTU5 278 aa17.17■□□□□ 0.34
CTSB-215ENST00000528965 GRASPQ7Z6J2 395 aaPredicted RBP17.17■□□□□ 0.34
CTSB-215ENST00000528965 SLC7A14Q8TBB6 771 aa17.17■□□□□ 0.34
CTSB-215ENST00000528965 GPR152Q8TDT2 470 aa17.17■□□□□ 0.34
CTSB-215ENST00000528965 SHDQ96IW2 340 aa17.17■□□□□ 0.34
CTSB-215ENST00000528965 PPP1R10Q96QC0 940 aaKnown RBP17.17■□□□□ 0.34
CTSB-215ENST00000528965 MRPL4Q9BYD3 311 aaKnown RBP17.17■□□□□ 0.34
CTSB-215ENST00000528965 MTRRQ9UBK8 725 aa17.17■□□□□ 0.34
CTSB-215ENST00000528965 DNM3Q9UQ16 869 aa17.17■□□□□ 0.34
CTSB-215ENST00000528965 USP20Q9Y2K6 914 aa17.17■□□□□ 0.34
CTSB-215ENST00000528965 DOCK8Q8NF50 2099 aa17.16■□□□□ 0.34
CTSB-215ENST00000528965 CCL16O15467 120 aa17.16■□□□□ 0.34
CTSB-215ENST00000528965 EDN1P05305 212 aa17.16■□□□□ 0.34
CTSB-215ENST00000528965 GRM5P41594 1212 aa17.16■□□□□ 0.34
CTSB-215ENST00000528965 AXDND1Q5T1B0 1012 aaPredicted RBP17.16■□□□□ 0.34
CTSB-215ENST00000528965 NT5DC1Q5TFE4 455 aa17.16■□□□□ 0.34
CTSB-215ENST00000528965 IGSF22Q8N9C0 903 aa17.16■□□□□ 0.34
CTSB-215ENST00000528965 DDX27Q96GQ7 796 aaKnown RBP17.16■□□□□ 0.34
CTSB-215ENST00000528965 U2AF2P26368 475 aaKnown RBP eCLIP17.15■□□□□ 0.34
CTSB-215ENST00000528965 OR1D2P34982 312 aa17.15■□□□□ 0.34
CTSB-215ENST00000528965 PRPHP41219 470 aa17.15■□□□□ 0.34
CTSB-215ENST00000528965 CLCNKBP51801 687 aa17.15■□□□□ 0.34
CTSB-215ENST00000528965 PEX3P56589 373 aa17.15■□□□□ 0.34
CTSB-215ENST00000528965 PTGDRQ13258 359 aa17.15■□□□□ 0.34
CTSB-215ENST00000528965 NBR1Q14596 966 aa17.15■□□□□ 0.34
CTSB-215ENST00000528965 ECM1Q16610 540 aa17.15■□□□□ 0.34
CTSB-215ENST00000528965 C4orf32Q8N8J7 132 aa17.15■□□□□ 0.34
CTSB-215ENST00000528965 TIPINQ9BVW5 301 aa17.15■□□□□ 0.34
CTSB-215ENST00000528965 CDT1Q9H211 546 aa17.15■□□□□ 0.34
CTSB-215ENST00000528965 TMEM134Q9H6X4 195 aa17.15■□□□□ 0.34
CTSB-215ENST00000528965 C17orf75Q9HAS0 396 aa17.15■□□□□ 0.34
CTSB-215ENST00000528965 KMT5AQ9NQR1 393 aa17.15■□□□□ 0.34
CTSB-215ENST00000528965 KCNH3Q9ULD8 1083 aa17.15■□□□□ 0.34
CTSB-215ENST00000528965 RBM19Q9Y4C8 960 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms