RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 MAP7D3Q8IWC1 876 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 STX18Q9P2W9 335 aaKnown RBP13.29□□□□□ -0.28
TSKU-203ENST00000527881 ZNF212Q9UDV6 495 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 RPL26L1Q9UNX3 145 aaKnown RBP13.29□□□□□ -0.28
TSKU-203ENST00000527881 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.29□□□□□ -0.28
TSKU-203ENST00000527881 TIAM2Q8IVF5 1701 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 FER1L4A9Z1Z3 1794 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 FXR2P51116 673 aaKnown RBP eCLIP13.29□□□□□ -0.28
TSKU-203ENST00000527881 TMEM62Q0P6H9 643 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 EDRF1Q3B7T1 1238 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 PABPC1LQ4VXU2 614 aaKnown RBP13.29□□□□□ -0.28
TSKU-203ENST00000527881 NSMFQ6X4W1 530 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 OTOAQ7RTW8 1153 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 DGKHQ86XP1 1220 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 SLC44A5Q8NCS7 719 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 NSL1Q96IY1 281 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 NR1H4Q96RI1 486 aaPredicted RBP13.29□□□□□ -0.28
TSKU-203ENST00000527881 KCTD10Q9H3F6 313 aa13.29□□□□□ -0.28
TSKU-203ENST00000527881 MROH7Q68CQ1 1323 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 ZBED4O75132 1171 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 SUPT3HO75486 399 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 ZNF189O75820 626 aaPredicted RBP13.28□□□□□ -0.28
TSKU-203ENST00000527881 NR3C1P04150 777 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 VAV1P15498 845 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 ITIH2P19823 946 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 RPA3P35244 121 aaPredicted RBP13.28□□□□□ -0.28
TSKU-203ENST00000527881 CDK7P50613 346 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 INHBCP55103 352 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 MOGSQ13724 837 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 SLC45A4Q5BKX6 768 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 MDH1BQ5I0G3 518 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 ZFYVE27Q5T4F4 411 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 PPP4R3CPQ6ZMV5 832 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 RASSF3Q86WH2 238 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 C10orf82Q8WW14 230 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 AAASQ9NRG9 546 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 IL17RBQ9NRM6 502 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 DDX18Q9NVP1 670 aaKnown RBP13.28□□□□□ -0.28
TSKU-203ENST00000527881 ZNF711Q9Y462 761 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 SLC4A7Q9Y6M7 1214 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 NCANO14594 1321 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 ADGRA3Q8IWK6 1321 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 PCDH11YQ9BZA8 1340 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 MEIS1O00470 390 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 HNRNPCL1O60812 293 aaKnown RBP13.28□□□□□ -0.28
TSKU-203ENST00000527881 USP1O94782 785 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 CTNNA2P26232 953 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 MARSP56192 900 aaKnown RBP13.28□□□□□ -0.28
TSKU-203ENST00000527881 PABPC4Q13310 644 aaKnown RBP eCLIP13.28□□□□□ -0.284e-8■■■□□ 16
TSKU-203ENST00000527881 KNOP1Q1ED39 458 aaKnown RBP13.28□□□□□ -0.28
TSKU-203ENST00000527881 LVRNQ6Q4G3 990 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 SFR1Q86XK3 245 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 LENG1Q96BZ8 264 aaPredicted RBP13.28□□□□□ -0.28
TSKU-203ENST00000527881 PLVAPQ9BX97 442 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 KRT82Q9NSB4 513 aa13.28□□□□□ -0.28
TSKU-203ENST00000527881 DDX25Q9UHL0 483 aaKnown RBP13.28□□□□□ -0.28
TSKU-203ENST00000527881 WTIPA6NIX2 430 aaPredicted RBP13.27□□□□□ -0.28
TSKU-203ENST00000527881 AMPD1P23109 780 aa13.27□□□□□ -0.28
TSKU-203ENST00000527881 ADCY7P51828 1080 aa13.27□□□□□ -0.28
TSKU-203ENST00000527881 COG7P83436 770 aa13.27□□□□□ -0.28
TSKU-203ENST00000527881 SFSWAPQ12872 951 aaKnown RBP13.27□□□□□ -0.28
TSKU-203ENST00000527881 LSAMPQ13449 338 aa13.27□□□□□ -0.28
TSKU-203ENST00000527881 STAT4Q14765 748 aa13.27□□□□□ -0.28
TSKU-203ENST00000527881 CPNE8Q86YQ8 564 aa13.27□□□□□ -0.28
TSKU-203ENST00000527881 SLC25A41Q8N5S1 370 aa13.27□□□□□ -0.28
TSKU-203ENST00000527881 RDH13Q8NBN7 331 aa13.27□□□□□ -0.28
TSKU-203ENST00000527881 NAT14Q8WUY8 206 aa13.27□□□□□ -0.28
TSKU-203ENST00000527881 TMEM47Q9BQJ4 181 aa13.27□□□□□ -0.28
TSKU-203ENST00000527881 DNAJC18Q9H819 358 aa13.27□□□□□ -0.28
TSKU-203ENST00000527881 SAR1AQ9NR31 198 aa13.27□□□□□ -0.28
TSKU-203ENST00000527881 FBXO6Q9NRD1 293 aaPredicted RBP13.27□□□□□ -0.28
TSKU-203ENST00000527881 BAZ2AQ9UIF9 1905 aaKnown RBP13.27□□□□□ -0.29
TSKU-203ENST00000527881 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.27□□□□□ -0.29
TSKU-203ENST00000527881 GGPS1O95749 300 aa13.27□□□□□ -0.29
TSKU-203ENST00000527881 CHRNB2P17787 502 aa13.27□□□□□ -0.29
TSKU-203ENST00000527881 R3HDM1Q15032 1099 aaKnown RBP13.27□□□□□ -0.29
TSKU-203ENST00000527881 UBE2SQ16763 222 aa13.27□□□□□ -0.29
TSKU-203ENST00000527881 SMC1BQ8NDV3 1235 aa13.27□□□□□ -0.29
TSKU-203ENST00000527881 MTMR9Q96QG7 549 aa13.27□□□□□ -0.29
TSKU-203ENST00000527881 TRIM55Q9BYV6 548 aa13.27□□□□□ -0.29
TSKU-203ENST00000527881 WHRNQ9P202 907 aa13.27□□□□□ -0.29
TSKU-203ENST00000527881 ANKFY1Q9P2R3 1169 aa13.27□□□□□ -0.29
TSKU-203ENST00000527881 TJP1Q07157 1748 aa13.27□□□□□ -0.29
TSKU-203ENST00000527881 ASMTLO95671 621 aa13.27□□□□□ -0.29
TSKU-203ENST00000527881 PENKP01210 267 aaPredicted RBP13.27□□□□□ -0.29
TSKU-203ENST00000527881 ITGA2BP08514 1039 aa13.27□□□□□ -0.29
TSKU-203ENST00000527881 PLS3P13797 630 aa13.27□□□□□ -0.29
TSKU-203ENST00000527881 GJC1P36383 396 aa13.27□□□□□ -0.29
TSKU-203ENST00000527881 ARFIP2P53365 341 aa13.27□□□□□ -0.29
TSKU-203ENST00000527881 PKN2Q16513 984 aaKnown RBP13.27□□□□□ -0.29
TSKU-203ENST00000527881 SLC20A1Q8WUM9 679 aa13.27□□□□□ -0.29
TSKU-203ENST00000527881 ECSITQ9BQ95 431 aa13.27□□□□□ -0.29
TSKU-203ENST00000527881 RMI1Q9H9A7 625 aa13.27□□□□□ -0.29
TSKU-203ENST00000527881 SAYSD1Q9NPB0 183 aa13.27□□□□□ -0.29
TSKU-203ENST00000527881 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.27□□□□□ -0.29
TSKU-203ENST00000527881 PDLIM1O00151 329 aa13.26□□□□□ -0.29
TSKU-203ENST00000527881 PGM3O95394 542 aa13.26□□□□□ -0.29
TSKU-203ENST00000527881 FAM163BP0C2L3 166 aa13.26□□□□□ -0.29
TSKU-203ENST00000527881 POTEJP0CG39 1038 aa13.26□□□□□ -0.29
TSKU-203ENST00000527881 PDK4Q16654 411 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms