RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 EDRF1Q3B7T1 1238 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 HERC4Q5GLZ8 1057 aaPredicted RBP8.29□□□□□ -1.08
SDCBP-206ENST00000519115 NOMO2Q5JPE7 1267 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 FAM26FQ5R3K3 315 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 SLC27A1Q6PCB7 646 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 LRRC55Q6ZSA7 311 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 C11orf57Q6ZUT1 292 aaPredicted RBP8.29□□□□□ -1.08
SDCBP-206ENST00000519115 EPM2AIP1Q7L775 607 aaPredicted RBP8.29□□□□□ -1.08
SDCBP-206ENST00000519115 SFR1Q86XK3 245 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 FAM114A1Q8IWE2 563 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 GRAMD1CQ8IYS0 662 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 MYCT1Q8N699 235 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 COLGALT1Q8NBJ5 622 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 TMEM161BQ8NDZ6 487 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 ANKRD20A12PQ8NF67 263 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 ZNF507Q8TCN5 953 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 IQCDQ96DY2 449 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 PRIMPOLQ96LW4 560 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 C11orf84Q9BUA3 381 aaPredicted RBP8.29□□□□□ -1.08
SDCBP-206ENST00000519115 TARS2Q9BW92 718 aaKnown RBP8.29□□□□□ -1.08
SDCBP-206ENST00000519115 STRA6Q9BX79 667 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 GBP3Q9H0R5 595 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 CWH43Q9H720 699 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 RSAD1Q9HA92 442 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 ALG13Q9NP73 1137 aaKnown RBP8.29□□□□□ -1.08
SDCBP-206ENST00000519115 TBC1D13Q9NVG8 400 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 PCDHB8Q9UN66 801 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 TRAF3IP3Q9Y228 551 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 RWDD3Q9Y3V2 267 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 MTCH2Q9Y6C9 303 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 ANK1P16157 1881 aa8.29□□□□□ -1.08
SDCBP-206ENST00000519115 C5orf67F2Z3F1 127 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 H3BNC9 293 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 BIN1O00499 593 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 B4GALT3O60512 393 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 ZC3H11AO75152 810 aaKnown RBP eCLIP8.28□□□□□ -1.08
SDCBP-206ENST00000519115 OFD1O75665 1012 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 ITGB1P05556 798 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 HARSP12081 509 aaKnown RBP8.28□□□□□ -1.08
SDCBP-206ENST00000519115 IDEP14735 1019 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 LAG3P18627 525 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 AKAP5P24588 427 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 NMT1P30419 496 aaKnown RBP8.28□□□□□ -1.08
SDCBP-206ENST00000519115 DEKP35659 375 aaKnown RBP8.28□□□□□ -1.08
SDCBP-206ENST00000519115 MLH1P40692 756 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 SMTNP53814 917 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 MARSP56192 900 aaKnown RBP8.28□□□□□ -1.08
SDCBP-206ENST00000519115 FKBP3Q00688 224 aaKnown RBP8.28□□□□□ -1.08
SDCBP-206ENST00000519115 RNASELQ05823 741 aaKnown RBP8.28□□□□□ -1.08
SDCBP-206ENST00000519115 PPP2R3AQ06190 1150 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 COASYQ13057 564 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 ZNF568Q3ZCX4 644 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 ATF7IP2Q5U623 682 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 CDKAL1Q5VV42 579 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 ZNF720Q7Z2F6 126 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 HAUS6Q7Z4H7 955 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 FILIP1Q7Z7B0 1213 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 MRPL10Q7Z7H8 261 aaKnown RBP8.28□□□□□ -1.08
SDCBP-206ENST00000519115 ZBTB33Q86T24 672 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 LUZP1Q86V48 1076 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 ZC3H3Q8IXZ2 948 aaKnown RBP8.28□□□□□ -1.08
SDCBP-206ENST00000519115 THNSL1Q8IYQ7 743 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 KLHL23Q8NBE8 558 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 URGCPQ8TCY9 931 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 PGBD4Q96DM1 585 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 ZFP42Q96MM3 310 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 CEP63Q96MT8 703 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 ZNF558Q96NG5 402 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 GAD1Q99259 594 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 TSG101Q99816 390 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 ADPGKQ9BRR6 497 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 MRPL9Q9BYD2 267 aaKnown RBP8.28□□□□□ -1.08
SDCBP-206ENST00000519115 MRPL4Q9BYD3 311 aaKnown RBP8.28□□□□□ -1.08
SDCBP-206ENST00000519115 BLZF1Q9H2G9 400 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 TMEM134Q9H6X4 195 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 KLK14Q9P0G3 267 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 TBC1D7Q9P0N9 293 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 ANKFY1Q9P2R3 1169 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 IMPACTQ9P2X3 320 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 PARP2Q9UGN5 583 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 GDAQ9Y2T3 454 aa8.28□□□□□ -1.08
SDCBP-206ENST00000519115 ARL5CA6NH57 179 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 GOLGA6L6A8MZA4 724 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 NT5C1B-RDH14C9J2C7 533 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 MAPK13O15264 365 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 FGF18O76093 207 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 RECQL4O94761 1208 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 POMCP01189 267 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 RB1P06400 928 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 RPL13P26373 211 aaKnown RBP8.27□□□□□ -1.09
SDCBP-206ENST00000519115 SCNN1GP51170 649 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 NCKAP1LP55160 1127 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 OSTNP61366 133 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 GTF2BQ00403 316 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 STRN3Q13033 797 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 SKIV2LQ15477 1246 aaKnown RBP8.27□□□□□ -1.09
SDCBP-206ENST00000519115 KNOP1Q1ED39 458 aaKnown RBP8.27□□□□□ -1.09
SDCBP-206ENST00000519115 DCAF4L1Q3SXM0 396 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 TTI2Q6NXR4 508 aa8.27□□□□□ -1.09
SDCBP-206ENST00000519115 KCNT2Q6UVM3 1135 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms