RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 TGFB1I1O43294 461 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 CSDE1O75534 798 aaKnown RBP13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 ADCY5O95622 1261 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 NR3C1P04150 777 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 ITGB1P05556 798 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 TPM3P06753 285 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 TPM2P07951 284 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 ATP1A3P13637 1013 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 NR2F2P24468 414 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 PTENP60484 403 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 MYBPC2Q14324 1141 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 KCNJ12Q14500 433 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 MAPK6Q16659 721 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 FILIP1LQ4L180 1135 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 TIGD5Q53EQ6 642 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 TCP11X2Q5H9J9 407 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 CDCA2Q69YH5 1023 aaPredicted RBP13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 ZNF410Q86VK4 478 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 KLHL23Q8NBE8 558 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 BICD1Q96G01 975 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 SCLT1Q96NL6 688 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 FDXACB1Q9BRP7 624 aaPredicted RBP13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 NFKBIZQ9BYH8 718 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 NSUN3Q9H649 340 aaKnown RBP13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 AGPAT3Q9NRZ7 376 aa13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 RNF216Q9NWF9 866 aaPredicted RBP13.83□□□□□ -0.2
SSSCA1-203ENST00000526877 TBKBP1A7MCY6 615 aa13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 FGFR1P11362 822 aa13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 IBSPP21815 317 aaPredicted RBP13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 MTIF2P46199 727 aaKnown RBP13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 LIG4P49917 911 aa13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 UBASH3AP57075 661 aa13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 HSP90AA2PQ14568 343 aaPredicted RBP13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 LEXMQ3ZCV2 418 aa13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 CCDC40Q4G0X9 1142 aa13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 ARMCX5Q6P1M9 558 aa13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 LRRC55Q6ZSA7 311 aa13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 ZNF598Q86UK7 904 aaKnown RBP13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 ECHDC2Q86YB7 292 aa13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 C12orf56Q8IXR9 622 aa13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 ZC3H3Q8IXZ2 948 aaKnown RBP13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 NLRP7Q8WX94 980 aa13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 CNOT6LQ96LI5 555 aaKnown RBP13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 CASD1Q96PB1 797 aa13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 MRPL4Q9BYD3 311 aaKnown RBP13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 GCOM2Q9BZD3 368 aaPredicted RBP13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 CWH43Q9H720 699 aa13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 HCSTQ9UBK5 93 aa13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 LIMA1Q9UHB6 759 aaKnown RBP13.82□□□□□ -0.2
SSSCA1-203ENST00000526877 A0A0U1RQF3 1178 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 INO80B-WBP1J3KQ70 363 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 HNRNPDLO14979 420 aaKnown RBP13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 AP5Z1O43299 807 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 PRKCBP05771 671 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 EPB41P11171 864 aaKnown RBP13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 ZSCAN20P17040 1043 aaPredicted RBP13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 ATF7P17544 494 aaPredicted RBP13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 LTBRP36941 435 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 ZNF75DP51815 510 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 CTC1Q2NKJ3 1217 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 CEP135Q66GS9 1140 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 SLFN12LQ6IEE8 588 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 ZPBP2Q6X784 338 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 TAS1R3Q7RTX0 852 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 SRGAP1Q7Z6B7 1085 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 IFNLR1Q8IU57 520 aaPredicted RBP13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 IRF2BP1Q8IU81 584 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 SLC9A9Q8IVB4 645 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 TMEM174Q8WUU8 243 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 PABPC5Q96DU9 382 aaKnown RBP13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 TRAIPQ9BWF2 469 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 INO80BQ9C086 356 aaPredicted RBP13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 CCDC113Q9H0I3 377 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 IFT122Q9HBG6 1241 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 CHST12Q9NRB3 414 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 PRMT7Q9NVM4 692 aaPredicted RBP13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 IFNKQ9P0W0 207 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 FRMD4BQ9Y2L6 1034 aa13.81□□□□□ -0.2
SSSCA1-203ENST00000526877 KIAA0391O15091 583 aaKnown RBP13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 SLC16A3O15427 465 aaKnown RBP13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 EXOC3O60645 756 aa13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 PIGRP01833 764 aa13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 GARTP22102 1010 aa13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 KCNA5P22460 613 aa13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 IRS1P35568 1242 aa13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 PSMC2P35998 433 aaKnown RBP13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 MATR3P43243 847 aaKnown RBP eCLIP13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 CYP2J2P51589 502 aa13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 HYAL1Q12794 435 aa13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 KRT31Q15323 416 aa13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 TMEM132AQ24JP5 1023 aa13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 XXYLT1Q8NBI6 393 aa13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 POMGNT1Q8WZA1 660 aa13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 EEF2KMTQ96G04 330 aa13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 MKNK1Q9BUB5 465 aa13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 TMEM117Q9H0C3 514 aa13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 IKZF4Q9H2S9 585 aa13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 FZD8Q9H461 694 aa13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 METTL14Q9HCE5 456 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms