RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 PCF11O94913 1555 aaKnown RBP4.3□□□□□ -1.72
CSMD3-209ENST00000519485 CFTRP13569 1480 aa4.3□□□□□ -1.72
CSMD3-209ENST00000519485 TCOF1Q13428 1488 aaKnown RBP4.3□□□□□ -1.72
CSMD3-209ENST00000519485 SPATA31E1Q6ZUB1 1445 aa4.29□□□□□ -1.72
CSMD3-209ENST00000519485 MAST3O60307 1309 aa4.29□□□□□ -1.72
CSMD3-209ENST00000519485 LEFTY2O00292 366 aa4.29□□□□□ -1.72
CSMD3-209ENST00000519485 SEC24DO94855 1032 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-209ENST00000519485 NDUFA10O95299 355 aa4.29□□□□□ -1.72
CSMD3-209ENST00000519485 HLA-DOAP06340 250 aa4.29□□□□□ -1.72
CSMD3-209ENST00000519485 MYCLP1P12525 358 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-209ENST00000519485 CD40P25942 277 aa4.29□□□□□ -1.72
CSMD3-209ENST00000519485 CXCR5P32302 372 aa4.29□□□□□ -1.72
CSMD3-209ENST00000519485 CASRP41180 1078 aa4.29□□□□□ -1.72
CSMD3-209ENST00000519485 TAS1R1Q7RTX1 841 aa4.29□□□□□ -1.72
CSMD3-209ENST00000519485 C11orf74Q86VG3 221 aa4.29□□□□□ -1.72
CSMD3-209ENST00000519485 SRRM1Q8IYB3 904 aaKnown RBP4.29□□□□□ -1.72
CSMD3-209ENST00000519485 CPEB3Q8NE35 698 aaKnown RBP4.29□□□□□ -1.72
CSMD3-209ENST00000519485 OR5M3Q8NGP4 307 aa4.29□□□□□ -1.72
CSMD3-209ENST00000519485 EXOC6Q8TAG9 804 aa4.29□□□□□ -1.72
CSMD3-209ENST00000519485 LEO1Q8WVC0 666 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-209ENST00000519485 ADAM2Q99965 735 aa4.29□□□□□ -1.72
CSMD3-209ENST00000519485 MTFR1LQ9H019 292 aa4.29□□□□□ -1.72
CSMD3-209ENST00000519485 EPC1Q9H2F5 836 aa4.29□□□□□ -1.72
CSMD3-209ENST00000519485 POFUT1Q9H488 388 aa4.29□□□□□ -1.72
CSMD3-209ENST00000519485 USP36Q9P275 1121 aaKnown RBP4.29□□□□□ -1.72
CSMD3-209ENST00000519485 HDAC5Q9UQL6 1122 aa4.29□□□□□ -1.72
CSMD3-209ENST00000519485 TMA7Q9Y2S6 64 aaKnown RBP4.29□□□□□ -1.72
CSMD3-209ENST00000519485 COL3A1P02461 1466 aaPredicted RBP4.29□□□□□ -1.72
CSMD3-209ENST00000519485 KDM5BQ9UGL1 1544 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 ST20-MTHFSA0A0A6YYL1 179 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 PRR5-ARHGAP8B1AHC4 643 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 RAB11FIP3O75154 756 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 CLSTN1O94985 981 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 LY86O95711 162 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 POU3F2P20265 443 aaPredicted RBP4.28□□□□□ -1.72
CSMD3-209ENST00000519485 DDX6P26196 483 aaKnown RBP eCLIP4.28□□□□□ -1.72
CSMD3-209ENST00000519485 MGAT1P26572 445 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 MPLP40238 635 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 DSG1Q02413 1049 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 NHLH2Q02577 135 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 CALD1Q05682 793 aaKnown RBP4.28□□□□□ -1.72
CSMD3-209ENST00000519485 CD69Q07108 199 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 MPP3Q13368 585 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 CCDC178Q5BJE1 867 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 CREB3L3Q68CJ9 461 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 UNQ6494/PRO21346Q6UXR6 183 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 KIAA0907Q7Z7F0 614 aaPredicted RBP4.28□□□□□ -1.72
CSMD3-209ENST00000519485 SYT12Q8IV01 421 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 EFHBQ8N7U6 833 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 CAGE1Q8TC20 777 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 ORAI3Q9BRQ5 295 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 MYL10Q9BUA6 226 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 SPATA5L1Q9BVQ7 753 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 RSAD1Q9HA92 442 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 SCAPERQ9BY12 1400 aa4.28□□□□□ -1.72
CSMD3-209ENST00000519485 CGNL1Q0VF96 1302 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 CTTNBP2Q8WZ74 1663 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 TLDC2A0PJX2 215 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 B5MCH6 92 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 ENPP3O14638 875 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 PDE8AO60658 829 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 RBMXL2O75526 392 aaKnown RBP4.27□□□□□ -1.73
CSMD3-209ENST00000519485 SPATA31D3P0C874 917 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 HSP90B1P14625 803 aaKnown RBP4.27□□□□□ -1.73
CSMD3-209ENST00000519485 GPR15P49685 360 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 GYS2P54840 703 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 DUSP2Q05923 314 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 TAF3Q5VWG9 929 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 SPATA31D4Q6ZUB0 917 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 ESPNLQ6ZVH7 1005 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 CDYL2Q8N8U2 506 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 ASB10Q8WXI3 467 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 USP7Q93009 1102 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 FERMT2Q96AC1 680 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 FUBP1Q96AE4 644 aaKnown RBP4.27□□□□□ -1.73
CSMD3-209ENST00000519485 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.27□□□□□ -1.73
CSMD3-209ENST00000519485 MSRAQ9UJ68 235 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 TBX22Q9Y458 520 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 PCDHB6Q9Y5E3 794 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 DHX29Q7Z478 1369 aaKnown RBP4.27□□□□□ -1.73
CSMD3-209ENST00000519485 USP47Q96K76 1375 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 ANKRD30BQ9BXX2 1392 aa4.27□□□□□ -1.73
CSMD3-209ENST00000519485 ARHGEF12Q9NZN5 1544 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 MYPNQ86TC9 1320 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 KIF14Q15058 1648 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 FAM83GA6ND36 823 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 FRAT2O75474 233 aaPredicted RBP4.26□□□□□ -1.73
CSMD3-209ENST00000519485 PCDH8O95206 1070 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 SPDEFO95238 335 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 FKBP9O95302 570 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 RBP3P10745 1247 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 MSNP26038 577 aaKnown RBP4.26□□□□□ -1.73
CSMD3-209ENST00000519485 CTGFP29279 349 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 LSP1P33241 339 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 MCM5P33992 734 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 PTH2RP49190 550 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 RNASE9P60153 205 aaKnown RBP4.26□□□□□ -1.73
CSMD3-209ENST00000519485 LRRC32Q14392 662 aa4.26□□□□□ -1.73
CSMD3-209ENST00000519485 SEPT7Q16181 437 aaKnown RBP4.26□□□□□ -1.73
CSMD3-209ENST00000519485 CCDC184Q52MB2 194 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms