RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 OR1G1P47890 313 aa12.92□□□□□ -0.34
HPS4-218ENST00000519774 SLC11A1P49279 550 aa12.92□□□□□ -0.34
HPS4-218ENST00000519774 ALDH7A1P49419 539 aaKnown RBP12.92□□□□□ -0.34
HPS4-218ENST00000519774 STK4Q13043 487 aa12.92□□□□□ -0.34
HPS4-218ENST00000519774 PSMD2Q13200 908 aa12.92□□□□□ -0.34
HPS4-218ENST00000519774 ARMCX5Q6P1M9 558 aa12.92□□□□□ -0.34
HPS4-218ENST00000519774 MICALL1Q8N3F8 863 aa12.92□□□□□ -0.34
HPS4-218ENST00000519774 GSTCDQ8NEC7 633 aa12.92□□□□□ -0.34
HPS4-218ENST00000519774 SCFD1Q8WVM8 642 aa12.92□□□□□ -0.34
HPS4-218ENST00000519774 P2RX5Q93086 422 aa12.92□□□□□ -0.34
HPS4-218ENST00000519774 SAAL1Q96ER3 474 aa12.92□□□□□ -0.34
HPS4-218ENST00000519774 SPG21Q9NZD8 308 aa12.92□□□□□ -0.34
HPS4-218ENST00000519774 AGO2Q9UKV8 859 aaKnown RBP12.92□□□□□ -0.34
HPS4-218ENST00000519774 PRG3Q9Y2Y8 225 aaPredicted RBP12.92□□□□□ -0.34
HPS4-218ENST00000519774 PDCD11Q14690 1871 aaKnown RBP12.91□□□□□ -0.34
HPS4-218ENST00000519774 CHD7Q9P2D1 2997 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 CASTOR2A6NHX0 329 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 GOLGA6L22H0YM25 854 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 FGF18O76093 207 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 RHOBTB3O94955 611 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 SMC2O95347 1197 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 THP07101 528 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 GALTP07902 379 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 ADSSP30520 456 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 ACOT2P49753 483 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 PPP2R3AQ06190 1150 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 DSC1Q08554 894 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 KCNB1Q14721 858 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 KYAT1Q16773 422 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 TMEM173Q86WV6 379 aaPredicted RBP12.91□□□□□ -0.34
HPS4-218ENST00000519774 COLGALT2Q8IYK4 626 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 SLC39A11Q8N1S5 342 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 ZNF507Q8TCN5 953 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 SMARCE1Q969G3 411 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 CBWD1Q9BRT8 395 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 TMEM175Q9BSA9 504 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 PCIF1Q9H4Z3 704 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 RPF1Q9H9Y2 349 aaKnown RBP12.91□□□□□ -0.34
HPS4-218ENST00000519774 RTN4Q9NQC3 1192 aaKnown RBP12.91□□□□□ -0.34
HPS4-218ENST00000519774 CACNG4Q9UBN1 327 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 STYXL1Q9Y6J8 313 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 ATG2AQ2TAZ0 1938 aa12.91□□□□□ -0.34
HPS4-218ENST00000519774 SMIM28A0A1B0GU29 152 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 GOLGA8IPA6NC78 632 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 GOLGA8JA6NMD2 632 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 MEFVO15553 781 aaPredicted RBP12.9□□□□□ -0.34
HPS4-218ENST00000519774 FAM189A1O60320 539 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 GARTP22102 1010 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 SPAG1Q07617 926 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 TUSC3Q13454 348 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 ENOX2Q16206 610 aaKnown RBP12.9□□□□□ -0.34
HPS4-218ENST00000519774 PTPROQ16827 1216 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 BMT2Q1RMZ1 405 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 SLC10A6Q3KNW5 377 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 HS2ST1Q7LGA3 356 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 SMYD4Q8IYR2 804 aaPredicted RBP12.9□□□□□ -0.34
HPS4-218ENST00000519774 ZSWIM2Q8NEG5 633 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 SPPL3Q8TCT6 385 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 BCL7CQ8WUZ0 217 aaPredicted RBP12.9□□□□□ -0.34
HPS4-218ENST00000519774 POF1BQ8WVV4 589 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 RABGGTAQ92696 567 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 TMEM169Q96HH4 297 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 PPP1R10Q96QC0 940 aaKnown RBP12.9□□□□□ -0.34
HPS4-218ENST00000519774 FAM213AQ9BRX8 229 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 GOLGA2P5Q9HBQ8 144 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 AGPAT3Q9NRZ7 376 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 LMBRD1Q9NUN5 540 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 RMND1Q9NWS8 449 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 CNTN3Q9P232 1028 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 CPSF3Q9UKF6 684 aaKnown RBP12.9□□□□□ -0.34
HPS4-218ENST00000519774 MAPK8IP1Q9UQF2 711 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 FAN1Q9Y2M0 1017 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 PCDHA5Q9Y5H7 936 aa12.9□□□□□ -0.34
HPS4-218ENST00000519774 ANK1P16157 1881 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 CARNS1A5YM72 827 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 LACTBL1A8MY62 500 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 F8W810 466 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 NRP1O14786 923 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 CLIC2O15247 247 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 TGFB1I1O43294 461 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 KIF20AO95235 890 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 ALDH2P05091 517 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 DNAJB1P25685 340 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 CYP2J2P51589 502 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 KRT17Q04695 432 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 CAMK4Q16566 473 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 KNOP1Q1ED39 458 aaKnown RBP12.89□□□□□ -0.35
HPS4-218ENST00000519774 XKR4Q5GH76 650 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 ISM2Q6H9L7 571 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 ALKAL1Q6UXT8 129 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 PPM1EQ8WY54 764 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 MRPL38Q96DV4 380 aaKnown RBP12.89□□□□□ -0.35
HPS4-218ENST00000519774 KIF12Q96FN5 646 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 IGSF21Q96ID5 467 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 ZMAT2Q96NC0 199 aaKnown RBP12.89□□□□□ -0.35
HPS4-218ENST00000519774 GSDMAQ96QA5 445 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 LMAN2LQ9H0V9 348 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 SLC38A7Q9NVC3 462 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 MTCH2Q9Y6C9 303 aa12.89□□□□□ -0.35
HPS4-218ENST00000519774 PRRC2BQ5JSZ5 2229 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms