RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 STAG3L1P0CL83 205 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 CXCL8P10145 99 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 CCNE1P24864 410 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 PBX3P40426 434 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 GCGRP47871 477 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 DLG4P78352 724 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 CDC42EP1Q00587 391 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 SOX4Q06945 474 aaPredicted RBP7.08□□□□□ -1.28
CD44-214ENST00000525211 STRN3Q13033 797 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 IKBKEQ14164 716 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 NOLC1Q14978 699 aaKnown RBP eCLIP7.08□□□□□ -1.28
CD44-214ENST00000525211 NCAPHQ15003 741 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 NAB2Q15742 525 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 ANO6Q4KMQ2 910 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 PAN2Q504Q3 1202 aaKnown RBP7.08□□□□□ -1.28
CD44-214ENST00000525211 HSP90AA4PQ58FG1 418 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 GLRA4Q5JXX5 417 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 ARMCX5Q6P1M9 558 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 NOTUMQ6P988 496 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 SLC27A1Q6PCB7 646 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 ALKAL1Q6UXT8 129 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 ZPBP2Q6X784 338 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 ZNF280BQ86YH2 543 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 ZC3H3Q8IXZ2 948 aaKnown RBP7.08□□□□□ -1.28
CD44-214ENST00000525211 EFCAB13Q8IY85 973 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 SYCP3Q8IZU3 236 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 USP38Q8NB14 1042 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 HELQQ8TDG4 1101 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 NOC3LQ8WTT2 800 aaKnown RBP7.08□□□□□ -1.28
CD44-214ENST00000525211 POMGNT1Q8WZA1 660 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 ZNF516Q92618 1163 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 P2RX5Q93086 422 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 C18orf25Q96B23 403 aaPredicted RBP7.08□□□□□ -1.28
CD44-214ENST00000525211 HVCN1Q96D96 273 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 BORCS6Q96GS4 357 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 PRIMPOLQ96LW4 560 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 GAD1Q99259 594 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 POP1Q99575 1024 aaKnown RBP7.08□□□□□ -1.28
CD44-214ENST00000525211 LBHD1Q9BQE6 289 aaPredicted RBP7.08□□□□□ -1.28
CD44-214ENST00000525211 PAAF1Q9BRP4 392 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 FAM213AQ9BRX8 229 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 UBE2OQ9C0C9 1292 aaKnown RBP7.08□□□□□ -1.28
CD44-214ENST00000525211 GBP3Q9H0R5 595 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 RC3H2Q9HBD1 1191 aaKnown RBP7.08□□□□□ -1.28
CD44-214ENST00000525211 GOLGA2P5Q9HBQ8 144 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 TYW1Q9NV66 732 aaKnown RBP7.08□□□□□ -1.28
CD44-214ENST00000525211 HSPBP1Q9NZL4 362 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 CPSF3Q9UKF6 684 aaKnown RBP7.08□□□□□ -1.28
CD44-214ENST00000525211 AGO2Q9UKV8 859 aaKnown RBP7.08□□□□□ -1.28
CD44-214ENST00000525211 TRAF3IP3Q9Y228 551 aa7.08□□□□□ -1.28
CD44-214ENST00000525211 ABHD14A-ACY1A0A1B0GW23 586 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 OGTO15294 1046 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 CLDN3O15551 220 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 ZNF623O75123 536 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 DGKIO75912 1065 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 DDHD2O94830 711 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 NR3C1P04150 777 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 MCF2P10911 925 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 ZSCAN20P17040 1043 aaPredicted RBP7.07□□□□□ -1.28
CD44-214ENST00000525211 AXLP30530 894 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 MLH1P40692 756 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 GRM5P41594 1212 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 SCNN1GP51170 649 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 IQCB1Q15051 598 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 PTPN21Q16825 1174 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 CD300LGQ6UXG3 332 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 SLC24A5Q71RS6 500 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 LAPTM4BQ86VI4 370 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 DHX40Q8IX18 779 aaKnown RBP7.07□□□□□ -1.28
CD44-214ENST00000525211 C12orf56Q8IXR9 622 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 RPUSD2Q8IZ73 545 aaKnown RBP7.07□□□□□ -1.28
CD44-214ENST00000525211 TRIML1Q8N9V2 468 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 OR5B17Q8NGF7 314 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 CXorf38Q8TB03 319 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 BCL7CQ8WUZ0 217 aaPredicted RBP7.07□□□□□ -1.28
CD44-214ENST00000525211 TOP1MTQ969P6 601 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 ZNF689Q96CS4 500 aaPredicted RBP7.07□□□□□ -1.28
CD44-214ENST00000525211 SNX27Q96L92 541 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 FBXL18Q96ME1 805 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 TCHPQ9BT92 498 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 MSTO1Q9BUK6 570 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 TRAIPQ9BWF2 469 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 CWH43Q9H720 699 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 PDE11AQ9HCR9 933 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 CHST12Q9NRB3 414 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 SAMSN1Q9NSI8 373 aaKnown RBP7.07□□□□□ -1.28
CD44-214ENST00000525211 RMND1Q9NWS8 449 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 DNAJB4Q9UDY4 337 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 PARP2Q9UGN5 583 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 INPP5FQ9Y2H2 1132 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 TRIP11Q15643 1979 aa7.07□□□□□ -1.28
CD44-214ENST00000525211 UBE4BO95155 1302 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 TTC26A0AVF1 554 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 ARL5CA6NH57 179 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 EPOPA6NHQ4 379 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 TBKBP1A7MCY6 615 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 TK2O00142 265 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 PDXKO00764 312 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 AP5Z1O43299 807 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 EXTL3O43909 919 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms