RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 FOXD2O60548 495 aaPredicted RBP9.9□□□□□ -0.82
MRPS28-207ENST00000521434 TADA2AO75478 443 aa9.9□□□□□ -0.82
MRPS28-207ENST00000521434 ECI2O75521 394 aa9.9□□□□□ -0.82
MRPS28-207ENST00000521434 POU2F2P09086 479 aa9.9□□□□□ -0.82
MRPS28-207ENST00000521434 ADD1P35611 737 aaKnown RBP9.9□□□□□ -0.82
MRPS28-207ENST00000521434 PSMC5P62195 406 aa9.9□□□□□ -0.82
MRPS28-207ENST00000521434 SHC2P98077 582 aa9.9□□□□□ -0.82
MRPS28-207ENST00000521434 EXOSC10Q01780 885 aaKnown RBP9.9□□□□□ -0.82
MRPS28-207ENST00000521434 NCBP1Q09161 790 aaKnown RBP9.9□□□□□ -0.82
MRPS28-207ENST00000521434 COL9A2Q14055 689 aaPredicted RBP9.9□□□□□ -0.82
MRPS28-207ENST00000521434 PCBP1Q15365 356 aaKnown RBP eCLIP9.9□□□□□ -0.82
MRPS28-207ENST00000521434 Q4G0T1 1027 aa9.9□□□□□ -0.82
MRPS28-207ENST00000521434 PABPC1LQ4VXU2 614 aaKnown RBP9.9□□□□□ -0.82
MRPS28-207ENST00000521434 RTP2Q5QGT7 225 aa9.9□□□□□ -0.82
MRPS28-207ENST00000521434 PRR23BQ6ZRT6 265 aa9.9□□□□□ -0.82
MRPS28-207ENST00000521434 DHX32Q7L7V1 743 aaKnown RBP9.9□□□□□ -0.82
MRPS28-207ENST00000521434 HACE1Q8IYU2 909 aa9.9□□□□□ -0.82
MRPS28-207ENST00000521434 RNF149Q8NC42 400 aa9.9□□□□□ -0.82
MRPS28-207ENST00000521434 GSTCDQ8NEC7 633 aa9.9□□□□□ -0.82
MRPS28-207ENST00000521434 TMEM143Q96AN5 459 aa9.9□□□□□ -0.82
MRPS28-207ENST00000521434 TCEANC2Q96MN5 208 aa9.9□□□□□ -0.82
MRPS28-207ENST00000521434 CLSTN3Q9BQT9 956 aa9.9□□□□□ -0.82
MRPS28-207ENST00000521434 CSRNP2Q9H175 543 aa9.9□□□□□ -0.82
MRPS28-207ENST00000521434 DHX33Q9H6R0 707 aaKnown RBP9.9□□□□□ -0.82
MRPS28-207ENST00000521434 PPME1Q9Y570 386 aa9.9□□□□□ -0.82
MRPS28-207ENST00000521434 TRIP11Q15643 1979 aa9.9□□□□□ -0.83
MRPS28-207ENST00000521434 MAN2B1O00754 1011 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 GDF9O60383 454 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 TSPAN1O60635 241 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 PMLP29590 882 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 RFC5P40937 340 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 CCR3P51677 355 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 NPEPPSP55786 919 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 GRIK3Q13003 919 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 CAMK2BQ13554 666 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 SIM2Q14190 667 aaPredicted RBP9.89□□□□□ -0.83
MRPS28-207ENST00000521434 HSP90AA2PQ14568 343 aaPredicted RBP9.89□□□□□ -0.83
MRPS28-207ENST00000521434 PSMD5Q16401 504 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 UVSSAQ2YD98 709 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 ZNF687Q8N1G0 1237 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 CCDC148Q8NFR7 591 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 LNX1Q8TBB1 728 aaPredicted RBP9.89□□□□□ -0.83
MRPS28-207ENST00000521434 SLC7A14Q8TBB6 771 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 TCP11Q8WWU5 503 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 ING5Q8WYH8 240 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 PIK3R5Q8WYR1 880 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 RABGGTAQ92696 567 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 DNASE1L2Q92874 299 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 CPB2Q96IY4 423 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 CEP170P1Q96L14 293 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 TTPALQ9BTX7 342 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 APOL6Q9BWW8 343 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 PLA2G2FQ9BZM2 168 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 TRIM6Q9C030 488 aaPredicted RBP9.89□□□□□ -0.83
MRPS28-207ENST00000521434 HCFC1R1Q9NWW0 138 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 GDE1Q9NZC3 331 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 DNMT3BQ9UBC3 853 aaKnown RBP9.89□□□□□ -0.83
MRPS28-207ENST00000521434 NAP1L2Q9ULW6 460 aaPredicted RBP9.89□□□□□ -0.83
MRPS28-207ENST00000521434 NDRG2Q9UN36 371 aaKnown RBP9.89□□□□□ -0.83
MRPS28-207ENST00000521434 MRPS23Q9Y3D9 190 aaKnown RBP9.89□□□□□ -0.83
MRPS28-207ENST00000521434 COL4A2P08572 1712 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 DMXL2Q8TDJ6 3036 aa9.89□□□□□ -0.83
MRPS28-207ENST00000521434 ZMYM2Q9UBW7 1377 aa9.88□□□□□ -0.83
MRPS28-207ENST00000521434 CYP3A7-CYP3A51PA0A087WV96 503 aa9.88□□□□□ -0.83
MRPS28-207ENST00000521434 PRPF3O43395 683 aaKnown RBP9.88□□□□□ -0.83
MRPS28-207ENST00000521434 DKC1O60832 514 aaKnown RBP eCLIP9.88□□□□□ -0.83
MRPS28-207ENST00000521434 CYP3A7P24462 503 aa9.88□□□□□ -0.83
MRPS28-207ENST00000521434 AKAP5P24588 427 aa9.88□□□□□ -0.83
MRPS28-207ENST00000521434 QARSP47897 775 aaKnown RBP9.88□□□□□ -0.83
MRPS28-207ENST00000521434 E2F4Q16254 413 aa9.88□□□□□ -0.83
MRPS28-207ENST00000521434 AXDND1Q5T1B0 1012 aaPredicted RBP9.88□□□□□ -0.83
MRPS28-207ENST00000521434 N4BP2L1Q5TBK1 243 aaPredicted RBP9.88□□□□□ -0.83
MRPS28-207ENST00000521434 RNF20Q5VTR2 975 aa9.88□□□□□ -0.83
MRPS28-207ENST00000521434 FAM171A1Q5VUB5 890 aa9.88□□□□□ -0.83
MRPS28-207ENST00000521434 IL31Q6EBC2 164 aa9.88□□□□□ -0.83
MRPS28-207ENST00000521434 PDXDC1Q6P996 788 aa9.88□□□□□ -0.83
MRPS28-207ENST00000521434 RTL10Q7L3V2 364 aa9.88□□□□□ -0.83
MRPS28-207ENST00000521434 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.88□□□□□ -0.83
MRPS28-207ENST00000521434 FERMT3Q86UX7 667 aa9.88□□□□□ -0.83
MRPS28-207ENST00000521434 CEP57Q86XR8 500 aa9.88□□□□□ -0.83
MRPS28-207ENST00000521434 MARVELD3Q96A59 401 aa9.88□□□□□ -0.83
MRPS28-207ENST00000521434 ELSPBP1Q96BH3 223 aa9.88□□□□□ -0.83
MRPS28-207ENST00000521434 MCRS1Q96EZ8 462 aa9.88□□□□□ -0.83
MRPS28-207ENST00000521434 NXF3Q9H4D5 531 aaKnown RBP9.88□□□□□ -0.83
MRPS28-207ENST00000521434 SH2B1Q9NRF2 756 aaPredicted RBP9.88□□□□□ -0.83
MRPS28-207ENST00000521434 AKAP13Q12802 2813 aa9.88□□□□□ -0.83
MRPS28-207ENST00000521434 INO80B-WBP1J3KQ70 363 aa9.87□□□□□ -0.83
MRPS28-207ENST00000521434 EML1O00423 815 aa9.87□□□□□ -0.83
MRPS28-207ENST00000521434 ADAM12O43184 909 aa9.87□□□□□ -0.83
MRPS28-207ENST00000521434 HRO43593 1189 aa9.87□□□□□ -0.83
MRPS28-207ENST00000521434 TDP2O95551 362 aa9.87□□□□□ -0.83
MRPS28-207ENST00000521434 ARF4P18085 180 aaPredicted RBP9.87□□□□□ -0.83
MRPS28-207ENST00000521434 CNR2P34972 360 aa9.87□□□□□ -0.83
MRPS28-207ENST00000521434 CXCL12P48061 93 aa9.87□□□□□ -0.83
MRPS28-207ENST00000521434 LIMK1P53667 647 aa9.87□□□□□ -0.83
MRPS28-207ENST00000521434 PTENP60484 403 aa9.87□□□□□ -0.83
MRPS28-207ENST00000521434 AKAP17AQ02040 695 aaKnown RBP9.87□□□□□ -0.83
MRPS28-207ENST00000521434 ELAVL2Q12926 359 aaKnown RBP9.87□□□□□ -0.83
MRPS28-207ENST00000521434 TUSC3Q13454 348 aa9.87□□□□□ -0.83
MRPS28-207ENST00000521434 RAB33AQ14088 237 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms