RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 ADKP55263 362 aaKnown RBP16.32■□□□□ 0.2
SREK1-209ENST00000520953 GJB7Q6PEY0 223 aa16.32■□□□□ 0.2
SREK1-209ENST00000520953 EFCAB13Q8IY85 973 aa16.32■□□□□ 0.2
SREK1-209ENST00000520953 LSM14BQ9BX40 385 aaKnown RBP16.32■□□□□ 0.2
SREK1-209ENST00000520953 AJAP1Q9UKB5 411 aaPredicted RBP16.32■□□□□ 0.2
SREK1-209ENST00000520953 TET1Q8NFU7 2136 aa16.32■□□□□ 0.2
SREK1-209ENST00000520953 TRIP11Q15643 1979 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 A0A1W2PQC6 194 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 KIAA0391O15091 583 aaKnown RBP16.31■□□□□ 0.2
SREK1-209ENST00000520953 NOL4O94818 638 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 SLC10A6Q3KNW5 377 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 TWF2Q6IBS0 349 aaKnown RBP16.31■□□□□ 0.2
SREK1-209ENST00000520953 ANKRD33Q7Z3H0 272 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 TMC2Q8TDI7 906 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 SEMA4DQ92854 862 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 SCLYQ96I15 445 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 TMEM106CQ9BVX2 250 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 PPP1R12CQ9BZL4 782 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 C11orf49Q9H6J7 331 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 KIAA1586Q9HCI6 787 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 SCN5AQ14524 2016 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 LACTBL1A8MY62 500 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 NBNO60934 754 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 TNNI1P19237 187 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 PON1P27169 355 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 CASP14P31944 242 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 MCCD1P59942 119 aaPredicted RBP16.31■□□□□ 0.2
SREK1-209ENST00000520953 MYL7Q01449 175 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 PAK2Q13177 524 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 TCTN1Q2MV58 587 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 SV2AQ7L0J3 742 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 LRRC8DQ7L1W4 858 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 CCDC150Q8NCX0 1101 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 SMG8Q8ND04 991 aaKnown RBP16.31■□□□□ 0.2
SREK1-209ENST00000520953 ADPGKQ9BRR6 497 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 TTYH3Q9C0H2 523 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 GCNT4Q9P109 453 aa16.31■□□□□ 0.2
SREK1-209ENST00000520953 TTC26A0AVF1 554 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 NFICP08651 508 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 CCL23P55773 120 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 NCBP1Q09161 790 aaKnown RBP16.3■□□□□ 0.2
SREK1-209ENST00000520953 TDRD10Q5VZ19 366 aaKnown RBP16.3■□□□□ 0.2
SREK1-209ENST00000520953 ZNF710Q8N1W2 664 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 TAS1R2Q8TE23 839 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 WNT8AQ9H1J5 351 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 SIX2Q9NPC8 291 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 KLK14Q9P0G3 267 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 ITIH6Q6UXX5 1313 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 CLTAP09496 248 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 SELPP16109 830 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 CYP2C18P33260 490 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 MXI1P50539 228 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 GUCY2FP51841 1108 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 CLDN10P78369 228 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 PPP2R3AQ06190 1150 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 PCBP1Q15365 356 aaKnown RBP eCLIP16.3■□□□□ 0.2
SREK1-209ENST00000520953 EXOC3L4Q17RC7 722 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 LMO3Q8TAP4 145 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 C16orf45Q96MC5 204 aaPredicted RBP16.3■□□□□ 0.2
SREK1-209ENST00000520953 FNBP1Q96RU3 617 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 MTMR12Q9C0I1 747 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 RPF1Q9H9Y2 349 aaKnown RBP16.3■□□□□ 0.2
SREK1-209ENST00000520953 IPPQ9Y573 584 aa16.3■□□□□ 0.2
SREK1-209ENST00000520953 MROH7Q68CQ1 1323 aa16.29■□□□□ 0.2
SREK1-209ENST00000520953 USP27XA6NNY8 438 aa16.29■□□□□ 0.2
SREK1-209ENST00000520953 AXLP30530 894 aa16.29■□□□□ 0.2
SREK1-209ENST00000520953 GRM5P41594 1212 aa16.29■□□□□ 0.2
SREK1-209ENST00000520953 DCAF4L1Q3SXM0 396 aa16.29■□□□□ 0.2
SREK1-209ENST00000520953 C15orf39Q6ZRI6 1047 aa16.29■□□□□ 0.2
SREK1-209ENST00000520953 TC2NQ8N9U0 490 aa16.29■□□□□ 0.2
SREK1-209ENST00000520953 ANKLE1Q8NAG6 615 aa16.29■□□□□ 0.2
SREK1-209ENST00000520953 CAGE1Q8TC20 777 aa16.29■□□□□ 0.2
SREK1-209ENST00000520953 LINC01599Q8WXQ3 324 aa16.29■□□□□ 0.2
SREK1-209ENST00000520953 LPPQ93052 612 aa16.29■□□□□ 0.2
SREK1-209ENST00000520953 CGRRF1Q99675 332 aa16.29■□□□□ 0.2
SREK1-209ENST00000520953 PI4K2AQ9BTU6 479 aa16.29■□□□□ 0.2
SREK1-209ENST00000520953 TRIM6Q9C030 488 aaPredicted RBP16.29■□□□□ 0.2
SREK1-209ENST00000520953 CITO14578 2027 aa16.29■□□□□ 0.2
SREK1-209ENST00000520953 GPR182O15218 404 aa16.28■□□□□ 0.2
SREK1-209ENST00000520953 RECQL4O94761 1208 aa16.28■□□□□ 0.2
SREK1-209ENST00000520953 VNN1O95497 513 aa16.28■□□□□ 0.2
SREK1-209ENST00000520953 C4BPAP04003 597 aaKnown RBP16.28■□□□□ 0.2
SREK1-209ENST00000520953 RPLP2P05387 115 aaKnown RBP16.28■□□□□ 0.2
SREK1-209ENST00000520953 EPC2Q52LR7 807 aa16.28■□□□□ 0.2
SREK1-209ENST00000520953 GLRA4Q5JXX5 417 aa16.28■□□□□ 0.2
SREK1-209ENST00000520953 JADE1Q6IE81 842 aa16.28■□□□□ 0.2
SREK1-209ENST00000520953 GBP6Q6ZN66 633 aa16.28■□□□□ 0.2
SREK1-209ENST00000520953 RTN4RL1Q86UN2 441 aaPredicted RBP16.28■□□□□ 0.2
SREK1-209ENST00000520953 MYRIPQ8NFW9 859 aa16.28■□□□□ 0.2
SREK1-209ENST00000520953 ZMAT2Q96NC0 199 aaKnown RBP16.28■□□□□ 0.2
SREK1-209ENST00000520953 ACAP3Q96P50 834 aa16.28■□□□□ 0.2
SREK1-209ENST00000520953 INTS2Q9H0H0 1204 aaKnown RBP16.28■□□□□ 0.2
SREK1-209ENST00000520953 GANQ9H2C0 597 aa16.28■□□□□ 0.2
SREK1-209ENST00000520953 HIPK3Q9H422 1215 aa16.28■□□□□ 0.2
SREK1-209ENST00000520953 PCDHB2Q9Y5E7 798 aa16.28■□□□□ 0.2
SREK1-209ENST00000520953 CAND2O75155 1236 aa16.28■□□□□ 0.2
SREK1-209ENST00000520953 TRIM21P19474 475 aaKnown RBP16.28■□□□□ 0.2
SREK1-209ENST00000520953 ITGB8P26012 769 aa16.28■□□□□ 0.2
SREK1-209ENST00000520953 AFF1P51825 1210 aaKnown RBP16.28■□□□□ 0.2
SREK1-209ENST00000520953 TFAMQ00059 246 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms