RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 ICAM1P05362 532 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 SULT1E1P49888 294 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 TRIM59Q8IWR1 403 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 PGBD3Q8N328 593 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 MAML1Q92585 1016 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 SLC7A5P2Q9GIP4 190 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 CYP26A1O43174 497 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 RTN2O75298 545 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 PNPLA4P41247 253 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 NOP14P78316 857 aaKnown RBP17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 THEMIS2Q5TEJ8 643 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 TTC17Q96AE7 1141 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 SEPT5Q99719 369 aaPredicted RBP17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 KCNH7Q9NS40 1196 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 TTC7AQ9ULT0 858 aaPredicted RBP17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 PACSIN2Q9UNF0 486 aaPredicted RBP17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 SH3BP1Q9Y3L3 701 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 QRICH2Q9H0J4 1663 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 SRGAP2O75044 1071 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 ESRRAP11474 423 aaPredicted RBP17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 ACADSBP45954 432 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 ANO4Q32M45 955 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 RASIP1Q5U651 963 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 SZRD1Q7Z422 152 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 TMEM169Q96HH4 297 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 NT5C1AQ9BXI3 368 aa17.18■□□□□ 0.34
PCDHA3-201ENST00000522353 NCOA3Q9Y6Q9 1424 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 TTC26A0AVF1 554 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 UBA6A0AVT1 1052 aaPredicted RBP17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 ACTR2P61160 394 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 PHEXP78562 749 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 SLITRK1Q96PX8 696 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 AGLP35573 1532 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 ZNF609O15014 1411 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 SPECC1L-ADORA2AF8WAN1 911 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 PI4K2BG5E9Z4 385 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 MAPK13O15264 365 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 PDGFRAP16234 1089 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 DDX5P17844 614 aaKnown RBP17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 RPA1P27694 616 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 GPS1Q13098 491 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 GTF2H3Q13889 308 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 PDXDC1Q6P996 788 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 SAMD3Q8N6K7 520 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 ZDHHC15Q96MV8 337 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 APEX2Q9UBZ4 518 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 PXDNLA1KZ92 1463 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 MYO1DO94832 1006 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 ALDH1A3P47895 512 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 EDRF1Q3B7T1 1238 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 MGAT5BQ3V5L5 792 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 ACAD11Q709F0 780 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 PPM1NQ8N819 430 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 C17orf75Q9HAS0 396 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 ALDH7A1P49419 539 aaKnown RBP17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 POU5F1BQ06416 359 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 ANKRD40Q6AI12 368 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 PCSK9Q8NBP7 692 aaKnown RBP17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 STK33Q9BYT3 514 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 TRIM15Q9C019 465 aa17.17■□□□□ 0.34
PCDHA3-201ENST00000522353 GRID2IPA4D2P6 1211 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 RASA4BC9J798 803 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 RASA4O43374 803 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 CCDC15Q0P6D6 951 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 INTS5Q6P9B9 1019 aaKnown RBP17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 BCORL1Q5H9F3 1711 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 FAM187AA6NFU0 413 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 CFLARO15519 480 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 PSMD3O43242 534 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 DNAJC8O75937 253 aaPredicted RBP17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 MAPRE1Q15691 268 aaKnown RBP17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 TBC1D19Q8N5T2 526 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 ATP11CQ8NB49 1132 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 ZKSCAN4Q969J2 545 aaPredicted RBP17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 COLEC11Q9BWP8 271 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 TRIM55Q9BYV6 548 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 CAMSAP1Q5T5Y3 1602 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 CLTCQ00610 1675 aaKnown RBP17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 HOXA2O43364 376 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 BACE1P56817 501 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 LAMB3Q13751 1172 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 FSCBQ5H9T9 825 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 PLA2G4FQ68DD2 849 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 SDE2Q6IQ49 451 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 EPB41L4AQ9HCS5 686 aaPredicted RBP17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 GTSE1Q9NYZ3 720 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 UVRAGQ9P2Y5 699 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 PLAAQ9Y263 795 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 GOLGA8MH3BSY2 632 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 KRT14P02533 472 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 ESRRGP62508 458 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 TAF11Q15544 211 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 ARHGAP15Q53QZ3 475 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 NUGGCQ68CJ6 796 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 RAPGEF5Q92565 580 aa17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 DACT3Q96B18 629 aaPredicted RBP17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 PRMT6Q96LA8 375 aaPredicted RBP17.16■□□□□ 0.34
PCDHA3-201ENST00000522353 A0A087WUV0 522 aaPredicted RBP17.15■□□□□ 0.34
PCDHA3-201ENST00000522353 C3orf70A6NLC5 250 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms