RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 VTNP04004 478 aa7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 URODP06132 367 aa7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 KCNA2P16389 499 aa7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 KLRC1P26715 233 aa7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 GDI1P31150 447 aa7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 TDO2P48775 406 aa7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 CRYBB1P53674 252 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 TRIP6Q15654 476 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 RRP12Q5JTH9 1297 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 PDXDC2PQ6P474 469 aa7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 TOGARAM2Q6ZUX3 1019 aa7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 GPR155Q7Z3F1 870 aa7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 ADGRF4Q8IZF3 695 aa7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 TTC8Q8TAM2 541 aa7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 CCER1Q8TC90 406 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 CLUAP1Q96AJ1 413 aa7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 ZSWIM3Q96MP5 696 aa7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 HHIPQ96QV1 700 aa7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 POLMQ9NP87 494 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 CHST7Q9NS84 486 aa7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 TCP11L1Q9NUJ3 509 aa7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 EVLQ9UI08 416 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 FBXW11Q9UKB1 542 aa7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 INPP5FQ9Y2H2 1132 aa7.79□□□□□ -1.16
CTNNA1-216ENST00000519489 NAV3Q8IVL0 2385 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 TSPY2A6NKD2 308 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 SLC38A8A6NNN8 435 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 TERTO14746 1132 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 ADAM12O43184 909 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 FIBPO43427 364 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 CSDE1O75534 798 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 RHOBTB1O94844 696 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 RPLP2P05387 115 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 TOP1P11387 765 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 CR2P20023 1033 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 VIPR2P41587 438 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 DSG1Q02413 1049 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 PPARAQ07869 468 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 DDX10Q13206 875 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 LRRC32Q14392 662 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 PON2Q15165 354 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 ELF2Q15723 593 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 ALDH1L2Q3SY69 923 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 TRIM61Q5EBN2 209 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 NOMO2Q5JPE7 1267 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 FCHSD1Q86WN1 690 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 SEPT1Q8WYJ6 367 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 PIGKQ92643 395 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 TCEAL4Q96EI5 215 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 PSMG3-AS1Q96PY0 264 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 ARID3AQ99856 593 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 SENP7Q9BQF6 1050 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 TRMT61BQ9BVS5 477 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 SMARCAD1Q9H4L7 1026 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 JMJD4Q9H9V9 463 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 ZNF287Q9HBT7 754 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 EXOC6BQ9Y2D4 811 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 MRPL11Q9Y3B7 192 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 KIF26AQ9ULI4 1882 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 OTOGQ6ZRI0 2925 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 WDR81Q562E7 1941 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 FRMPD4Q14CM0 1322 aa7.78□□□□□ -1.16
CTNNA1-216ENST00000519489 MUC22E2RYF6 1773 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-216ENST00000519489 ERVH48-1M5A8F1 160 aa7.77□□□□□ -1.17
CTNNA1-216ENST00000519489 GPAA1O43292 621 aa7.77□□□□□ -1.17
CTNNA1-216ENST00000519489 ZNF862O60290 1169 aa7.77□□□□□ -1.17
CTNNA1-216ENST00000519489 RDXP35241 583 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-216ENST00000519489 GLUD2P49448 558 aa7.77□□□□□ -1.17
CTNNA1-216ENST00000519489 SLC35G1Q2M3R5 365 aa7.77□□□□□ -1.17
CTNNA1-216ENST00000519489 TAF1BQ53T94 588 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-216ENST00000519489 DGKKQ5KSL6 1271 aa7.77□□□□□ -1.17
CTNNA1-216ENST00000519489 FAM43BQ6ZT52 329 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-216ENST00000519489 CYP2U1Q7Z449 544 aa7.77□□□□□ -1.17
CTNNA1-216ENST00000519489 IRF7Q92985 503 aa7.77□□□□□ -1.17
CTNNA1-216ENST00000519489 CHFRQ96EP1 664 aa7.77□□□□□ -1.17
CTNNA1-216ENST00000519489 API5Q9BZZ5 524 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-216ENST00000519489 DPP7Q9UHL4 492 aa7.77□□□□□ -1.17
CTNNA1-216ENST00000519489 POLIQ9UNA4 740 aa7.77□□□□□ -1.17
CTNNA1-216ENST00000519489 PRG3Q9Y2Y8 225 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-216ENST00000519489 PCDHB15Q9Y5E8 787 aa7.77□□□□□ -1.17
CTNNA1-216ENST00000519489 MYBPHLA2RUH7 354 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 CLEC18AA5D8T8 446 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 SPECC1L-ADORA2AF8WAN1 911 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 RANBP6O60518 1105 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 CBFA2T3O75081 653 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 GJB3O75712 270 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 DKK1O94907 266 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 C1RP00736 705 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 C8AP07357 584 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 ADSSP30520 456 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 CCR2P41597 374 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 PHKA2P46019 1235 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 UBAP2LQ14157 1087 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 KRTAP21-3Q3LHN1 58 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 PABPC1LQ4VXU2 614 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 PDXDC1Q6P996 788 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 PRSS55Q6UWB4 352 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 CLEC18BQ6UXF7 455 aa7.76□□□□□ -1.17
CTNNA1-216ENST00000519489 PRICKLE2Q7Z3G6 844 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms