RNA–Protein interactions for RNA: ENST00000527818.1

AP000708.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000708.1, Length 3,423 nt, Biotype bidirectional promoter lncRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000708.1-201ENST00000527818 GREB1LQ9C091 1923 aaPredicted RBP11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 EDF1O60869 148 aaKnown RBP11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 TBX10O75333 385 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 RRM1P23921 792 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 SMARCA1P28370 1054 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 NMT1P30419 496 aaKnown RBP11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 DLG4P78352 724 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 SF3B3Q15393 1217 aaKnown RBP11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 DAB2IPQ5VWQ8 1189 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 ADGRF4Q8IZF3 695 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 ETNPPLQ8TBG4 499 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 C9orf72Q96LT7 481 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 PAIP2Q9BPZ3 127 aaKnown RBP11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 RTFDC1Q9BY42 306 aaPredicted RBP11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 ADAM33Q9BZ11 813 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 BMP2KQ9NSY1 1161 aaPredicted RBP11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 WASF2Q9Y6W5 498 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 TOM1O60784 492 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 ECEL1O95672 775 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 KRT18P05783 430 aaKnown RBP11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 MUTP22033 750 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 RPA3P35244 121 aaPredicted RBP11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 SLC16A2P36021 539 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 TCEAL1Q15170 157 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 RCN1Q15293 331 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 PDCD2Q16342 344 aaPredicted RBP11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 WDR72Q3MJ13 1102 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 SNX30Q5VWJ9 437 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 CCDC24Q8N4L8 307 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 SYT2Q8N9I0 419 aaPredicted RBP11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 SLCO2A1Q92959 643 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 RBM41Q96IZ5 413 aaKnown RBP11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 GPR101Q96P66 508 aaPredicted RBP11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 FIZ1Q96SL8 496 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 CCDC87Q9NVE4 849 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 USH1CQ9Y6N9 552 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 ADAMTSL1Q8N6G6 1762 aa11.24□□□□□ -0.61
AP000708.1-201ENST00000527818 ZBTB39O15060 712 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 CALUO43852 315 aaPredicted RBP11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 SNHG28P0DPA3 235 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 TNFAIP3P21580 790 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 CACNA2D1P54289 1103 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 KPNB1Q14974 876 aaKnown RBP11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 TMED2Q15363 201 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 MUM1Q2TAK8 710 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 OTOAQ7RTW8 1153 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 ANKS1BQ7Z6G8 1248 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 ZNF276Q8N554 614 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 RFWD2Q8NHY2 731 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 LENG9Q96B70 501 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 PTCD3Q96EY7 689 aaKnown RBP11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 APEX2Q9UBZ4 518 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 RPS6KL1Q9Y6S9 549 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 MIF4GDA9UHW6 222 aaKnown RBP11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 GCNT3O95395 438 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 SLURP2P0DP57 97 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 TAL1P17542 331 aaPredicted RBP11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 STRN3Q13033 797 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 NSMFQ6X4W1 530 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 FAM186BQ8IYM0 893 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 C12orf65Q9H3J6 166 aaKnown RBP11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 ARL8BQ9NVJ2 186 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 TJP3O95049 919 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 VPS41P49754 854 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 MAPK6Q16659 721 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 ARHGEF18Q6ZSZ5 1173 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 BRINP3Q76B58 766 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 ZNF804AQ7Z570 1209 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 ARHGAP22Q7Z5H3 698 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 CLNKQ7Z7G1 428 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 MTDHQ86UE4 582 aaKnown RBP11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 TRABD2AQ86V40 505 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 RPUSD2Q8IZ73 545 aaKnown RBP11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 UBL4BQ8N7F7 174 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 ZSWIM2Q8NEG5 633 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 CRYGNQ8WXF5 182 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 TIPINQ9BVW5 301 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 TRIM4Q9C037 500 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 SLAIN2Q9P270 581 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 LNPEPQ9UIQ6 1025 aa11.23□□□□□ -0.61
AP000708.1-201ENST00000527818 FAM47DPA6NHR8 397 aa11.22□□□□□ -0.61
AP000708.1-201ENST00000527818 THAP12O43422 761 aa11.22□□□□□ -0.61
AP000708.1-201ENST00000527818 EXOC3O60645 756 aa11.22□□□□□ -0.61
AP000708.1-201ENST00000527818 SGPL1O95470 568 aa11.22□□□□□ -0.61
AP000708.1-201ENST00000527818 GGPS1O95749 300 aa11.22□□□□□ -0.61
AP000708.1-201ENST00000527818 HSPA6P17066 643 aa11.22□□□□□ -0.61
AP000708.1-201ENST00000527818 KCNA3P22001 575 aa11.22□□□□□ -0.61
AP000708.1-201ENST00000527818 ADSSP30520 456 aa11.22□□□□□ -0.61
AP000708.1-201ENST00000527818 VHLP40337 213 aa11.22□□□□□ -0.61
AP000708.1-201ENST00000527818 PTK6Q13882 451 aa11.22□□□□□ -0.61
AP000708.1-201ENST00000527818 FASTKD3Q14CZ7 662 aaKnown RBP11.22□□□□□ -0.61
AP000708.1-201ENST00000527818 PABPC1LQ4VXU2 614 aaKnown RBP11.22□□□□□ -0.61
AP000708.1-201ENST00000527818 SEL1L2Q5TEA6 688 aa11.22□□□□□ -0.61
AP000708.1-201ENST00000527818 NOP9Q86U38 636 aaKnown RBP11.22□□□□□ -0.61
AP000708.1-201ENST00000527818 RHOT2Q8IXI1 618 aa11.22□□□□□ -0.61
AP000708.1-201ENST00000527818 SHKBP1Q8TBC3 707 aa11.22□□□□□ -0.61
AP000708.1-201ENST00000527818 SH3TC2Q8TF17 1288 aa11.22□□□□□ -0.61
AP000708.1-201ENST00000527818 DCLRE1BQ9H816 532 aa11.22□□□□□ -0.61
AP000708.1-201ENST00000527818 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.22□□□□□ -0.61
AP000708.1-201ENST00000527818 ARHGEF4Q9NR80 690 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms