RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	VNN1	O95497	513 aa		13.3	□□□□□ -0.28
SPIDR-210	ENST00000519362	HLA-DRA	P01903	254 aa		13.3	□□□□□ -0.28
SPIDR-210	ENST00000519362	CYP1A2	P05177	515 aa		13.3	□□□□□ -0.28
SPIDR-210	ENST00000519362	EFNA5	P52803	228 aa		13.3	□□□□□ -0.28
SPIDR-210	ENST00000519362	ERVK-9	P63128	1117 aa		13.3	□□□□□ -0.28
SPIDR-210	ENST00000519362	GUCY2D	Q02846	1103 aa		13.3	□□□□□ -0.28
SPIDR-210	ENST00000519362	NNT	Q13423	1086 aa		13.3	□□□□□ -0.28
SPIDR-210	ENST00000519362	MKRN4P	Q13434	485 aa	Predicted RBP	13.3	□□□□□ -0.28
SPIDR-210	ENST00000519362	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.3	□□□□□ -0.28
SPIDR-210	ENST00000519362	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
SPIDR-210	ENST00000519362	KLHL7	Q8IXQ5	586 aa		13.3	□□□□□ -0.28
SPIDR-210	ENST00000519362	SHCBP1	Q8NEM2	672 aa		13.3	□□□□□ -0.28
SPIDR-210	ENST00000519362	ATP8B4	Q8TF62	1192 aa		13.3	□□□□□ -0.28
SPIDR-210	ENST00000519362	C1orf112	Q9NSG2	853 aa		13.3	□□□□□ -0.28
SPIDR-210	ENST00000519362	FAM170A	A1A519	330 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	AGPS	O00116	658 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	KRIT1	O00522	736 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	FAM189A1	O60320	539 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	CARS	P49589	748 aa	Known RBP	13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	HSP90B2P	Q58FF3	399 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	TRIM50	Q86XT4	487 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	FBXO16	Q8IX29	292 aa	Predicted RBP	13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	EIF1AD	Q8N9N8	165 aa	Known RBP	13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	TCP11	Q8WWU5	503 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	CASKIN2	Q8WXE0	1202 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	GLG1	Q92896	1179 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	CCDC102A	Q96A19	550 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	RPS6KC1	Q96S38	1066 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	CGRRF1	Q99675	332 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	AP1M1	Q9BXS5	423 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	ANKFY1	Q9P2R3	1169 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	GTF3C4	Q9UKN8	822 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	ESYT3	A0FGR9	886 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	TTLL13P	A6NNM8	815 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	MIF4GD	A9UHW6	222 aa	Known RBP	13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	NOP56	O00567	594 aa	Known RBP	13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	SART1	O43290	800 aa	Known RBP	13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	ITGA4	P13612	1032 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	MARK3	P27448	753 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	SLC26A2	P50443	739 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	SNAPC2	Q13487	334 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	PLCB4	Q15147	1175 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	CLEC16A	Q2KHT3	1053 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	WDR44	Q5JSH3	913 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	ACAD10	Q6JQN1	1059 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	EXOC8	Q8IYI6	725 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	ALG3	Q92685	438 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	ADAM21	Q9UKJ8	722 aa		13.29	□□□□□ -0.28
SPIDR-210	ENST00000519362	CLDN3	O15551	220 aa		13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	TOM1L1	O75674	476 aa		13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	CLSTN1	O94985	981 aa		13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	FGG	P02679	453 aa		13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	UNG	P13051	313 aa	Predicted RBP	13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	KRT5	P13647	590 aa		13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	ACO1	P21399	889 aa	Known RBP	13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	PIK3CA	P42336	1068 aa		13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	POU5F1	Q01860	360 aa	Known RBP	13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	LAMTOR4	Q0VGL1	99 aa		13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	PAK2	Q13177	524 aa		13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	MXD4	Q14582	209 aa	Predicted RBP	13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	ZNF677	Q86XU0	584 aa		13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	DHX37	Q8IY37	1157 aa	Known RBP	13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	CD101	Q93033	1021 aa		13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	ZBTB9	Q96C00	473 aa		13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	RNPC3	Q96LT9	517 aa	Known RBP	13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	SPATA33	Q96N06	139 aa		13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	MRPL4	Q9BYD3	311 aa	Known RBP	13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	DDX47	Q9H0S4	455 aa	Known RBP	13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	SLITRK6	Q9H5Y7	841 aa		13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	APOBEC3G	Q9HC16	384 aa	Known RBP	13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	VPS18	Q9P253	973 aa		13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	UVRAG	Q9P2Y5	699 aa		13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	NFU1	Q9UMS0	254 aa		13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	FAN1	Q9Y2M0	1017 aa		13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	PCDHB2	Q9Y5E7	798 aa		13.28	□□□□□ -0.28
SPIDR-210	ENST00000519362	GOLGA6B	A6NDN3	693 aa		13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	ABLIM1	O14639	778 aa		13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	ATMIN	O43313	823 aa	Predicted RBP	13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	CYP2C19	P33261	490 aa		13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	GGCX	P38435	758 aa		13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	GYS2	P54840	703 aa		13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	GRM1	Q13255	1194 aa		13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	BIRC3	Q13489	604 aa		13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	TRADD	Q15628	312 aa		13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	TMEM63B	Q5T3F8	832 aa		13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	BRSK2	Q8IWQ3	736 aa		13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	OR5B17	Q8NGF7	314 aa		13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	ZNF564	Q8TBZ8	553 aa	Predicted RBP	13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	COPS5	Q92905	334 aa		13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	EXOC4	Q96A65	974 aa		13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	ZNF653	Q96CK0	615 aa		13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	ACO2	Q99798	780 aa	Known RBP	13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	NUP85	Q9BW27	656 aa		13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	PLEKHA4	Q9H4M7	779 aa		13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	PSD3	Q9NYI0	1048 aa		13.27	□□□□□ -0.28
SPIDR-210	ENST00000519362	CHORDC1	Q9UHD1	332 aa	Predicted RBP	13.27	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms