RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 U2AF1L4Q8WU68 220 aaKnown RBP10.75□□□□□ -0.69
VPS13B-212ENST00000524330 CTNNBL1Q8WYA6 563 aaPredicted RBP10.75□□□□□ -0.69
VPS13B-212ENST00000524330 UBXN4Q92575 508 aa10.75□□□□□ -0.69
VPS13B-212ENST00000524330 ZBTB45Q96K62 511 aaPredicted RBP10.75□□□□□ -0.69
VPS13B-212ENST00000524330 WDR24Q96S15 920 aa10.75□□□□□ -0.69
VPS13B-212ENST00000524330 AGPAT1Q99943 283 aa10.75□□□□□ -0.69
VPS13B-212ENST00000524330 MTG1Q9BT17 334 aaPredicted RBP10.75□□□□□ -0.69
VPS13B-212ENST00000524330 CCDC94Q9BW85 323 aaPredicted RBP10.75□□□□□ -0.69
VPS13B-212ENST00000524330 ASB7Q9H672 318 aa10.75□□□□□ -0.69
VPS13B-212ENST00000524330 NAGPAQ9UK23 515 aa10.75□□□□□ -0.69
VPS13B-212ENST00000524330 SAR1BQ9Y6B6 198 aa10.75□□□□□ -0.69
VPS13B-212ENST00000524330 CNTNAP2Q9UHC6 1331 aa10.75□□□□□ -0.69
VPS13B-212ENST00000524330 GOLGB1Q14789 3259 aaKnown RBP10.75□□□□□ -0.69
VPS13B-212ENST00000524330 A0A087WZ62 844 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 A0A087X0T9 212 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 EFCAB8A8MWE9 144 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 FOXN3O00409 490 aaPredicted RBP10.74□□□□□ -0.69
VPS13B-212ENST00000524330 CTIFO43310 598 aaKnown RBP10.74□□□□□ -0.69
VPS13B-212ENST00000524330 LRRN2O75325 713 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 C4BPAP04003 597 aaKnown RBP10.74□□□□□ -0.69
VPS13B-212ENST00000524330 TUBBP07437 444 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 FAM228BP0C875 321 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 GZMAP12544 262 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 KRT5P13647 590 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 PRLRP16471 622 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 TCP1P17987 556 aaKnown RBP10.74□□□□□ -0.69
VPS13B-212ENST00000524330 PROZP22891 400 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 NOP2P46087 812 aaKnown RBP10.74□□□□□ -0.69
VPS13B-212ENST00000524330 YARSP54577 528 aaKnown RBP10.74□□□□□ -0.69
VPS13B-212ENST00000524330 CHMP4BP1P59074 171 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 CYP4F22Q6NT55 531 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 TAF2Q6P1X5 1199 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 GJB7Q6PEY0 223 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 TRIM72Q6ZMU5 477 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 C15orf39Q6ZRI6 1047 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 THNSL1Q8IYQ7 743 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 FAM71AQ8IYT1 594 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 TTC39CQ8N584 583 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 PLEKHO2Q8TD55 490 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 TAS1R2Q8TE23 839 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 SHC3Q92529 594 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 GOLGA1Q92805 767 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 FAM212AQ96EL1 285 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 TRIM11Q96F44 468 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 CAPNS2Q96L46 248 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 TSPAN18Q96SJ8 248 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 FDXACB1Q9BRP7 624 aaPredicted RBP10.74□□□□□ -0.69
VPS13B-212ENST00000524330 PDCL3Q9H2J4 239 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 PDE11AQ9HCR9 933 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 CREBZFQ9NS37 354 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 RNF14Q9UBS8 474 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 CPSF3Q9UKF6 684 aaKnown RBP10.74□□□□□ -0.69
VPS13B-212ENST00000524330 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.74□□□□□ -0.69
VPS13B-212ENST00000524330 MRFAP1Q9Y605 127 aa10.74□□□□□ -0.69
VPS13B-212ENST00000524330 MBLAC1A4D2B0 266 aaPredicted RBP10.73□□□□□ -0.69
VPS13B-212ENST00000524330 CTAGE15A4D2H0 777 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 SEPT4O43236 478 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 XPOTO43592 962 aaKnown RBP10.73□□□□□ -0.69
VPS13B-212ENST00000524330 B4GALT4O60513 344 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 ECM2O94769 699 aaPredicted RBP10.73□□□□□ -0.69
VPS13B-212ENST00000524330 VTNP04004 478 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 C6orf222P0C671 652 aaPredicted RBP10.73□□□□□ -0.69
VPS13B-212ENST00000524330 TMEM253P0C7T8 217 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 CTAGE8P0CG41 777 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 PAFAH1B1P43034 410 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 GJA9P57773 515 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 APBA1Q02410 837 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 NCOA4Q13772 614 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 CCL14Q16627 93 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 TMEM63BQ5T3F8 832 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 NOTUMQ6P988 496 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 CRELD2Q6UXH1 353 aaPredicted RBP10.73□□□□□ -0.69
VPS13B-212ENST00000524330 CATSPER4Q7RTX7 472 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 CTAGE6Q86UF2 777 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 ARHGEF19Q8IW93 802 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 CTAGE4Q8IX94 777 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 RHOT2Q8IXI1 618 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 HACE1Q8IYU2 909 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 KIAA0319LQ8IZA0 1049 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 CAGE1Q8TC20 777 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 ACAP3Q96P50 834 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 POP1Q99575 1024 aaKnown RBP10.73□□□□□ -0.69
VPS13B-212ENST00000524330 CFHR5Q9BXR6 569 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 CDT1Q9H211 546 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 FAM124BQ9H5Z6 455 aaPredicted RBP10.73□□□□□ -0.69
VPS13B-212ENST00000524330 PTPRHQ9HD43 1115 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 SETD4Q9NVD3 440 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 ARGLU1Q9NWB6 273 aaPredicted RBP10.73□□□□□ -0.69
VPS13B-212ENST00000524330 FLRT1Q9NZU1 646 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 HYOU1Q9Y4L1 999 aa10.73□□□□□ -0.69
VPS13B-212ENST00000524330 ZSWIM8A7E2V4 1837 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 MGAMO43451 1857 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 ANKRD62A6NC57 917 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 HAS3O00219 553 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 ZNF263O14978 683 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 RTN2O75298 545 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 ATICP31939 592 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 MAP2K2P36507 400 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 FLT3LGP49771 235 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 PRMT2P55345 433 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms