RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 GYG2O15488 501 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 AKAP3O75969 853 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 SKIP12755 728 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 EEF2P13639 858 aaKnown RBP10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 ATP6V1C1P21283 382 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 SH3BGRP55822 239 aaPredicted RBP10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 USP17L24Q0WX57 530 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 SGO2Q562F6 1265 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 CCSAPQ6IQ19 270 aaPredicted RBP10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 USP17L6PQ6QN14 398 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 SCFD1Q8WVM8 642 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 CCDC124Q96CT7 223 aaKnown RBP10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 PRR11Q96HE9 360 aaPredicted RBP10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 FBXO6Q9NRD1 293 aaPredicted RBP10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 CHKBQ9Y259 395 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 MRC1P22897 1456 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 TRIM64CA6NLI5 447 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 BANF1O75531 89 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 FTLP02792 175 aaPredicted RBP10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 SPATA31D3P0C874 917 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 PSMC6P62333 389 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 COG2Q14746 738 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 PPP2R5BQ15173 497 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 LLGL2Q6P1M3 1020 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 SPATA31D4Q6ZUB0 917 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 SAMD3Q8N6K7 520 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 GANQ9H2C0 597 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 PCDH18Q9HCL0 1135 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 ZDHHC18Q9NUE0 388 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 CLIC5Q9NZA1 410 aa10.74□□□□□ -0.69
PDGFRB-207ENST00000520579 MYO3BQ8WXR4 1341 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 PALM3A6NDB9 673 aaPredicted RBP10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 A6NJR5 290 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 PTENP60484 403 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 IL9RQ01113 521 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 KDSRQ06136 332 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 C1orf228Q6PIY5 440 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 TRIM59Q8IWR1 403 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 SRPK1Q96SB4 655 aaKnown RBP10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 RIOK1Q9BRS2 568 aaKnown RBP10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 ETNK2Q9NVF9 386 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 BARHL2Q9NY43 387 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 GRHL1Q9NZI5 618 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 NAALADL1Q9UQQ1 740 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 MYO5AQ9Y4I1 1855 aaKnown RBP10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 TECPR2O15040 1411 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 TMEM247A6NEH6 219 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 MAPK13O15264 365 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 GNA11P29992 359 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 ATXN3P54252 364 aaPredicted RBP10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 IRX4P78413 519 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 PLCB3Q01970 1234 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 CGB2Q6NT52 195 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 COL23A1Q86Y22 540 aaPredicted RBP10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 ANKMY2Q8IV38 441 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 ZDHHC14Q8IZN3 488 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 PGM2Q96G03 612 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 PLVAPQ9BX97 442 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 DDX25Q9UHL0 483 aaKnown RBP10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 COG5Q9UP83 839 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 IVNS1ABPQ9Y6Y0 642 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 LRRC37A3O60309 1634 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 EXOC1LA0A1B0GW35 172 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 SPTLC1O15269 473 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 MAP3K7O43318 606 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 IL4RP24394 825 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 RFC4P35249 363 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 TRPC1P48995 793 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 ITGA8P53708 1063 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 EMC10Q5UCC4 262 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 RNF207Q6ZRF8 634 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 UBL4BQ8N7F7 174 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 BHMTQ93088 406 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 STOML1Q9UBI4 398 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 ANAPC5Q9UJX4 755 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 CROTQ9UKG9 612 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 PACSIN3Q9UKS6 424 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 MTUS1Q9ULD2 1270 aa10.73□□□□□ -0.69
PDGFRB-207ENST00000520579 TMEM94Q12767 1356 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 PASKQ96RG2 1323 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 CCDC195A0A1B0GUA6 201 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 PGM3O95394 542 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 NMT1P30419 496 aaKnown RBP10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 OXCT1P55809 520 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 PDE1CQ14123 709 aaPredicted RBP10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 FOXB2Q5VYV0 432 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 ZBTB46Q86UZ6 589 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 ANKLE1Q8NAG6 615 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 USP6NLQ92738 828 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 SAYSD1Q9NPB0 183 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 MAD2L2Q9UI95 211 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 KAT6AQ92794 2004 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 ARHGAP23Q9P227 1491 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 DIP2AQ14689 1571 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 MROH5Q6ZUA9 1318 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 ARHGAP42A6NI28 874 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 SH3BP5O60239 455 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 SERPINB3P29508 390 aa10.72□□□□□ -0.69
PDGFRB-207ENST00000520579 UBXN2AP68543 259 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms