RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 MTMR12Q9C0I1 747 aa16.31■□□□□ 0.2
CSGALNACT1-211ENST00000522854 RNF208Q9H0X6 261 aa16.31■□□□□ 0.2
CSGALNACT1-211ENST00000522854 ARHGAP20Q9P2F6 1191 aa16.31■□□□□ 0.2
CSGALNACT1-211ENST00000522854 DNAJC12Q9UKB3 198 aa16.31■□□□□ 0.2
CSGALNACT1-211ENST00000522854 TFR2Q9UP52 801 aa16.31■□□□□ 0.2
CSGALNACT1-211ENST00000522854 PLAGL2Q9UPG8 496 aa16.31■□□□□ 0.2
CSGALNACT1-211ENST00000522854 PIN4Q9Y237 131 aaKnown RBP16.31■□□□□ 0.2
CSGALNACT1-211ENST00000522854 VNN1O95497 513 aa16.3■□□□□ 0.2
CSGALNACT1-211ENST00000522854 C4BPAP04003 597 aaKnown RBP16.3■□□□□ 0.2
CSGALNACT1-211ENST00000522854 CRYBB1P53674 252 aaPredicted RBP16.3■□□□□ 0.2
CSGALNACT1-211ENST00000522854 CLDN10P78369 228 aa16.3■□□□□ 0.2
CSGALNACT1-211ENST00000522854 BIRC3Q13489 604 aa16.3■□□□□ 0.2
CSGALNACT1-211ENST00000522854 MEA1Q16626 185 aa16.3■□□□□ 0.2
CSGALNACT1-211ENST00000522854 CYP26C1Q6V0L0 522 aa16.3■□□□□ 0.2
CSGALNACT1-211ENST00000522854 C15orf39Q6ZRI6 1047 aa16.3■□□□□ 0.2
CSGALNACT1-211ENST00000522854 FAM228AQ86W67 206 aa16.3■□□□□ 0.2
CSGALNACT1-211ENST00000522854 TATDN2Q93075 761 aa16.3■□□□□ 0.2
CSGALNACT1-211ENST00000522854 CGRRF1Q99675 332 aa16.3■□□□□ 0.2
CSGALNACT1-211ENST00000522854 GPR88Q9GZN0 384 aa16.3■□□□□ 0.2
CSGALNACT1-211ENST00000522854 STARD7Q9NQZ5 370 aa16.3■□□□□ 0.2
CSGALNACT1-211ENST00000522854 APEX2Q9UBZ4 518 aa16.3■□□□□ 0.2
CSGALNACT1-211ENST00000522854 CITO14578 2027 aa16.3■□□□□ 0.2
CSGALNACT1-211ENST00000522854 ZNF500O60304 480 aaPredicted RBP16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 B4GALT4O60513 344 aa16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 CCL5P13501 91 aa16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 SESTD1Q86VW0 696 aa16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 CCAR2Q8N163 923 aaKnown RBP16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 FBXL13Q8NEE6 735 aa16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 SPAG5Q96R06 1193 aa16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 APOL6Q9BWW8 343 aa16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 UBE2TQ9NPD8 197 aaPredicted RBP16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 PAK6Q9NQU5 681 aaPredicted RBP16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 SPTLC3Q9NUV7 552 aa16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 RAB20Q9NX57 234 aa16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 NOD1Q9Y239 953 aa16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 LAMA2P24043 3122 aaKnown RBP16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 MOXD2PA6NHM9 499 aa16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 LACTBL1A8MY62 500 aa16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 NRDCO43847 1150 aa16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 CST3P01034 146 aaPredicted RBP16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 NFICP08651 508 aa16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 MCF2P10911 925 aa16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 TFAMQ00059 246 aaKnown RBP16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 NFX1Q12986 1120 aaKnown RBP16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 TSR1Q2NL82 804 aaKnown RBP16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 ZACNQ401N2 412 aa16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 SFMBT2Q5VUG0 894 aa16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 HGSNATQ68CP4 663 aa16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 NME8Q8N427 588 aa16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 ARID3AQ99856 593 aa16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 NXF3Q9H4D5 531 aaKnown RBP16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 NHEJ1Q9H9Q4 299 aaPredicted RBP16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 SNTG2Q9NY99 539 aa16.29■□□□□ 0.2
CSGALNACT1-211ENST00000522854 N4BP1O75113 896 aaKnown RBP16.28■□□□□ 0.2
CSGALNACT1-211ENST00000522854 ABL1P00519 1130 aa16.28■□□□□ 0.2
CSGALNACT1-211ENST00000522854 JAM2P57087 298 aa16.28■□□□□ 0.2
CSGALNACT1-211ENST00000522854 CDC42EP1Q00587 391 aa16.28■□□□□ 0.2
CSGALNACT1-211ENST00000522854 CETN1Q12798 172 aa16.28■□□□□ 0.2
CSGALNACT1-211ENST00000522854 DRAP1Q14919 205 aaPredicted RBP16.28■□□□□ 0.2
CSGALNACT1-211ENST00000522854 SLC10A6Q3KNW5 377 aa16.28■□□□□ 0.2
CSGALNACT1-211ENST00000522854 USP37Q86T82 979 aa16.28■□□□□ 0.2
CSGALNACT1-211ENST00000522854 TMTC1Q8IUR5 882 aa16.28■□□□□ 0.2
CSGALNACT1-211ENST00000522854 PPM1KQ8N3J5 372 aa16.28■□□□□ 0.2
CSGALNACT1-211ENST00000522854 SENP6Q9GZR1 1112 aaPredicted RBP16.28■□□□□ 0.2
CSGALNACT1-211ENST00000522854 AGO3Q9H9G7 860 aaKnown RBP16.28■□□□□ 0.2
CSGALNACT1-211ENST00000522854 RPF1Q9H9Y2 349 aaKnown RBP16.28■□□□□ 0.2
CSGALNACT1-211ENST00000522854 COQ4Q9Y3A0 265 aa16.28■□□□□ 0.2
CSGALNACT1-211ENST00000522854 UMODL1Q5DID0 1318 aa16.28■□□□□ 0.2
CSGALNACT1-211ENST00000522854 GFPT2O94808 682 aa16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 CLSTN1O94985 981 aa16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 HLA-DRAP01903 254 aa16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 AKAP5P24588 427 aa16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 EIF4A3P38919 411 aaKnown RBP16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 PIK3CAP42336 1068 aa16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 GUCY2FP51841 1108 aa16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 CYP27A1Q02318 531 aa16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 MGAT3Q09327 533 aa16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 JADE1Q6IE81 842 aa16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 NOTUMQ6P988 496 aa16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 SLC27A1Q6PCB7 646 aa16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 PPP1R13BQ96KQ4 1090 aa16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 C16orf45Q96MC5 204 aaPredicted RBP16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 KREMEN1Q96MU8 473 aa16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 ADPGKQ9BRR6 497 aa16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 RNF39Q9H2S5 420 aa16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 ACP6Q9NPH0 428 aa16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 ZNHIT6Q9NWK9 470 aaKnown RBP16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 PPP2R2CQ9Y2T4 447 aa16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 REXO2Q9Y3B8 237 aaKnown RBP16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 TRPV2Q9Y5S1 764 aa16.27■□□□□ 0.2
CSGALNACT1-211ENST00000522854 KBTBD13C9JR72 458 aa16.27■□□□□ 0.19
CSGALNACT1-211ENST00000522854 F8VZ95 297 aa16.27■□□□□ 0.19
CSGALNACT1-211ENST00000522854 M0QZ92 97 aa16.27■□□□□ 0.19
CSGALNACT1-211ENST00000522854 P4HA2O15460 535 aa16.27■□□□□ 0.19
CSGALNACT1-211ENST00000522854 CABYRO75952 493 aa16.27■□□□□ 0.19
CSGALNACT1-211ENST00000522854 GHRP10912 638 aa16.27■□□□□ 0.19
CSGALNACT1-211ENST00000522854 IBSPP21815 317 aaPredicted RBP16.27■□□□□ 0.19
CSGALNACT1-211ENST00000522854 HNRNPH3P31942 346 aaKnown RBP16.27■□□□□ 0.19
CSGALNACT1-211ENST00000522854 GTF2H1P32780 548 aa16.27■□□□□ 0.19
CSGALNACT1-211ENST00000522854 LBX1P52954 281 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms