RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 HNRNPA1P09651 372 aaKnown RBP eCLIP28.65■■■□□ 2.18
PVT1-219ENST00000523427 STARD6P59095 220 aa28.65■■■□□ 2.18
PVT1-219ENST00000523427 UBXN2BQ14CS0 331 aa28.65■■■□□ 2.18
PVT1-219ENST00000523427 PDZD7Q9H5P4 517 aa28.65■■■□□ 2.18
PVT1-219ENST00000523427 SPATA6Q9NWH7 488 aaPredicted RBP28.65■■■□□ 2.18
PVT1-219ENST00000523427 HCFC1R1Q9NWW0 138 aa28.65■■■□□ 2.18
PVT1-219ENST00000523427 GDAQ9Y2T3 454 aa28.65■■■□□ 2.18
PVT1-219ENST00000523427 N4BP3O15049 544 aa28.64■■■□□ 2.18
PVT1-219ENST00000523427 XYLBO75191 536 aa28.64■■■□□ 2.18
PVT1-219ENST00000523427 CD72P21854 359 aa28.64■■■□□ 2.18
PVT1-219ENST00000523427 PRPF4BQ13523 1007 aaKnown RBP28.64■■■□□ 2.18
PVT1-219ENST00000523427 AXDND1Q5T1B0 1012 aaPredicted RBP28.64■■■□□ 2.18
PVT1-219ENST00000523427 PPP4R3CPQ6ZMV5 832 aa28.64■■■□□ 2.18
PVT1-219ENST00000523427 DGLUCYQ7Z3D6 616 aa28.64■■■□□ 2.18
PVT1-219ENST00000523427 ING5Q8WYH8 240 aa28.64■■■□□ 2.18
PVT1-219ENST00000523427 CACNA1AO00555 2505 aa28.63■■■□□ 2.17
PVT1-219ENST00000523427 OR1D2P34982 312 aa28.63■■■□□ 2.17
PVT1-219ENST00000523427 SLC44A4Q53GD3 710 aa28.63■■■□□ 2.17
PVT1-219ENST00000523427 MTSS1LQ765P7 747 aa28.63■■■□□ 2.17
PVT1-219ENST00000523427 BSNDQ8WZ55 320 aa28.63■■■□□ 2.17
PVT1-219ENST00000523427 RUBCNQ92622 972 aa28.63■■■□□ 2.17
PVT1-219ENST00000523427 PRIMPOLQ96LW4 560 aa28.63■■■□□ 2.17
PVT1-219ENST00000523427 FZD8Q9H461 694 aa28.63■■■□□ 2.17
PVT1-219ENST00000523427 POLD4Q9HCU8 107 aa28.63■■■□□ 2.17
PVT1-219ENST00000523427 MTF2Q9Y483 593 aaPredicted RBP28.63■■■□□ 2.17
PVT1-219ENST00000523427 COL4A3Q01955 1670 aa28.63■■■□□ 2.17
PVT1-219ENST00000523427 ZMYM2Q9UBW7 1377 aa28.62■■■□□ 2.17
PVT1-219ENST00000523427 KANSL1LA0AUZ9 987 aa28.62■■■□□ 2.17
PVT1-219ENST00000523427 MED19A0JLT2 244 aaPredicted RBP28.62■■■□□ 2.17
PVT1-219ENST00000523427 PRKCBP05771 671 aa28.62■■■□□ 2.17
PVT1-219ENST00000523427 IGFBP6P24592 240 aaPredicted RBP28.62■■■□□ 2.17
PVT1-219ENST00000523427 MLF2Q15773 248 aaPredicted RBP28.62■■■□□ 2.17
PVT1-219ENST00000523427 GLRA4Q5JXX5 417 aa28.62■■■□□ 2.17
PVT1-219ENST00000523427 DIS3L2Q8IYB7 885 aaKnown RBP28.62■■■□□ 2.17
PVT1-219ENST00000523427 MCPH1Q8NEM0 835 aa28.62■■■□□ 2.17
PVT1-219ENST00000523427 MTMR9Q96QG7 549 aa28.62■■■□□ 2.17
PVT1-219ENST00000523427 ADPGKQ9BRR6 497 aa28.62■■■□□ 2.17
PVT1-219ENST00000523427 BCO2Q9BYV7 579 aa28.62■■■□□ 2.17
PVT1-219ENST00000523427 TMEM60Q9H2L4 133 aa28.62■■■□□ 2.17
PVT1-219ENST00000523427 FAM170BA6NMN3 283 aa28.61■■■□□ 2.17
PVT1-219ENST00000523427 MED24O75448 989 aa28.61■■■□□ 2.17
PVT1-219ENST00000523427 SPATA31C1P0DKV0 1188 aa28.61■■■□□ 2.17
PVT1-219ENST00000523427 XRCC6P12956 609 aaKnown RBP eCLIP28.61■■■□□ 2.172e-7■■■■□ 23.7
PVT1-219ENST00000523427 ELAVL2Q12926 359 aaKnown RBP28.61■■■□□ 2.17
PVT1-219ENST00000523427 MAPK6Q16659 721 aa28.61■■■□□ 2.17
PVT1-219ENST00000523427 EEF1DP3Q658K8 133 aa28.61■■■□□ 2.17
PVT1-219ENST00000523427 CDCA2Q69YH5 1023 aaPredicted RBP28.61■■■□□ 2.17
PVT1-219ENST00000523427 CATSPER3Q86XQ3 398 aa28.61■■■□□ 2.17
PVT1-219ENST00000523427 MAML2Q8IZL2 1156 aaPredicted RBP28.61■■■□□ 2.17
PVT1-219ENST00000523427 DEPTORQ8TB45 409 aa28.61■■■□□ 2.17
PVT1-219ENST00000523427 OTOGLQ3ZCN5 2332 aa28.6■■■□□ 2.17
PVT1-219ENST00000523427 LAMTOR5O43504 91 aa28.6■■■□□ 2.17
PVT1-219ENST00000523427 KINO60870 393 aaKnown RBP28.6■■■□□ 2.17
PVT1-219ENST00000523427 MCM7P33993 719 aa28.6■■■□□ 2.17
PVT1-219ENST00000523427 PABPC1LQ4VXU2 614 aaKnown RBP28.6■■■□□ 2.17
PVT1-219ENST00000523427 C2orf40Q9H1Z8 148 aa28.6■■■□□ 2.17
PVT1-219ENST00000523427 DNMT3BQ9UBC3 853 aaKnown RBP28.6■■■□□ 2.17
PVT1-219ENST00000523427 DMXL1Q9Y485 3027 aa28.6■■■□□ 2.17
PVT1-219ENST00000523427 GPR179Q6PRD1 2367 aa28.6■■■□□ 2.17
PVT1-219ENST00000523427 MYH15Q9Y2K3 1946 aa28.59■■■□□ 2.17
PVT1-219ENST00000523427 I3L4J1 428 aa28.59■■■□□ 2.17
PVT1-219ENST00000523427 B3GAT3O94766 335 aa28.59■■■□□ 2.17
PVT1-219ENST00000523427 LARGE1O95461 756 aa28.59■■■□□ 2.17
PVT1-219ENST00000523427 EDN1P05305 212 aa28.59■■■□□ 2.17
PVT1-219ENST00000523427 CSTF1Q05048 431 aaKnown RBP28.59■■■□□ 2.17
PVT1-219ENST00000523427 RAB33AQ14088 237 aa28.59■■■□□ 2.17
PVT1-219ENST00000523427 TRIM29Q14134 588 aa28.59■■■□□ 2.17
PVT1-219ENST00000523427 NAB2Q15742 525 aa28.59■■■□□ 2.17
PVT1-219ENST00000523427 FAM187BQ17R55 369 aa28.59■■■□□ 2.17
PVT1-219ENST00000523427 PDXDC1Q6P996 788 aa28.59■■■□□ 2.17
PVT1-219ENST00000523427 PADI6Q6TGC4 694 aa28.59■■■□□ 2.17
PVT1-219ENST00000523427 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.59■■■□□ 2.17
PVT1-219ENST00000523427 MCRS1Q96EZ8 462 aa28.59■■■□□ 2.17
PVT1-219ENST00000523427 KIFC3Q9BVG8 833 aa28.59■■■□□ 2.17
PVT1-219ENST00000523427 MRPS23Q9Y3D9 190 aaKnown RBP28.59■■■□□ 2.17
PVT1-219ENST00000523427 CDY1Q9Y6F8 540 aa28.59■■■□□ 2.17
PVT1-219ENST00000523427 CEP250Q9BV73 2442 aa28.58■■■□□ 2.17
PVT1-219ENST00000523427 JAK2O60674 1132 aa28.58■■■□□ 2.17
PVT1-219ENST00000523427 HOXA9P31269 272 aa28.58■■■□□ 2.17
PVT1-219ENST00000523427 RSPO2Q6UXX9 243 aaPredicted RBP28.58■■■□□ 2.17
PVT1-219ENST00000523427 NPAS3Q8IXF0 933 aa28.58■■■□□ 2.17
PVT1-219ENST00000523427 NACC1Q96RE7 527 aa28.58■■■□□ 2.17
PVT1-219ENST00000523427 TUFT1Q9NNX1 390 aa28.58■■■□□ 2.17
PVT1-219ENST00000523427 FRYLO94915 3013 aa28.57■■■□□ 2.16
PVT1-219ENST00000523427 ARHGEF35A5YM69 484 aa28.57■■■□□ 2.16
PVT1-219ENST00000523427 ACKR2O00590 384 aa28.57■■■□□ 2.16
PVT1-219ENST00000523427 PRKCQQ04759 706 aa28.57■■■□□ 2.16
PVT1-219ENST00000523427 ANKRD1Q15327 319 aa28.57■■■□□ 2.16
PVT1-219ENST00000523427 ME3Q16798 604 aa28.57■■■□□ 2.16
PVT1-219ENST00000523427 FGFR3P22607 806 aa28.56■■■□□ 2.16
PVT1-219ENST00000523427 TKTP29401 623 aaKnown RBP28.56■■■□□ 2.16
PVT1-219ENST00000523427 CLCNKBP51801 687 aa28.56■■■□□ 2.16
PVT1-219ENST00000523427 PFKPQ01813 784 aa28.56■■■□□ 2.16
PVT1-219ENST00000523427 GUCY1B3Q02153 619 aa28.56■■■□□ 2.16
PVT1-219ENST00000523427 PUM1Q14671 1186 aaKnown RBP eCLIP28.56■■■□□ 2.16
PVT1-219ENST00000523427 SUMF1Q8NBK3 374 aa28.56■■■□□ 2.16
PVT1-219ENST00000523427 NSUN7Q8NE18 718 aaKnown RBP28.56■■■□□ 2.16
PVT1-219ENST00000523427 GOLGA2P5Q9HBQ8 144 aa28.56■■■□□ 2.16
PVT1-219ENST00000523427 LTB4R2Q9NPC1 389 aa28.56■■■□□ 2.16
PVT1-219ENST00000523427 NCDNQ9UBB6 729 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms