RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 COPS5Q92905 334 aa3.55□□□□□ -1.84
TRAPPC4-207ENST00000526141 PHKBQ93100 1093 aa3.55□□□□□ -1.84
TRAPPC4-207ENST00000526141 FERMT2Q96AC1 680 aa3.55□□□□□ -1.84
TRAPPC4-207ENST00000526141 TMEM41AQ96HV5 264 aa3.55□□□□□ -1.84
TRAPPC4-207ENST00000526141 PAWRQ96IZ0 340 aaKnown RBP3.55□□□□□ -1.84
TRAPPC4-207ENST00000526141 ZSCAN31Q96LW9 406 aaPredicted RBP3.55□□□□□ -1.84
TRAPPC4-207ENST00000526141 YTHDC1Q96MU7 727 aaKnown RBP3.55□□□□□ -1.84
TRAPPC4-207ENST00000526141 CLIC6Q96NY7 704 aa3.55□□□□□ -1.84
TRAPPC4-207ENST00000526141 WRNIP1Q96S55 665 aa3.55□□□□□ -1.84
TRAPPC4-207ENST00000526141 TTLL2Q9BWV7 592 aa3.55□□□□□ -1.84
TRAPPC4-207ENST00000526141 LSM14BQ9BX40 385 aaKnown RBP3.55□□□□□ -1.84
TRAPPC4-207ENST00000526141 TMEM120AQ9BXJ8 343 aa3.55□□□□□ -1.84
TRAPPC4-207ENST00000526141 WDR26Q9H7D7 661 aa3.55□□□□□ -1.84
TRAPPC4-207ENST00000526141 HELLSQ9NRZ9 838 aa3.55□□□□□ -1.84
TRAPPC4-207ENST00000526141 TMX2Q9Y320 296 aa3.55□□□□□ -1.84
TRAPPC4-207ENST00000526141 SLC12A8A0AV02 714 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 ANKRD18BA2A2Z9 1011 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 B4E171 279 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 FAM47E-STBD1D6RA91 191 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 NPIPB8E9PQR5 432 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 EIF3FO00303 357 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 KPNA5O15131 536 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 SGSM2O43147 1006 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 FRS3O43559 492 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 NCK2O43639 380 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 B4GALT4O60513 344 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 MSCO60682 206 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 VAMP4O75379 141 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 THBDP07204 575 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 PDCP20941 246 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 KRT9P35527 623 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 TSPAN7P41732 249 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 RAD52P43351 418 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 STT3AP46977 705 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 SLC6A11P48066 632 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 FXR1P51114 621 aaKnown RBP eCLIP3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 ARL4CP56559 192 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 LACTBP83111 547 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 SRSF2Q01130 221 aaKnown RBP3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 FOXE3Q13461 319 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 PRKD1Q15139 912 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 CNN3Q15417 329 aaKnown RBP3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 TAF11Q15544 211 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 FSCN1Q16658 493 aaKnown RBP3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 UAP1L1Q3KQV9 507 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 FAM209BQ5JX69 171 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 C16orf59Q7L2K0 433 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 MILR1Q7Z6M3 343 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 ZSCAN30Q86W11 494 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 CACNA2D3Q8IZS8 1091 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 THEMISQ8N1K5 641 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 KLHL36Q8N4N3 616 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 KIAA1958Q8N8K9 716 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 ZNF527Q8NB42 609 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 PCYOX1LQ8NBM8 494 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 SLC30A5Q8TAD4 765 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 Q8TCH9 128 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 FRS2Q8WU20 508 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 TGFBRAP1Q8WUH2 860 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 BRI3BPQ8WY22 251 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 MBD6Q96DN6 1003 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 CHFRQ96EP1 664 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 WWC2-AS2Q96NR7 200 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 SYT3Q9BQG1 590 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 MCMBPQ9BTE3 642 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 LRFN3Q9BTN0 628 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 AP1M1Q9BXS5 423 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 BARX1Q9HBU1 254 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 TOMM22Q9NS69 142 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 CWC25Q9NXE8 425 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 MARCH2Q9P0N8 246 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 FTSJ1Q9UET6 329 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 SERPINB13Q9UIV8 391 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 FBXO10Q9UK96 956 aa3.54□□□□□ -1.84
TRAPPC4-207ENST00000526141 FFAR2O15552 330 aa3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 IRAK2O43187 625 aa3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 PLOD3O60568 738 aa3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 SKAP2O75563 359 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 FGF18O76093 207 aa3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 GFPT2O94808 682 aa3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 PTMAP06454 111 aaKnown RBP3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 MTHFD2P13995 350 aa3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 SLC9A1P19634 815 aa3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 CD40P25942 277 aa3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 MAPK10P53779 464 aa3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 SLC5A3P53794 718 aa3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 SLC16A1P53985 500 aa3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 CLNS1AP54105 237 aaKnown RBP3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 ZBED6P86452 979 aa3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 ALDH6A1Q02252 535 aaKnown RBP3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 DPTQ07507 201 aa3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 ZNF543Q08ER8 600 aa3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 ADAM9Q13443 819 aa3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 PRKG1Q13976 671 aa3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 STARD3Q14849 445 aa3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 CRY1Q16526 586 aa3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 CCDC92Q53HC0 331 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 TOR2AQ5JU69 321 aa3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 MIIPQ5JXC2 388 aa3.53□□□□□ -1.84
TRAPPC4-207ENST00000526141 IQCEQ6IPM2 695 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms