RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 EPS8L3Q8TE67 593 aaKnown RBP11.86□□□□□ -0.51
HDAC9-228ENST00000524023 ATXN2LQ8WWM7 1075 aaKnown RBP11.86□□□□□ -0.51
HDAC9-228ENST00000524023 BSNDQ8WZ55 320 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 ELMO3Q96BJ8 720 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 ZNF317Q96PQ6 595 aaPredicted RBP11.86□□□□□ -0.51
HDAC9-228ENST00000524023 RMDN3Q96TC7 470 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 SELENOSQ9BQE4 189 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 PXMP2Q9NR77 195 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 GOLGA6L7A0A1B0GV03 622 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 DLATP10515 647 aaKnown RBP11.86□□□□□ -0.51
HDAC9-228ENST00000524023 SPRED3Q2MJR0 410 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 FER1L6Q2WGJ9 1857 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 ANKRD20A8PQ5CZ79 823 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 TNFAIP8L3Q5GJ75 292 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 RTKN2Q8IZC4 609 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 SPIRE2Q8WWL2 714 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 POMGNT1Q8WZA1 660 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 SLCO2A1Q92959 643 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 NTPCRQ9BSD7 190 aaKnown RBP11.86□□□□□ -0.51
HDAC9-228ENST00000524023 PLVAPQ9BX97 442 aa11.86□□□□□ -0.51
HDAC9-228ENST00000524023 ZNF277Q9NRM2 450 aaPredicted RBP11.86□□□□□ -0.51
HDAC9-228ENST00000524023 TESPA1A2RU30 521 aaPredicted RBP11.85□□□□□ -0.51
HDAC9-228ENST00000524023 DNM1LO00429 736 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 RASGRF2O14827 1237 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 GTF2A1P52655 376 aaPredicted RBP11.85□□□□□ -0.51
HDAC9-228ENST00000524023 SOX10P56693 466 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 CALCOCO2Q13137 446 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 PPP1R7Q15435 360 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 NBPF9Q3BBW0 867 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 ZNF568Q3ZCX4 644 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 SGO2Q562F6 1265 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 USP37Q86T82 979 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 C1orf54Q8WWF1 131 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 ZBED3Q96IU2 234 aaPredicted RBP11.85□□□□□ -0.51
HDAC9-228ENST00000524023 CEP89Q96ST8 783 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 MOV10L1Q9BXT6 1211 aaKnown RBP11.85□□□□□ -0.51
HDAC9-228ENST00000524023 KIAA1683Q9H0B3 1180 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 ARID2Q68CP9 1835 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 TP73O15350 636 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 RASSF9O75901 435 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 CALCAP01258 141 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 UNGP13051 313 aaPredicted RBP11.85□□□□□ -0.51
HDAC9-228ENST00000524023 KRT5P13647 590 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 MAPK4P31152 587 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 SLCO1A2P46721 670 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 GCNT1Q02742 428 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 AUHQ13825 339 aaKnown RBP11.85□□□□□ -0.51
HDAC9-228ENST00000524023 LLGL1Q15334 1064 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 LACTB2Q53H82 288 aaPredicted RBP11.85□□□□□ -0.51
HDAC9-228ENST00000524023 ENOSF1Q7L5Y1 443 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 CCDC25Q86WR0 208 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 AGBL3Q8NEM8 1001 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 RDM1Q8NG50 284 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 CCDC114Q96M63 670 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 PI4K2AQ9BTU6 479 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 STMN4Q9H169 189 aaPredicted RBP11.85□□□□□ -0.51
HDAC9-228ENST00000524023 C17orf75Q9HAS0 396 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 WHRNQ9P202 907 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 ANAPC7Q9UJX3 599 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 SCAF8Q9UPN6 1271 aaKnown RBP11.85□□□□□ -0.51
HDAC9-228ENST00000524023 PCDHA10Q9Y5I2 948 aa11.85□□□□□ -0.51
HDAC9-228ENST00000524023 KIAA1217Q5T5P2 1943 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 WNT10BO00744 389 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 KRT17Q04695 432 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 ARHGEF16Q5VV41 709 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 MFSD5Q6N075 450 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 TRMT10CQ7L0Y3 403 aaKnown RBP11.84□□□□□ -0.51
HDAC9-228ENST00000524023 OTUD6AQ7L8S5 288 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 MCOLN2Q8IZK6 566 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 GPD1LQ8N335 351 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 TTLL6Q8N841 843 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 CCT6BQ92526 530 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 P3H4Q92791 437 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 CEP170P1Q96L14 293 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 ROPN1BQ9BZX4 212 aaPredicted RBP11.84□□□□□ -0.51
HDAC9-228ENST00000524023 CCDC134Q9H6E4 229 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 ROPN1Q9HAT0 212 aaPredicted RBP11.84□□□□□ -0.51
HDAC9-228ENST00000524023 AVENQ9NQS1 362 aaPredicted RBP11.84□□□□□ -0.51
HDAC9-228ENST00000524023 AAASQ9NRG9 546 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 INTS9Q9NV88 658 aaKnown RBP11.84□□□□□ -0.51
HDAC9-228ENST00000524023 ADGRA3Q8IWK6 1321 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 HNRNPDLO14979 420 aaKnown RBP11.84□□□□□ -0.51
HDAC9-228ENST00000524023 ASAP2O43150 1006 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 ZNF862O60290 1169 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 ZC3H11AO75152 810 aaKnown RBP eCLIP11.84□□□□□ -0.51
HDAC9-228ENST00000524023 STBD1O95210 358 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 GARTP22102 1010 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 SCP2P22307 547 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 MNAT1P51948 309 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 ENPEPQ07075 957 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 SNX1Q13596 522 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 SWT1Q5T5J6 900 aaKnown RBP11.84□□□□□ -0.51
HDAC9-228ENST00000524023 RHBDF2Q6PJF5 856 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 NLRX1Q86UT6 975 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 CCDC197Q8NCU1 140 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 SENP7Q9BQF6 1050 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 JPH2Q9BR39 696 aaPredicted RBP11.84□□□□□ -0.51
HDAC9-228ENST00000524023 TRIM7Q9C029 511 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 CDC42EP4Q9H3Q1 356 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms