RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 OR52N2Q8NGI0 321 aa7.52□□□□□ -1.21
PCF11-202ENST00000528336 TFAP2CQ92754 450 aa7.52□□□□□ -1.21
PCF11-202ENST00000528336 CLPTM1LQ96KA5 538 aa7.52□□□□□ -1.21
PCF11-202ENST00000528336 LRGUKQ96M69 825 aa7.52□□□□□ -1.21
PCF11-202ENST00000528336 MYOCQ99972 504 aa7.52□□□□□ -1.21
PCF11-202ENST00000528336 C1QTNF3Q9BXJ4 246 aa7.52□□□□□ -1.21
PCF11-202ENST00000528336 CDH19Q9H159 772 aa7.52□□□□□ -1.21
PCF11-202ENST00000528336 KLHL42Q9P2K6 505 aa7.52□□□□□ -1.21
PCF11-202ENST00000528336 TCEAL9Q9UHQ7 104 aa7.52□□□□□ -1.21
PCF11-202ENST00000528336 NOB1Q9ULX3 412 aaKnown RBP7.52□□□□□ -1.21
PCF11-202ENST00000528336 NCANO14594 1321 aa7.52□□□□□ -1.21
PCF11-202ENST00000528336 POU2F2P09086 479 aa7.51□□□□□ -1.21
PCF11-202ENST00000528336 ATP5JP18859 108 aa7.51□□□□□ -1.21
PCF11-202ENST00000528336 VCAM1P19320 739 aa7.51□□□□□ -1.21
PCF11-202ENST00000528336 MTM1Q13496 603 aa7.51□□□□□ -1.21
PCF11-202ENST00000528336 CSRP2Q16527 193 aa7.51□□□□□ -1.21
PCF11-202ENST00000528336 BMT2Q1RMZ1 405 aa7.51□□□□□ -1.21
PCF11-202ENST00000528336 NRN1LQ496H8 165 aa7.51□□□□□ -1.21
PCF11-202ENST00000528336 C1QL3Q5VWW1 255 aa7.51□□□□□ -1.21
PCF11-202ENST00000528336 PPP4R3AQ6IN85 833 aa7.51□□□□□ -1.21
PCF11-202ENST00000528336 EFCAB12Q6NXP0 572 aa7.51□□□□□ -1.21
PCF11-202ENST00000528336 DRC7Q8IY82 874 aa7.51□□□□□ -1.21
PCF11-202ENST00000528336 EXTL1Q92935 676 aa7.51□□□□□ -1.21
PCF11-202ENST00000528336 PSMD1Q99460 953 aa7.51□□□□□ -1.21
PCF11-202ENST00000528336 TSC22D4Q9Y3Q8 395 aa7.51□□□□□ -1.21
PCF11-202ENST00000528336 TESMINQ9Y4I5 508 aa7.51□□□□□ -1.21
PCF11-202ENST00000528336 KLRG2A4D1S0 409 aaPredicted RBP7.5□□□□□ -1.21
PCF11-202ENST00000528336 GOLGA6L6A8MZA4 724 aa7.5□□□□□ -1.21
PCF11-202ENST00000528336 PLSCR1O15162 318 aa7.5□□□□□ -1.21
PCF11-202ENST00000528336 ACRV1P26436 265 aa7.5□□□□□ -1.21
PCF11-202ENST00000528336 FXR1P51114 621 aaKnown RBP eCLIP7.5□□□□□ -1.21
PCF11-202ENST00000528336 CLRN1P58418 232 aa7.5□□□□□ -1.21
PCF11-202ENST00000528336 CDC42EP1Q00587 391 aa7.5□□□□□ -1.21
PCF11-202ENST00000528336 PPP2R5AQ15172 486 aa7.5□□□□□ -1.21
PCF11-202ENST00000528336 VPS72Q15906 364 aa7.5□□□□□ -1.21
PCF11-202ENST00000528336 USP39Q53GS9 565 aaKnown RBP7.5□□□□□ -1.21
PCF11-202ENST00000528336 USP45Q70EL2 814 aa7.5□□□□□ -1.21
PCF11-202ENST00000528336 GPRIN1Q7Z2K8 1008 aa7.5□□□□□ -1.21
PCF11-202ENST00000528336 C1orf210Q8IVY1 113 aa7.5□□□□□ -1.21
PCF11-202ENST00000528336 CHPFQ8IZ52 775 aa7.5□□□□□ -1.21
PCF11-202ENST00000528336 SH3RF3Q8TEJ3 882 aaPredicted RBP7.5□□□□□ -1.21
PCF11-202ENST00000528336 CASKIN2Q8WXE0 1202 aa7.5□□□□□ -1.21
PCF11-202ENST00000528336 PHACTR3Q96KR7 559 aa7.5□□□□□ -1.21
PCF11-202ENST00000528336 NUP88Q99567 741 aaPredicted RBP7.5□□□□□ -1.21
PCF11-202ENST00000528336 GTPBP4Q9BZE4 634 aaKnown RBP7.5□□□□□ -1.21
PCF11-202ENST00000528336 BCCIPQ9P287 314 aaKnown RBP eCLIP7.5□□□□□ -1.21
PCF11-202ENST00000528336 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.5□□□□□ -1.21
PCF11-202ENST00000528336 PNPLA7Q6ZV29 1317 aa7.5□□□□□ -1.21
PCF11-202ENST00000528336 PJA2O43164 708 aa7.49□□□□□ -1.21
PCF11-202ENST00000528336 ADRB1P08588 477 aa7.49□□□□□ -1.21
PCF11-202ENST00000528336 SNRPA1P09661 255 aaKnown RBP7.49□□□□□ -1.21
PCF11-202ENST00000528336 AKAP5P24588 427 aa7.49□□□□□ -1.21
PCF11-202ENST00000528336 ATP8B2P98198 1209 aa7.49□□□□□ -1.21
PCF11-202ENST00000528336 DSC2Q02487 901 aa7.49□□□□□ -1.21
PCF11-202ENST00000528336 NFE2Q16621 373 aaPredicted RBP7.49□□□□□ -1.21
PCF11-202ENST00000528336 ATXN7L2Q5T6C5 722 aaPredicted RBP7.49□□□□□ -1.21
PCF11-202ENST00000528336 IFIT1BQ5T764 474 aaKnown RBP7.49□□□□□ -1.21
PCF11-202ENST00000528336 ZNF529Q6P280 563 aa7.49□□□□□ -1.21
PCF11-202ENST00000528336 GADL1Q6ZQY3 521 aa7.49□□□□□ -1.21
PCF11-202ENST00000528336 OR10H5Q8NGA6 315 aa7.49□□□□□ -1.21
PCF11-202ENST00000528336 ZFP28Q8NHY6 868 aa7.49□□□□□ -1.21
PCF11-202ENST00000528336 SLC23A1Q9UHI7 598 aa7.49□□□□□ -1.21
PCF11-202ENST00000528336 PNMA8BQ9ULN7 279 aaPredicted RBP7.49□□□□□ -1.21
PCF11-202ENST00000528336 CLCA2Q9UQC9 943 aa7.49□□□□□ -1.21
PCF11-202ENST00000528336 CFAP20Q9Y6A4 193 aaKnown RBP7.49□□□□□ -1.21
PCF11-202ENST00000528336 XDHP47989 1333 aa7.49□□□□□ -1.21
PCF11-202ENST00000528336 KRTAP23-1A1A580 65 aa7.48□□□□□ -1.21
PCF11-202ENST00000528336 TEX33O43247 280 aa7.48□□□□□ -1.21
PCF11-202ENST00000528336 AP1G1O43747 822 aa7.48□□□□□ -1.21
PCF11-202ENST00000528336 SGTAO43765 313 aa7.48□□□□□ -1.21
PCF11-202ENST00000528336 DTNBO60941 627 aa7.48□□□□□ -1.21
PCF11-202ENST00000528336 SCGB1D2O95969 90 aa7.48□□□□□ -1.21
PCF11-202ENST00000528336 RPLP2P05387 115 aaKnown RBP7.48□□□□□ -1.21
PCF11-202ENST00000528336 CYP2C19P33261 490 aa7.48□□□□□ -1.21
PCF11-202ENST00000528336 PTTG1IPP53801 180 aa7.48□□□□□ -1.21
PCF11-202ENST00000528336 ZNF280AP59817 542 aaPredicted RBP7.48□□□□□ -1.21
PCF11-202ENST00000528336 CREMQ03060 361 aa7.48□□□□□ -1.21
PCF11-202ENST00000528336 DCAF17Q5H9S7 520 aaPredicted RBP7.48□□□□□ -1.21
PCF11-202ENST00000528336 UBE3BQ7Z3V4 1068 aa7.48□□□□□ -1.21
PCF11-202ENST00000528336 SPRED1Q7Z699 444 aa7.48□□□□□ -1.21
PCF11-202ENST00000528336 TTC7BQ86TV6 843 aa7.48□□□□□ -1.21
PCF11-202ENST00000528336 TICAM2Q86XR7 235 aa7.48□□□□□ -1.21
PCF11-202ENST00000528336 GRAMD1CQ8IYS0 662 aa7.48□□□□□ -1.21
PCF11-202ENST00000528336 PRR18Q8N4B5 295 aa7.48□□□□□ -1.21
PCF11-202ENST00000528336 IFI44Q8TCB0 444 aa7.48□□□□□ -1.21
PCF11-202ENST00000528336 TCRBV7S2A1N4TA0A589 114 aa7.47□□□□□ -1.21
PCF11-202ENST00000528336 LRRC14BA6NHZ5 514 aa7.47□□□□□ -1.21
PCF11-202ENST00000528336 KIAA0391O15091 583 aaKnown RBP7.47□□□□□ -1.21
PCF11-202ENST00000528336 CTXN1P60606 82 aa7.47□□□□□ -1.21
PCF11-202ENST00000528336 ZNF267Q14586 743 aaPredicted RBP7.47□□□□□ -1.21
PCF11-202ENST00000528336 KHDC1Q4VXA5 237 aaKnown RBP7.47□□□□□ -1.21
PCF11-202ENST00000528336 METTL24Q5JXM2 366 aa7.47□□□□□ -1.21
PCF11-202ENST00000528336 OTUD7BQ6GQQ9 843 aa7.47□□□□□ -1.21
PCF11-202ENST00000528336 TMPRSS6Q8IU80 811 aa7.47□□□□□ -1.21
PCF11-202ENST00000528336 IL17DQ8TAD2 202 aa7.47□□□□□ -1.21
PCF11-202ENST00000528336 NSUN6Q8TEA1 469 aaKnown RBP7.47□□□□□ -1.21
PCF11-202ENST00000528336 MRGPRX4Q96LA9 322 aa7.47□□□□□ -1.21
PCF11-202ENST00000528336 CAMKK2Q96RR4 588 aa7.47□□□□□ -1.21
PCF11-202ENST00000528336 DMRTA2Q96SC8 542 aa7.47□□□□□ -1.21
PCF11-202ENST00000528336 VRK1Q99986 396 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms