RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 DDX53Q86TM3 631 aaKnown RBP13.07□□□□□ -0.32
CLN8-207ENST00000524258 TMEM130Q8N3G9 435 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 TMEM87AQ8NBN3 555 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 ZSWIM2Q8NEG5 633 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 ZNF507Q8TCN5 953 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 ACAP3Q96P50 834 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 TCHPQ9BT92 498 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 NSUN3Q9H649 340 aaKnown RBP13.07□□□□□ -0.32
CLN8-207ENST00000524258 ANKFY1Q9P2R3 1169 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 CPSF3Q9UKF6 684 aaKnown RBP13.07□□□□□ -0.32
CLN8-207ENST00000524258 PCDHB13Q9Y5F0 798 aa13.07□□□□□ -0.32
CLN8-207ENST00000524258 TGFB1I1O43294 461 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 GADD45BO75293 160 aaPredicted RBP13.06□□□□□ -0.32
CLN8-207ENST00000524258 GCNT3O95395 438 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 THP07101 528 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 CLTAP09496 248 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 GTF2F1P35269 517 aaKnown RBP eCLIP13.06□□□□□ -0.32
CLN8-207ENST00000524258 LTBRP36941 435 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 LIG4P49917 911 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 DPYDQ12882 1025 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 TUSC3Q13454 348 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 ALCAMQ13740 583 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 KCNC3Q14003 757 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 ENOX2Q16206 610 aaKnown RBP13.06□□□□□ -0.32
CLN8-207ENST00000524258 BMT2Q1RMZ1 405 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 TIGD5Q53EQ6 642 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 FAM26FQ5R3K3 315 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 CLEC17AQ6ZS10 378 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 TAS1R1Q7RTX1 841 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 APBB1IPQ7Z5R6 666 aaPredicted RBP13.06□□□□□ -0.32
CLN8-207ENST00000524258 CEP57L1Q8IYX8 460 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 MICALL1Q8N3F8 863 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 SCFD1Q8WVM8 642 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 PPM1EQ8WY54 764 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 RABGGTAQ92696 567 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 ACCSQ96QU6 501 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 CCDC94Q9BW85 323 aaPredicted RBP13.06□□□□□ -0.32
CLN8-207ENST00000524258 ZBP1Q9H171 429 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 TLR9Q9NR96 1032 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 FAN1Q9Y2M0 1017 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 TTC28Q96AY4 2481 aa13.06□□□□□ -0.32
CLN8-207ENST00000524258 CARNS1A5YM72 827 aa13.05□□□□□ -0.32
CLN8-207ENST00000524258 HIDE1A8MVS5 230 aa13.05□□□□□ -0.32
CLN8-207ENST00000524258 EIF3DO15371 548 aaKnown RBP eCLIP13.05□□□□□ -0.32
CLN8-207ENST00000524258 MYL1P05976 194 aa13.05□□□□□ -0.32
CLN8-207ENST00000524258 CXCL8P10145 99 aa13.05□□□□□ -0.32
CLN8-207ENST00000524258 HARSP12081 509 aaKnown RBP13.05□□□□□ -0.32
CLN8-207ENST00000524258 WNT7BP56706 349 aa13.05□□□□□ -0.32
CLN8-207ENST00000524258 STK4Q13043 487 aa13.05□□□□□ -0.32
CLN8-207ENST00000524258 KMT5BQ4FZB7 885 aa13.05□□□□□ -0.32
CLN8-207ENST00000524258 GLRA4Q5JXX5 417 aa13.05□□□□□ -0.32
CLN8-207ENST00000524258 MRPL43Q8N983 215 aaKnown RBP13.05□□□□□ -0.32
CLN8-207ENST00000524258 KIAA0895Q8NCT3 520 aa13.05□□□□□ -0.32
CLN8-207ENST00000524258 VN1R2Q8NFZ6 395 aa13.05□□□□□ -0.32
CLN8-207ENST00000524258 BICD1Q96G01 975 aa13.05□□□□□ -0.32
CLN8-207ENST00000524258 GPR62Q9BZJ7 368 aa13.05□□□□□ -0.32
CLN8-207ENST00000524258 PLEKHA5Q9HAU0 1116 aa13.05□□□□□ -0.32
CLN8-207ENST00000524258 CHST7Q9NS84 486 aa13.05□□□□□ -0.32
CLN8-207ENST00000524258 PRG3Q9Y2Y8 225 aaPredicted RBP13.05□□□□□ -0.32
CLN8-207ENST00000524258 IRAK3Q9Y616 596 aa13.05□□□□□ -0.32
CLN8-207ENST00000524258 VCANP13611 3396 aa13.05□□□□□ -0.32
CLN8-207ENST00000524258 TRIP11Q15643 1979 aa13.05□□□□□ -0.32
CLN8-207ENST00000524258 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.04□□□□□ -0.32
CLN8-207ENST00000524258 C2orf71A6NGG8 1288 aa13.04□□□□□ -0.32
CLN8-207ENST00000524258 LACTBL1A8MY62 500 aa13.04□□□□□ -0.32
CLN8-207ENST00000524258 GLP2RO95838 553 aa13.04□□□□□ -0.32
CLN8-207ENST00000524258 CTSAP10619 480 aa13.04□□□□□ -0.32
CLN8-207ENST00000524258 GARTP22102 1010 aa13.04□□□□□ -0.32
CLN8-207ENST00000524258 OR1G1P47890 313 aa13.04□□□□□ -0.32
CLN8-207ENST00000524258 POU5F1Q01860 360 aaKnown RBP13.04□□□□□ -0.32
CLN8-207ENST00000524258 KRT17Q04695 432 aa13.04□□□□□ -0.32
CLN8-207ENST00000524258 ADAM15Q13444 863 aa13.04□□□□□ -0.32
CLN8-207ENST00000524258 UPP1Q16831 310 aa13.04□□□□□ -0.32
CLN8-207ENST00000524258 SLFN12LQ6IEE8 588 aa13.04□□□□□ -0.32
CLN8-207ENST00000524258 PDE12Q6L8Q7 609 aaKnown RBP13.04□□□□□ -0.32
CLN8-207ENST00000524258 VPS52Q8N1B4 723 aa13.04□□□□□ -0.32
CLN8-207ENST00000524258 C3orf58Q8NDZ4 430 aa13.04□□□□□ -0.32
CLN8-207ENST00000524258 SPATA20Q8TB22 786 aa13.04□□□□□ -0.32
CLN8-207ENST00000524258 C18orf25Q96B23 403 aaPredicted RBP13.04□□□□□ -0.32
CLN8-207ENST00000524258 TMEM169Q96HH4 297 aa13.04□□□□□ -0.32
CLN8-207ENST00000524258 FAM193BQ96PV7 902 aaPredicted RBP13.04□□□□□ -0.32
CLN8-207ENST00000524258 RPS6KC1Q96S38 1066 aa13.04□□□□□ -0.32
CLN8-207ENST00000524258 CBWD1Q9BRT8 395 aa13.04□□□□□ -0.32
CLN8-207ENST00000524258 MSTO1Q9BUK6 570 aa13.04□□□□□ -0.32
CLN8-207ENST00000524258 GOLGA2P5Q9HBQ8 144 aa13.04□□□□□ -0.32
CLN8-207ENST00000524258 SLC39A2Q9NP94 309 aa13.04□□□□□ -0.32
CLN8-207ENST00000524258 NGRNQ9NPE2 291 aaKnown RBP13.04□□□□□ -0.32
CLN8-207ENST00000524258 TOPORSQ9NS56 1045 aaPredicted RBP13.04□□□□□ -0.32
CLN8-207ENST00000524258 PUF60Q9UHX1 559 aaKnown RBP13.04□□□□□ -0.32
CLN8-207ENST00000524258 AGO2Q9UKV8 859 aaKnown RBP13.04□□□□□ -0.32
CLN8-207ENST00000524258 CASTOR2A6NHX0 329 aa13.03□□□□□ -0.32
CLN8-207ENST00000524258 TMEM189-UBE2V1I3L0A0 370 aa13.03□□□□□ -0.32
CLN8-207ENST00000524258 LINC01565O15544 149 aa13.03□□□□□ -0.32
CLN8-207ENST00000524258 NR1I2O75469 434 aa13.03□□□□□ -0.32
CLN8-207ENST00000524258 RHOBTB3O94955 611 aa13.03□□□□□ -0.32
CLN8-207ENST00000524258 KIF4AO95239 1232 aa13.03□□□□□ -0.32
CLN8-207ENST00000524258 SOD2P04179 222 aa13.03□□□□□ -0.32
CLN8-207ENST00000524258 RPN1P04843 607 aaKnown RBP13.03□□□□□ -0.32
CLN8-207ENST00000524258 ACOT2P49753 483 aa13.03□□□□□ -0.32
CLN8-207ENST00000524258 YARSP54577 528 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms