RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 LIN9Q5TKA1 542 aa11.8□□□□□ -0.52
VPS26B-203ENST00000525918 NSUN7Q8NE18 718 aaKnown RBP11.8□□□□□ -0.52
VPS26B-203ENST00000525918 KCNG4Q8TDN1 519 aa11.8□□□□□ -0.52
VPS26B-203ENST00000525918 SHDQ96IW2 340 aa11.8□□□□□ -0.52
VPS26B-203ENST00000525918 POLR3CQ9BUI4 534 aaPredicted RBP11.8□□□□□ -0.52
VPS26B-203ENST00000525918 PDZD7Q9H5P4 517 aa11.8□□□□□ -0.52
VPS26B-203ENST00000525918 DLGAP2Q9P1A6 1054 aa11.8□□□□□ -0.52
VPS26B-203ENST00000525918 CDH7Q9ULB5 785 aa11.8□□□□□ -0.52
VPS26B-203ENST00000525918 NOTCH4Q99466 2003 aa11.8□□□□□ -0.52
VPS26B-203ENST00000525918 TTLL13PA6NNM8 815 aa11.79□□□□□ -0.52
VPS26B-203ENST00000525918 ACKR2O00590 384 aa11.79□□□□□ -0.52
VPS26B-203ENST00000525918 XYLBO75191 536 aa11.79□□□□□ -0.52
VPS26B-203ENST00000525918 MED24O75448 989 aa11.79□□□□□ -0.52
VPS26B-203ENST00000525918 RECQL4O94761 1208 aa11.79□□□□□ -0.52
VPS26B-203ENST00000525918 C8AP07357 584 aa11.79□□□□□ -0.52
VPS26B-203ENST00000525918 DCNP07585 359 aaKnown RBP11.79□□□□□ -0.52
VPS26B-203ENST00000525918 RPA1P27694 616 aa11.79□□□□□ -0.52
VPS26B-203ENST00000525918 MCM7P33993 719 aa11.79□□□□□ -0.52
VPS26B-203ENST00000525918 UVSSAQ2YD98 709 aa11.79□□□□□ -0.52
VPS26B-203ENST00000525918 ZC3H14Q6PJT7 736 aaKnown RBP11.79□□□□□ -0.52
VPS26B-203ENST00000525918 PADI6Q6TGC4 694 aa11.79□□□□□ -0.52
VPS26B-203ENST00000525918 PARM1Q6UWI2 310 aa11.79□□□□□ -0.52
VPS26B-203ENST00000525918 MTSS1LQ765P7 747 aa11.79□□□□□ -0.52
VPS26B-203ENST00000525918 NOSTRINQ8IVI9 506 aa11.79□□□□□ -0.52
VPS26B-203ENST00000525918 C1orf210Q8IVY1 113 aa11.79□□□□□ -0.52
VPS26B-203ENST00000525918 ERMNQ8TAM6 284 aa11.79□□□□□ -0.52
VPS26B-203ENST00000525918 FGF13Q92913 245 aa11.79□□□□□ -0.52
VPS26B-203ENST00000525918 FGF14Q92915 247 aa11.79□□□□□ -0.52
VPS26B-203ENST00000525918 RPP25Q9BUL9 199 aaKnown RBP11.79□□□□□ -0.52
VPS26B-203ENST00000525918 TMEM60Q9H2L4 133 aa11.79□□□□□ -0.52
VPS26B-203ENST00000525918 POLIQ9UNA4 740 aa11.79□□□□□ -0.52
VPS26B-203ENST00000525918 PATJQ8NI35 1801 aa11.79□□□□□ -0.52
VPS26B-203ENST00000525918 CACNA1IQ9P0X4 2223 aa11.78□□□□□ -0.52
VPS26B-203ENST00000525918 ZNF292O60281 2723 aa11.78□□□□□ -0.52
VPS26B-203ENST00000525918 LARGE1O95461 756 aa11.78□□□□□ -0.52
VPS26B-203ENST00000525918 PRKCBP05771 671 aa11.78□□□□□ -0.52
VPS26B-203ENST00000525918 CYP11B2P19099 503 aa11.78□□□□□ -0.52
VPS26B-203ENST00000525918 OR1D2P34982 312 aa11.78□□□□□ -0.52
VPS26B-203ENST00000525918 NAMPTP43490 491 aa11.78□□□□□ -0.52
VPS26B-203ENST00000525918 RBM25P49756 843 aaKnown RBP11.78□□□□□ -0.52
VPS26B-203ENST00000525918 GPC5P78333 572 aa11.78□□□□□ -0.52
VPS26B-203ENST00000525918 NTHL1P78549 312 aa11.78□□□□□ -0.52
VPS26B-203ENST00000525918 RAB33AQ14088 237 aa11.78□□□□□ -0.52
VPS26B-203ENST00000525918 PPP2R5AQ15172 486 aa11.78□□□□□ -0.52
VPS26B-203ENST00000525918 SAFBQ15424 915 aaKnown RBP eCLIP11.78□□□□□ -0.52
VPS26B-203ENST00000525918 AXDND1Q5T1B0 1012 aaPredicted RBP11.78□□□□□ -0.52
VPS26B-203ENST00000525918 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.78□□□□□ -0.52
VPS26B-203ENST00000525918 RTL10Q7L3V2 364 aa11.78□□□□□ -0.52
VPS26B-203ENST00000525918 ST13P5Q8NFI4 369 aaPredicted RBP11.78□□□□□ -0.52
VPS26B-203ENST00000525918 PJA1Q8NG27 643 aa11.78□□□□□ -0.52
VPS26B-203ENST00000525918 DEPTORQ8TB45 409 aa11.78□□□□□ -0.52
VPS26B-203ENST00000525918 BSNDQ8WZ55 320 aa11.78□□□□□ -0.52
VPS26B-203ENST00000525918 CCDC113Q9H0I3 377 aa11.78□□□□□ -0.52
VPS26B-203ENST00000525918 CXCL16Q9H2A7 254 aa11.78□□□□□ -0.52
VPS26B-203ENST00000525918 R4GN57 208 aa11.78□□□□□ -0.52
VPS26B-203ENST00000525918 WDR87Q6ZQQ6 2873 aa11.77□□□□□ -0.52
VPS26B-203ENST00000525918 KANSL1LA0AUZ9 987 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 ARHGEF35A5YM69 484 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 TMEM189-UBE2V1I3L0A0 370 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 HAX1O00165 279 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 CCL16O15467 120 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 ADAM12O43184 909 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 JAK2O60674 1132 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 POU2F2P09086 479 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 SP9P0CG40 484 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 GLULP15104 373 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 MUTP22033 750 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 FGFR3P22607 806 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 EFNA5P52803 228 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 FOSBP53539 338 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 PRKCQQ04759 706 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 ORC2Q13416 577 aaPredicted RBP11.77□□□□□ -0.53
VPS26B-203ENST00000525918 SNW1Q13573 536 aaKnown RBP11.77□□□□□ -0.53
VPS26B-203ENST00000525918 DCAF4L1Q3SXM0 396 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 APBB1IPQ7Z5R6 666 aaPredicted RBP11.77□□□□□ -0.53
VPS26B-203ENST00000525918 SLC7A14Q8TBB6 771 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 IFT74Q96LB3 600 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 FOXQ1Q9C009 403 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 MTRRQ9UBK8 725 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 USP20Q9Y2K6 914 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 GDAQ9Y2T3 454 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 CITO14578 2027 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 GVINP1Q7Z2Y8 2422 aa11.77□□□□□ -0.53
VPS26B-203ENST00000525918 TRAPPC3O43617 180 aa11.76□□□□□ -0.53
VPS26B-203ENST00000525918 B3GAT3O94766 335 aa11.76□□□□□ -0.53
VPS26B-203ENST00000525918 EDN1P05305 212 aa11.76□□□□□ -0.53
VPS26B-203ENST00000525918 LIG1P18858 919 aa11.76□□□□□ -0.53
VPS26B-203ENST00000525918 CLCNKBP51801 687 aa11.76□□□□□ -0.53
VPS26B-203ENST00000525918 NEK4P51957 841 aa11.76□□□□□ -0.53
VPS26B-203ENST00000525918 PFKPQ01813 784 aa11.76□□□□□ -0.53
VPS26B-203ENST00000525918 PABPC1LQ4VXU2 614 aaKnown RBP11.76□□□□□ -0.53
VPS26B-203ENST00000525918 SLC44A4Q53GD3 710 aa11.76□□□□□ -0.53
VPS26B-203ENST00000525918 EEF1DP3Q658K8 133 aa11.76□□□□□ -0.53
VPS26B-203ENST00000525918 HAUS3Q68CZ6 603 aa11.76□□□□□ -0.53
VPS26B-203ENST00000525918 ITFG1Q8TB96 612 aa11.76□□□□□ -0.53
VPS26B-203ENST00000525918 BORCS6Q96GS4 357 aa11.76□□□□□ -0.53
VPS26B-203ENST00000525918 UROC1Q96N76 676 aa11.76□□□□□ -0.53
VPS26B-203ENST00000525918 PPP1R10Q96QC0 940 aaKnown RBP11.76□□□□□ -0.53
VPS26B-203ENST00000525918 DDX23Q9BUQ8 820 aaKnown RBP11.76□□□□□ -0.53
VPS26B-203ENST00000525918 OSBPL6Q9BZF3 934 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms