RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 ELAVL2Q12926 359 aaKnown RBP17.38■□□□□ 0.37
CLN8-205ENST00000520991 MAPK7Q13164 816 aa17.38■□□□□ 0.37
CLN8-205ENST00000520991 NAB2Q15742 525 aa17.38■□□□□ 0.37
CLN8-205ENST00000520991 LARP1BQ659C4 914 aaKnown RBP17.38■□□□□ 0.37
CLN8-205ENST00000520991 ARL6IP4Q66PJ3 421 aaKnown RBP17.38■□□□□ 0.37
CLN8-205ENST00000520991 SMG7Q92540 1137 aaKnown RBP17.38■□□□□ 0.37
CLN8-205ENST00000520991 STAMQ92783 540 aa17.38■□□□□ 0.37
CLN8-205ENST00000520991 PLIN2Q99541 437 aa17.38■□□□□ 0.37
CLN8-205ENST00000520991 ACO2Q99798 780 aaKnown RBP17.38■□□□□ 0.37
CLN8-205ENST00000520991 CCDC94Q9BW85 323 aaPredicted RBP17.38■□□□□ 0.37
CLN8-205ENST00000520991 CDT1Q9H211 546 aa17.38■□□□□ 0.37
CLN8-205ENST00000520991 PIDD1Q9HB75 910 aa17.38■□□□□ 0.37
CLN8-205ENST00000520991 TOPORSQ9NS56 1045 aaPredicted RBP17.38■□□□□ 0.37
CLN8-205ENST00000520991 C2orf16Q68DN1 1984 aa17.38■□□□□ 0.37
CLN8-205ENST00000520991 SFI1A8K8P3 1242 aa17.37■□□□□ 0.37
CLN8-205ENST00000520991 SLC16A4O15374 487 aa17.37■□□□□ 0.37
CLN8-205ENST00000520991 GUCY2CP25092 1073 aa17.37■□□□□ 0.37
CLN8-205ENST00000520991 OSTNP61366 133 aa17.37■□□□□ 0.37
CLN8-205ENST00000520991 NHLH1Q02575 133 aa17.37■□□□□ 0.37
CLN8-205ENST00000520991 STRN3Q13033 797 aa17.37■□□□□ 0.37
CLN8-205ENST00000520991 PSMD5Q16401 504 aa17.37■□□□□ 0.37
CLN8-205ENST00000520991 HYIQ5T013 277 aa17.37■□□□□ 0.37
CLN8-205ENST00000520991 KCTD17Q8N5Z5 321 aa17.37■□□□□ 0.37
CLN8-205ENST00000520991 PIK3R5Q8WYR1 880 aa17.37■□□□□ 0.37
CLN8-205ENST00000520991 PNMA5Q96PV4 448 aa17.37■□□□□ 0.37
CLN8-205ENST00000520991 TCHPQ9BT92 498 aa17.37■□□□□ 0.37
CLN8-205ENST00000520991 TARS2Q9BW92 718 aaKnown RBP17.37■□□□□ 0.37
CLN8-205ENST00000520991 SMOC2Q9H3U7 446 aa17.37■□□□□ 0.37
CLN8-205ENST00000520991 WDR6Q9NNW5 1121 aaKnown RBP17.37■□□□□ 0.37
CLN8-205ENST00000520991 ZDHHC7Q9NXF8 308 aa17.37■□□□□ 0.37
CLN8-205ENST00000520991 CLUHO75153 1309 aa17.36■□□□□ 0.37
CLN8-205ENST00000520991 B3GAT3O94766 335 aa17.36■□□□□ 0.37
CLN8-205ENST00000520991 GBP2P32456 591 aaPredicted RBP17.36■□□□□ 0.37
CLN8-205ENST00000520991 GRM5P41594 1212 aa17.36■□□□□ 0.37
CLN8-205ENST00000520991 SMTNP53814 917 aa17.36■□□□□ 0.37
CLN8-205ENST00000520991 IER5LQ5T953 404 aa17.36■□□□□ 0.37
CLN8-205ENST00000520991 PDXDC1Q6P996 788 aa17.36■□□□□ 0.37
CLN8-205ENST00000520991 TAS1R3Q7RTX0 852 aa17.36■□□□□ 0.37
CLN8-205ENST00000520991 CEP120Q8N960 986 aa17.36■□□□□ 0.37
CLN8-205ENST00000520991 SYT2Q8N9I0 419 aaPredicted RBP17.36■□□□□ 0.37
CLN8-205ENST00000520991 UROC1Q96N76 676 aa17.36■□□□□ 0.37
CLN8-205ENST00000520991 PPP1R10Q96QC0 940 aaKnown RBP17.36■□□□□ 0.37
CLN8-205ENST00000520991 PRRX2Q99811 253 aa17.36■□□□□ 0.37
CLN8-205ENST00000520991 RHOBTB2Q9BYZ6 727 aa17.36■□□□□ 0.37
CLN8-205ENST00000520991 KCNG1Q9UIX4 513 aa17.36■□□□□ 0.37
CLN8-205ENST00000520991 PDGFBP01127 241 aaPredicted RBP17.35■□□□□ 0.37
CLN8-205ENST00000520991 PLA2G4BP0C869 781 aa17.35■□□□□ 0.37
CLN8-205ENST00000520991 MCF2P10911 925 aa17.35■□□□□ 0.37
CLN8-205ENST00000520991 HARSP12081 509 aaKnown RBP17.35■□□□□ 0.37
CLN8-205ENST00000520991 PLS3P13797 630 aa17.35■□□□□ 0.37
CLN8-205ENST00000520991 CLCNKBP51801 687 aa17.35■□□□□ 0.37
CLN8-205ENST00000520991 VCPP55072 806 aaKnown RBP17.35■□□□□ 0.37
CLN8-205ENST00000520991 LIN9Q5TKA1 542 aa17.35■□□□□ 0.37
CLN8-205ENST00000520991 LILRA6Q6PI73 481 aa17.35■□□□□ 0.37
CLN8-205ENST00000520991 MPZL3Q6UWV2 235 aa17.35■□□□□ 0.37
CLN8-205ENST00000520991 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.35■□□□□ 0.37
CLN8-205ENST00000520991 LNX1Q8TBB1 728 aaPredicted RBP17.35■□□□□ 0.37
CLN8-205ENST00000520991 ZNF707Q96C28 371 aaPredicted RBP17.35■□□□□ 0.37
CLN8-205ENST00000520991 AK8Q96MA6 479 aa17.35■□□□□ 0.37
CLN8-205ENST00000520991 PTPRHQ9HD43 1115 aa17.35■□□□□ 0.37
CLN8-205ENST00000520991 KCND2Q9NZV8 630 aa17.35■□□□□ 0.37
CLN8-205ENST00000520991 MYO10Q9HD67 2058 aa17.34■□□□□ 0.37
CLN8-205ENST00000520991 SMIM28A0A1B0GU29 152 aa17.34■□□□□ 0.37
CLN8-205ENST00000520991 TMEM189-UBE2V1I3L0A0 370 aa17.34■□□□□ 0.37
CLN8-205ENST00000520991 BMP15O95972 392 aa17.34■□□□□ 0.37
CLN8-205ENST00000520991 PTPN5P54829 565 aa17.34■□□□□ 0.37
CLN8-205ENST00000520991 SLC12A3P55017 1021 aa17.34■□□□□ 0.37
CLN8-205ENST00000520991 TDGQ13569 410 aa17.34■□□□□ 0.37
CLN8-205ENST00000520991 TMEM119Q4V9L6 283 aa17.34■□□□□ 0.37
CLN8-205ENST00000520991 DCLRE1AQ6PJP8 1040 aa17.34■□□□□ 0.37
CLN8-205ENST00000520991 BRAPQ7Z569 592 aa17.34■□□□□ 0.37
CLN8-205ENST00000520991 PRSS33Q8NF86 280 aa17.34■□□□□ 0.37
CLN8-205ENST00000520991 SPIRE2Q8WWL2 714 aa17.34■□□□□ 0.37
CLN8-205ENST00000520991 CALML4Q96GE6 196 aa17.34■□□□□ 0.37
CLN8-205ENST00000520991 ACAP3Q96P50 834 aa17.34■□□□□ 0.37
CLN8-205ENST00000520991 CLSTN3Q9BQT9 956 aa17.34■□□□□ 0.37
CLN8-205ENST00000520991 PRKD2Q9BZL6 878 aa17.34■□□□□ 0.37
CLN8-205ENST00000520991 KCNK12Q9HB15 430 aa17.34■□□□□ 0.37
CLN8-205ENST00000520991 GOLGA2P5Q9HBQ8 144 aa17.34■□□□□ 0.37
CLN8-205ENST00000520991 SLC38A7Q9NVC3 462 aa17.34■□□□□ 0.37
CLN8-205ENST00000520991 ANKFY1Q9P2R3 1169 aa17.34■□□□□ 0.37
CLN8-205ENST00000520991 KMT2EQ8IZD2 1858 aa17.33■□□□□ 0.37
CLN8-205ENST00000520991 ZDBF2Q9HCK1 2354 aa17.33■□□□□ 0.37
CLN8-205ENST00000520991 VPS37CA5D8V6 355 aaPredicted RBP17.33■□□□□ 0.36
CLN8-205ENST00000520991 SLC26A4O43511 780 aa17.33■□□□□ 0.36
CLN8-205ENST00000520991 TRAPPC3O43617 180 aa17.33■□□□□ 0.36
CLN8-205ENST00000520991 ZMYND10O75800 440 aa17.33■□□□□ 0.36
CLN8-205ENST00000520991 AVPR2P30518 371 aa17.33■□□□□ 0.36
CLN8-205ENST00000520991 UBA7P41226 1012 aa17.33■□□□□ 0.36
CLN8-205ENST00000520991 UPP1Q16831 310 aa17.33■□□□□ 0.36
CLN8-205ENST00000520991 ALYREFQ86V81 257 aaKnown RBP17.33■□□□□ 0.36
CLN8-205ENST00000520991 TMEM161BQ8NDZ6 487 aa17.33■□□□□ 0.36
CLN8-205ENST00000520991 RASSF8Q8NHQ8 419 aa17.33■□□□□ 0.36
CLN8-205ENST00000520991 SNX27Q96L92 541 aa17.33■□□□□ 0.36
CLN8-205ENST00000520991 NTPCRQ9BSD7 190 aaKnown RBP17.33■□□□□ 0.36
CLN8-205ENST00000520991 MFSD1Q9H3U5 465 aa17.33■□□□□ 0.36
CLN8-205ENST00000520991 LARSQ9P2J5 1176 aaKnown RBP17.33■□□□□ 0.36
CLN8-205ENST00000520991 FBXW11Q9UKB1 542 aa17.33■□□□□ 0.36
CLN8-205ENST00000520991 MTCL1Q9Y4B5 1905 aaKnown RBP17.32■□□□□ 0.36
CLN8-205ENST00000520991 NPHP3-ACAD11A0A0J9YXS1 232 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms