RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 ACER1Q8TDN7 264 aa19.02■□□□□ 0.63
LTBP3-210ENST00000528516 MCUR1Q96AQ8 359 aa19.02■□□□□ 0.63
LTBP3-210ENST00000528516 ACCSQ96QU6 501 aa19.02■□□□□ 0.63
LTBP3-210ENST00000528516 STOML1Q9UBI4 398 aa19.02■□□□□ 0.63
LTBP3-210ENST00000528516 ANAPC5Q9UJX4 755 aa19.02■□□□□ 0.63
LTBP3-210ENST00000528516 EPHB2P29323 1055 aa19.01■□□□□ 0.63
LTBP3-210ENST00000528516 BRDTQ58F21 947 aaPredicted RBP19.01■□□□□ 0.63
LTBP3-210ENST00000528516 C16orf86Q6ZW13 317 aa19.01■□□□□ 0.63
LTBP3-210ENST00000528516 TTC8Q8TAM2 541 aa19.01■□□□□ 0.63
LTBP3-210ENST00000528516 RILPQ96NA2 401 aa19.01■□□□□ 0.63
LTBP3-210ENST00000528516 RUNDC3BQ96NL0 473 aa19.01■□□□□ 0.63
LTBP3-210ENST00000528516 BCL9LQ86UU0 1499 aa19.01■□□□□ 0.63
LTBP3-210ENST00000528516 SPATA31A6Q5VVP1 1343 aa19.01■□□□□ 0.63
LTBP3-210ENST00000528516 MKRN3Q13064 507 aaKnown RBP19.01■□□□□ 0.63
LTBP3-210ENST00000528516 CDO1Q16878 200 aa19.01■□□□□ 0.63
LTBP3-210ENST00000528516 LRRC55Q6ZSA7 311 aa19.01■□□□□ 0.63
LTBP3-210ENST00000528516 ALG13Q9NP73 1137 aaKnown RBP19.01■□□□□ 0.63
LTBP3-210ENST00000528516 RAB20Q9NX57 234 aa19.01■□□□□ 0.63
LTBP3-210ENST00000528516 SUCLA2Q9P2R7 463 aaPredicted RBP19.01■□□□□ 0.63
LTBP3-210ENST00000528516 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.01■□□□□ 0.63
LTBP3-210ENST00000528516 DENND3A2RUS2 1198 aa19.01■□□□□ 0.63
LTBP3-210ENST00000528516 PIK3R2O00459 728 aa19.01■□□□□ 0.63
LTBP3-210ENST00000528516 UBTFL6P0CB48 400 aaPredicted RBP19.01■□□□□ 0.63
LTBP3-210ENST00000528516 MAN1A1P33908 653 aa19.01■□□□□ 0.63
LTBP3-210ENST00000528516 SHROOM1Q2M3G4 852 aaPredicted RBP19.01■□□□□ 0.63
LTBP3-210ENST00000528516 ARHGEF18Q6ZSZ5 1173 aa19.01■□□□□ 0.63
LTBP3-210ENST00000528516 VPS52Q8N1B4 723 aa19.01■□□□□ 0.63
LTBP3-210ENST00000528516 SLC35G2Q8TBE7 412 aa19.01■□□□□ 0.63
LTBP3-210ENST00000528516 MAIP1Q8WWC4 291 aa19.01■□□□□ 0.63
LTBP3-210ENST00000528516 TYW1Q9NV66 732 aaKnown RBP19.01■□□□□ 0.63
LTBP3-210ENST00000528516 ALADP13716 330 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 GAP43P17677 238 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 SP100P23497 879 aaPredicted RBP19■□□□□ 0.63
LTBP3-210ENST00000528516 DYNC1I2Q13409 638 aaKnown RBP19■□□□□ 0.63
LTBP3-210ENST00000528516 MTMR1Q13613 665 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 AUHQ13825 339 aaKnown RBP19■□□□□ 0.63
LTBP3-210ENST00000528516 Q3C1V9 767 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 EXOC3L1Q86VI1 746 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 ZFPM1Q8IX07 1006 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 PROM2Q8N271 834 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 VTI1AQ96AJ9 217 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 SMC6Q96SB8 1091 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 ZWILCHQ9H900 591 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 GPRC5CQ9NQ84 441 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 CYP39A1Q9NYL5 469 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 LTBP4Q8N2S1 1624 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 NID2Q14112 1375 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 CES2O00748 559 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 UNC5CO95185 931 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 GH1P01241 217 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 NUDT17P0C025 328 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 TMEM191BP0C7N4 346 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 YWHAGP61981 247 aaKnown RBP eCLIP19■□□□□ 0.63
LTBP3-210ENST00000528516 BBS9Q3SYG4 887 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 TRIM74Q86UV6 250 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 TRIM73Q86UV7 250 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 AGGF1Q8N302 714 aaeCLIP19■□□□□ 0.631e-7■■■□□ 18.5
LTBP3-210ENST00000528516 C7orf31Q8N865 590 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 CTNNAL1Q9UBT7 734 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 FAM187AA6NFU0 413 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 TMEM270Q6UE05 265 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 RFX8Q6ZV50 586 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 SULF1Q8IWU6 871 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 SCYL3Q8IZE3 742 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 DRAXINQ8NBI3 349 aaPredicted RBP19■□□□□ 0.63
LTBP3-210ENST00000528516 UCMAQ8WVF2 138 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 CEP63Q96MT8 703 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 INTS2Q9H0H0 1204 aaKnown RBP19■□□□□ 0.63
LTBP3-210ENST00000528516 ADAM7Q9H2U9 754 aa19■□□□□ 0.63
LTBP3-210ENST00000528516 TMEM150BA6NC51 233 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 MAPK13O15264 365 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 RNF8O76064 485 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 CYP11B2P19099 503 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 BASP1P80723 227 aaKnown RBP18.99■□□□□ 0.63
LTBP3-210ENST00000528516 IL9RQ01113 521 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 IFRD2Q12894 506 aaPredicted RBP18.99■□□□□ 0.63
LTBP3-210ENST00000528516 PSMD6Q15008 389 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 AADACL2Q6P093 401 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 CDR2LQ86X02 465 aaPredicted RBP18.99■□□□□ 0.63
LTBP3-210ENST00000528516 FAM81AQ8TBF8 368 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 NLRP4Q96MN2 994 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 MYLK2Q9H1R3 596 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 O00370 1275 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 PFDN1O60925 122 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 ZCCHC18P0CG32 403 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 MAPK7Q13164 816 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 SEZ6Q53EL9 994 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 UBAP2Q5T6F2 1119 aaKnown RBP18.99■□□□□ 0.63
LTBP3-210ENST00000528516 XXYLT1Q8NBI6 393 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 RNF169Q8NCN4 708 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 C9orf72Q96LT7 481 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 RUSC1Q9BVN2 902 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 PCSK1NQ9UHG2 260 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 COMMD10Q9Y6G5 202 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 ATRNO75882 1429 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 PTENP60484 403 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 COG2Q14746 738 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 CCDC137Q6PK04 289 aaKnown RBP18.99■□□□□ 0.63
LTBP3-210ENST00000528516 NT5DC3Q86UY8 548 aa18.99■□□□□ 0.63
LTBP3-210ENST00000528516 RIC1Q4ADV7 1423 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms