RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 PSMD5Q16401 504 aa13.03□□□□□ -0.32
SPARC-206ENST00000524277 RTP2Q5QGT7 225 aa13.03□□□□□ -0.32
SPARC-206ENST00000524277 ATF7IP2Q5U623 682 aa13.03□□□□□ -0.32
SPARC-206ENST00000524277 KRT79Q5XKE5 535 aa13.03□□□□□ -0.32
SPARC-206ENST00000524277 SPATA31D4Q6ZUB0 917 aa13.03□□□□□ -0.32
SPARC-206ENST00000524277 SIX5Q8N196 739 aa13.03□□□□□ -0.32
SPARC-206ENST00000524277 IGSF22Q8N9C0 903 aa13.03□□□□□ -0.32
SPARC-206ENST00000524277 DDX27Q96GQ7 796 aaKnown RBP13.03□□□□□ -0.32
SPARC-206ENST00000524277 B3GALT6Q96L58 329 aa13.03□□□□□ -0.32
SPARC-206ENST00000524277 MYADMQ96S97 322 aa13.03□□□□□ -0.32
SPARC-206ENST00000524277 CLSTN3Q9BQT9 956 aa13.03□□□□□ -0.32
SPARC-206ENST00000524277 TIPINQ9BVW5 301 aa13.03□□□□□ -0.32
SPARC-206ENST00000524277 TOPORSQ9NS56 1045 aaPredicted RBP13.03□□□□□ -0.32
SPARC-206ENST00000524277 SLC38A7Q9NVC3 462 aa13.03□□□□□ -0.32
SPARC-206ENST00000524277 KIAA1024Q9UPX6 916 aa13.03□□□□□ -0.32
SPARC-206ENST00000524277 TNFSF13BQ9Y275 285 aa13.03□□□□□ -0.32
SPARC-206ENST00000524277 MTCL1Q9Y4B5 1905 aaKnown RBP13.03□□□□□ -0.32
SPARC-206ENST00000524277 ANHXE9PGG2 379 aa13.02□□□□□ -0.33
SPARC-206ENST00000524277 KIF4AO95239 1232 aa13.02□□□□□ -0.33
SPARC-206ENST00000524277 NPR3P17342 541 aa13.02□□□□□ -0.33
SPARC-206ENST00000524277 LIG1P18858 919 aa13.02□□□□□ -0.33
SPARC-206ENST00000524277 FGFR3P22607 806 aa13.02□□□□□ -0.33
SPARC-206ENST00000524277 FSHRP23945 695 aa13.02□□□□□ -0.33
SPARC-206ENST00000524277 RAB33AQ14088 237 aa13.02□□□□□ -0.33
SPARC-206ENST00000524277 PPM1LQ5SGD2 360 aa13.02□□□□□ -0.33
SPARC-206ENST00000524277 CWF19L1Q69YN2 538 aaKnown RBP13.02□□□□□ -0.33
SPARC-206ENST00000524277 PHLDB3Q6NSJ2 640 aa13.02□□□□□ -0.33
SPARC-206ENST00000524277 PRSS55Q6UWB4 352 aaPredicted RBP13.02□□□□□ -0.33
SPARC-206ENST00000524277 CEP57Q86XR8 500 aa13.02□□□□□ -0.33
SPARC-206ENST00000524277 CCDC105Q8IYK2 499 aa13.02□□□□□ -0.33
SPARC-206ENST00000524277 FEZF2Q8TBJ5 459 aa13.02□□□□□ -0.33
SPARC-206ENST00000524277 DRC1Q96MC2 740 aa13.02□□□□□ -0.33
SPARC-206ENST00000524277 PPP1R10Q96QC0 940 aaKnown RBP13.02□□□□□ -0.33
SPARC-206ENST00000524277 PAAF1Q9BRP4 392 aa13.02□□□□□ -0.33
SPARC-206ENST00000524277 CCDC94Q9BW85 323 aaPredicted RBP13.02□□□□□ -0.33
SPARC-206ENST00000524277 SLC2A4RGQ9NR83 387 aa13.02□□□□□ -0.33
SPARC-206ENST00000524277 DDX19AQ9NUU7 478 aaKnown RBP13.02□□□□□ -0.33
SPARC-206ENST00000524277 FAM86C1Q9NVL1 165 aa13.02□□□□□ -0.33
SPARC-206ENST00000524277 RIF1Q5UIP0 2472 aaKnown RBP13.01□□□□□ -0.33
SPARC-206ENST00000524277 USP34Q70CQ2 3546 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 TTLL13PA6NNM8 815 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 STK25O00506 426 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 B3GAT3O94766 335 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 SEC24BO95487 1268 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 C8AP07357 584 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 RPL17P18621 184 aaKnown RBP13.01□□□□□ -0.33
SPARC-206ENST00000524277 RFX1P22670 979 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 GRM5P41594 1212 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 PTGDRQ13258 359 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 DMP1Q13316 513 aaPredicted RBP13.01□□□□□ -0.33
SPARC-206ENST00000524277 XKR4Q5GH76 650 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 NT5DC1Q5TFE4 455 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 EEF1DP3Q658K8 133 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 DTHD1Q6ZMT9 781 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 ANKS3Q6ZW76 656 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 MTSS1LQ765P7 747 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 GET4Q7L5D6 327 aaPredicted RBP13.01□□□□□ -0.33
SPARC-206ENST00000524277 GLYCTKQ8IVS8 523 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 SNX29Q8TEQ0 813 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 RABGGTAQ92696 567 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 SHDQ96IW2 340 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 ACO2Q99798 780 aaKnown RBP13.01□□□□□ -0.33
SPARC-206ENST00000524277 MRPL4Q9BYD3 311 aaKnown RBP13.01□□□□□ -0.33
SPARC-206ENST00000524277 SEMA4AQ9H3S1 761 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 KCNH3Q9ULD8 1083 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 GDAQ9Y2T3 454 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.01□□□□□ -0.33
SPARC-206ENST00000524277 BACE2Q9Y5Z0 518 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 C2orf16Q68DN1 1984 aa13.01□□□□□ -0.33
SPARC-206ENST00000524277 CCDC169A6NNP5 214 aa13□□□□□ -0.33
SPARC-206ENST00000524277 MCF2P10911 925 aa13□□□□□ -0.33
SPARC-206ENST00000524277 RPL9P32969 192 aaKnown RBP13□□□□□ -0.33
SPARC-206ENST00000524277 HTR4Q13639 388 aa13□□□□□ -0.33
SPARC-206ENST00000524277 ECM1Q16610 540 aa13□□□□□ -0.33
SPARC-206ENST00000524277 UPP1Q16831 310 aa13□□□□□ -0.33
SPARC-206ENST00000524277 RILPL1Q5EBL4 403 aa13□□□□□ -0.33
SPARC-206ENST00000524277 DTWD2Q8NBA8 298 aa13□□□□□ -0.33
SPARC-206ENST00000524277 HASPINQ8TF76 798 aa13□□□□□ -0.33
SPARC-206ENST00000524277 RSAD2Q8WXG1 361 aa13□□□□□ -0.33
SPARC-206ENST00000524277 NKD2Q969F2 451 aaPredicted RBP13□□□□□ -0.33
SPARC-206ENST00000524277 NTPCRQ9BSD7 190 aaKnown RBP13□□□□□ -0.33
SPARC-206ENST00000524277 PTPRHQ9HD43 1115 aa13□□□□□ -0.33
SPARC-206ENST00000524277 KMT5AQ9NQR1 393 aa13□□□□□ -0.33
SPARC-206ENST00000524277 KCND2Q9NZV8 630 aa13□□□□□ -0.33
SPARC-206ENST00000524277 ARHGAP28Q9P2N2 729 aa13□□□□□ -0.33
SPARC-206ENST00000524277 MTRRQ9UBK8 725 aa13□□□□□ -0.33
SPARC-206ENST00000524277 CDH7Q9ULB5 785 aa13□□□□□ -0.33
SPARC-206ENST00000524277 SMIM28A0A1B0GU29 152 aa12.99□□□□□ -0.33
SPARC-206ENST00000524277 PI15O43692 258 aa12.99□□□□□ -0.33
SPARC-206ENST00000524277 NARSO43776 548 aaKnown RBP12.99□□□□□ -0.33
SPARC-206ENST00000524277 CFHP08603 1231 aa12.99□□□□□ -0.33
SPARC-206ENST00000524277 MYBP10242 640 aa12.99□□□□□ -0.33
SPARC-206ENST00000524277 KCNE1P15382 129 aa12.99□□□□□ -0.33
SPARC-206ENST00000524277 SCP2P22307 547 aa12.99□□□□□ -0.33
SPARC-206ENST00000524277 OR1D2P34982 312 aa12.99□□□□□ -0.33
SPARC-206ENST00000524277 NPTX2P47972 431 aa12.99□□□□□ -0.33
SPARC-206ENST00000524277 TOB1P50616 345 aaPredicted RBP12.99□□□□□ -0.33
SPARC-206ENST00000524277 CLCNKBP51801 687 aa12.99□□□□□ -0.33
SPARC-206ENST00000524277 SMTNP53814 917 aa12.99□□□□□ -0.33
SPARC-206ENST00000524277 PEX3P56589 373 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms