RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 GPRASP2Q96D09 838 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 ATG4CQ96DT6 458 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 BORCS6Q96GS4 357 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 TCTN2Q96GX1 697 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 CCDC74BQ96LY2 380 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 TGS1Q96RS0 853 aaKnown RBP4.7□□□□□ -1.66
VPS13B-208ENST00000521037 BRINP2Q9C0B6 783 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 MROH8Q9H579 483 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 GINM1Q9NU53 330 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 IFT57Q9NWB7 429 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 ZNF214Q9UL59 606 aaPredicted RBP4.7□□□□□ -1.66
VPS13B-208ENST00000521037 RIPK3Q9Y572 518 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 CFAP46Q8IYW2 2715 aa4.7□□□□□ -1.66
VPS13B-208ENST00000521037 PDS5AQ29RF7 1337 aaKnown RBP4.7□□□□□ -1.66
VPS13B-208ENST00000521037 FOCADQ5VW36 1801 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 FADS2P1A8MWK0 482 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 ABLIM1O14639 778 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 NBNO60934 754 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 CXCL10P02778 98 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 C6orf222P0C671 652 aaPredicted RBP4.69□□□□□ -1.66
VPS13B-208ENST00000521037 HSD3B2P26439 372 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 SHMT1P34896 483 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 RRP1P56182 461 aaKnown RBP4.69□□□□□ -1.66
VPS13B-208ENST00000521037 NMIQ13287 307 aaPredicted RBP4.69□□□□□ -1.66
VPS13B-208ENST00000521037 ACVR2BQ13705 512 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 COG2Q14746 738 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 RTP5Q14D33 572 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 PTPN21Q16825 1174 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 EPC2Q52LR7 807 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 METTL24Q5JXM2 366 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 MEI1Q5TIA1 1274 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 ZPBP2Q6X784 338 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.69□□□□□ -1.66
VPS13B-208ENST00000521037 BNC2Q6ZN30 1099 aaPredicted RBP4.69□□□□□ -1.66
VPS13B-208ENST00000521037 CEP128Q6ZU80 1094 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 JAZF1Q86VZ6 243 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 LURAP1LQ8IV03 231 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 VN1R2Q8NFZ6 395 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.69□□□□□ -1.66
VPS13B-208ENST00000521037 LPIN2Q92539 896 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 MKL1Q969V6 931 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 RAD9AQ99638 391 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 FOXP3Q9BZS1 431 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 BICC1Q9H694 974 aaKnown RBP4.69□□□□□ -1.66
VPS13B-208ENST00000521037 MYH16Q9H6N6 1097 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 CLDND1Q9NY35 253 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 PI4KBQ9UBF8 816 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 REV1Q9UBZ9 1251 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 FAM184BQ9ULE4 1060 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 MYRFQ9Y2G1 1151 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 POLR3KQ9Y2Y1 108 aaPredicted RBP4.69□□□□□ -1.66
VPS13B-208ENST00000521037 FLT1P17948 1338 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 IL16Q14005 1332 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 CLSPNQ9HAW4 1339 aa4.69□□□□□ -1.66
VPS13B-208ENST00000521037 GRM6O15303 877 aa4.68□□□□□ -1.66
VPS13B-208ENST00000521037 TLR3O15455 904 aaKnown RBP4.68□□□□□ -1.66
VPS13B-208ENST00000521037 BAIAP3O94812 1187 aa4.68□□□□□ -1.66
VPS13B-208ENST00000521037 INSRRP14616 1297 aa4.68□□□□□ -1.66
VPS13B-208ENST00000521037 DNAJB1P25685 340 aa4.68□□□□□ -1.66
VPS13B-208ENST00000521037 RBM10P98175 930 aaKnown RBP4.68□□□□□ -1.66
VPS13B-208ENST00000521037 PAK2Q13177 524 aa4.68□□□□□ -1.66
VPS13B-208ENST00000521037 SERINC3Q13530 473 aa4.68□□□□□ -1.66
VPS13B-208ENST00000521037 SLC14A2Q15849 920 aa4.68□□□□□ -1.66
VPS13B-208ENST00000521037 TRIM71Q2Q1W2 868 aaKnown RBP4.68□□□□□ -1.66
VPS13B-208ENST00000521037 TAPT1Q6NXT6 567 aa4.68□□□□□ -1.66
VPS13B-208ENST00000521037 TMC3Q7Z5M5 1100 aa4.68□□□□□ -1.66
VPS13B-208ENST00000521037 ADGRD2Q7Z7M1 963 aa4.68□□□□□ -1.66
VPS13B-208ENST00000521037 RIOX2Q8IUF8 465 aa4.68□□□□□ -1.66
VPS13B-208ENST00000521037 FOXP4Q8IVH2 680 aaPredicted RBP4.68□□□□□ -1.66
VPS13B-208ENST00000521037 CCAR1Q8IX12 1150 aaKnown RBP4.68□□□□□ -1.66
VPS13B-208ENST00000521037 CKAP2LQ8IYA6 745 aa4.68□□□□□ -1.66
VPS13B-208ENST00000521037 MSL3Q8N5Y2 521 aaKnown RBP4.68□□□□□ -1.66
VPS13B-208ENST00000521037 ZNF655Q8N720 491 aaPredicted RBP4.68□□□□□ -1.66
VPS13B-208ENST00000521037 PCSK9Q8NBP7 692 aaKnown RBP4.68□□□□□ -1.66
VPS13B-208ENST00000521037 TSR2Q969E8 191 aaKnown RBP4.68□□□□□ -1.66
VPS13B-208ENST00000521037 SEC16BQ96JE7 1060 aa4.68□□□□□ -1.66
VPS13B-208ENST00000521037 PWWP2AQ96N64 755 aa4.68□□□□□ -1.66
VPS13B-208ENST00000521037 FBXO28Q9NVF7 368 aa4.68□□□□□ -1.66
VPS13B-208ENST00000521037 TCFL5Q9UL49 500 aa4.68□□□□□ -1.66
VPS13B-208ENST00000521037 PALD1Q9ULE6 856 aa4.68□□□□□ -1.66
VPS13B-208ENST00000521037 RELNP78509 3460 aa4.68□□□□□ -1.66
VPS13B-208ENST00000521037 MYO7AQ13402 2215 aa4.68□□□□□ -1.66
VPS13B-208ENST00000521037 NAV2Q8IVL1 2488 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 A0A1B0GUL7 405 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 C5orf67F2Z3F1 127 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 ENPP3O14638 875 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 RGS13O14921 159 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 UBOX5O94941 541 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 CLSTN1O94985 981 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 MAP4K4O95819 1239 aaPredicted RBP4.67□□□□□ -1.66
VPS13B-208ENST00000521037 F13A1P00488 732 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 FCER1AP12319 257 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 RFC2P35250 354 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 PLP2Q04941 152 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 GABPAQ06546 454 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 COASYQ13057 564 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 KCNC3Q14003 757 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 BMS1Q14692 1282 aaKnown RBP4.67□□□□□ -1.66
VPS13B-208ENST00000521037 TCEAL1Q15170 157 aa4.67□□□□□ -1.66
VPS13B-208ENST00000521037 PTPROQ16827 1216 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms