RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 VPS11Q9H270 941 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 TAF1DQ9H5J8 278 aaPredicted RBP7.63□□□□□ -1.19
CTNND1-216ENST00000527467 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.63□□□□□ -1.19
CTNND1-216ENST00000527467 WBP11Q9Y2W2 641 aaKnown RBP7.63□□□□□ -1.19
CTNND1-216ENST00000527467 GADD45BO75293 160 aaPredicted RBP7.63□□□□□ -1.19
CTNND1-216ENST00000527467 TNFRSF21O75509 655 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 FAM200BP0CF97 657 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 GSPT1P15170 499 aaKnown RBP7.63□□□□□ -1.19
CTNND1-216ENST00000527467 S100A1P23297 94 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 DYNLT1P63172 113 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 ATP8B2P98198 1209 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 PURAQ00577 322 aaKnown RBP7.63□□□□□ -1.19
CTNND1-216ENST00000527467 SP3Q02447 781 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 CAV1Q03135 178 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 PPIDQ08752 370 aaKnown RBP7.63□□□□□ -1.19
CTNND1-216ENST00000527467 TRIP13Q15645 432 aaPredicted RBP7.63□□□□□ -1.19
CTNND1-216ENST00000527467 LRRC36Q1X8D7 754 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 AAK1Q2M2I8 961 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 PLEKHA7Q6IQ23 1121 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 CCDC81Q6ZN84 652 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 LARP4BQ92615 738 aaKnown RBP7.63□□□□□ -1.19
CTNND1-216ENST00000527467 CEP44Q9C0F1 390 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 CUEDC2Q9H467 287 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 NOL6Q9H6R4 1146 aaKnown RBP7.63□□□□□ -1.19
CTNND1-216ENST00000527467 ERAP1Q9NZ08 941 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 DAPK2Q9UIK4 370 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 IQSEC3Q9UPP2 1182 aaPredicted RBP7.63□□□□□ -1.19
CTNND1-216ENST00000527467 CCDC162PA2VCL2 907 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 SEMA3DO95025 777 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 LCA5LO95447 670 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 ABCB1P08183 1280 aaPredicted RBP7.63□□□□□ -1.19
CTNND1-216ENST00000527467 MAGOHP61326 146 aaKnown RBP7.63□□□□□ -1.19
CTNND1-216ENST00000527467 RPS6P62753 249 aaKnown RBP7.63□□□□□ -1.19
CTNND1-216ENST00000527467 ADAM9Q13443 819 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 TAB1Q15750 504 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 SHROOM1Q2M3G4 852 aaPredicted RBP7.63□□□□□ -1.19
CTNND1-216ENST00000527467 ZCWPW2Q504Y3 356 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 KRT40Q6A162 431 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 THOC7Q6I9Y2 204 aaKnown RBP7.63□□□□□ -1.19
CTNND1-216ENST00000527467 FAM173BQ6P4H8 233 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 NEK10Q6ZWH5 1172 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 SFR1Q86XK3 245 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 KCTD6Q8NC69 237 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 FAM149B1Q96BN6 582 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 FRMD6Q96NE9 622 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 MNTQ99583 582 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 CALN1Q9BXU9 219 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 DISC1Q9NRI5 854 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 FKBP14Q9NWM8 211 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 COPG2Q9UBF2 871 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 SLC8A2Q9UPR5 921 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 MYO1GB0I1T2 1018 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 ZNF197O14709 1029 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 CYTH3O43739 400 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 YWHABP31946 246 aaKnown RBP7.63□□□□□ -1.19
CTNND1-216ENST00000527467 RGS2P41220 211 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 GYS2P54840 703 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 KLHL17Q6TDP4 642 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 PASD1Q8IV76 773 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 CCDC60Q8IWA6 550 aaPredicted RBP7.63□□□□□ -1.19
CTNND1-216ENST00000527467 KRT78Q8N1N4 520 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 MAGEB6Q8N7X4 407 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 NLGN2Q8NFZ4 835 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 ANKRD49Q8WVL7 239 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 WRNIP1Q96S55 665 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 NUDT12Q9BQG2 462 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 FANCLQ9NW38 375 aa7.63□□□□□ -1.19
CTNND1-216ENST00000527467 CLRN2A0PK11 232 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 AP3B1O00203 1094 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 PIK3R2O00459 728 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 PGM3O95394 542 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 ALBP02768 609 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 FLT3P36888 993 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 MCCD1P59942 119 aaPredicted RBP7.62□□□□□ -1.19
CTNND1-216ENST00000527467 ARL13BQ3SXY8 428 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 RUNDC3AQ59EK9 446 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 E4F1Q66K89 784 aaPredicted RBP7.62□□□□□ -1.19
CTNND1-216ENST00000527467 SDE2Q6IQ49 451 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 NECAB2Q7Z6G3 386 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 GLMNQ92990 594 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 OTUD5Q96G74 571 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 UBXN6Q9BZV1 441 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 SERHL2Q9H4I8 314 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 CAAP1Q9H8G2 361 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 SERHLQ9NQF3 203 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 IARS2Q9NSE4 1012 aaKnown RBP7.62□□□□□ -1.19
CTNND1-216ENST00000527467 UBA2Q9UBT2 640 aaPredicted RBP7.62□□□□□ -1.19
CTNND1-216ENST00000527467 DIS3Q9Y2L1 958 aaKnown RBP7.62□□□□□ -1.19
CTNND1-216ENST00000527467 BRAFP15056 766 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 ARF4P18085 180 aaPredicted RBP7.62□□□□□ -1.19
CTNND1-216ENST00000527467 CHMLP26374 656 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 PIK3R1P27986 724 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 GRSF1Q12849 480 aaKnown RBP eCLIP7.62□□□□□ -1.19
CTNND1-216ENST00000527467 TRADDQ15628 312 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 C2CD6Q53TS8 623 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 TRIQKQ629K1 86 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 NAIF1Q69YI7 327 aaPredicted RBP7.62□□□□□ -1.19
CTNND1-216ENST00000527467 DNAJC24Q6P3W2 148 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 C16orf89Q6UX73 402 aa7.62□□□□□ -1.19
CTNND1-216ENST00000527467 TPH2Q8IWU9 490 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms