RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 CYP3A5P20815 502 aa10.29□□□□□ -0.76
CLN8-203ENST00000518780 PAX3P23760 479 aa10.29□□□□□ -0.76
CLN8-203ENST00000518780 EPHB4P54760 987 aa10.29□□□□□ -0.76
CLN8-203ENST00000518780 CYP24A1Q07973 514 aa10.29□□□□□ -0.76
CLN8-203ENST00000518780 NCAPHQ15003 741 aa10.29□□□□□ -0.76
CLN8-203ENST00000518780 ENOX2Q16206 610 aaKnown RBP10.29□□□□□ -0.76
CLN8-203ENST00000518780 TCTN1Q2MV58 587 aa10.29□□□□□ -0.76
CLN8-203ENST00000518780 SLC10A6Q3KNW5 377 aa10.29□□□□□ -0.76
CLN8-203ENST00000518780 AGMOQ6ZNB7 445 aa10.29□□□□□ -0.76
CLN8-203ENST00000518780 CBWD2Q8IUF1 395 aa10.29□□□□□ -0.76
CLN8-203ENST00000518780 ABI1Q8IZP0 508 aa10.29□□□□□ -0.76
CLN8-203ENST00000518780 URGCPQ8TCY9 931 aa10.29□□□□□ -0.76
CLN8-203ENST00000518780 CACTINQ8WUQ7 758 aaKnown RBP10.29□□□□□ -0.76
CLN8-203ENST00000518780 SAAL1Q96ER3 474 aa10.29□□□□□ -0.76
CLN8-203ENST00000518780 BORCS6Q96GS4 357 aa10.29□□□□□ -0.76
CLN8-203ENST00000518780 SNX27Q96L92 541 aa10.29□□□□□ -0.76
CLN8-203ENST00000518780 FNBP1Q96RU3 617 aa10.29□□□□□ -0.76
CLN8-203ENST00000518780 UBE2OQ9C0C9 1292 aaKnown RBP10.29□□□□□ -0.76
CLN8-203ENST00000518780 TMEM117Q9H0C3 514 aa10.29□□□□□ -0.76
CLN8-203ENST00000518780 NXF3Q9H4D5 531 aaKnown RBP10.29□□□□□ -0.76
CLN8-203ENST00000518780 CBX8Q9HC52 389 aa10.29□□□□□ -0.76
CLN8-203ENST00000518780 GOLGA8IPA6NC78 632 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 ARL5CA6NH57 179 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 GOLGA8JA6NMD2 632 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 ZBBXA8MT70 800 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 PMM2O15305 246 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 OFD1O75665 1012 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 DGKIO75912 1065 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 THP07101 528 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 TPM2P07951 284 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 AKAP5P24588 427 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 CASP4P49662 377 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 VAMP7P51809 220 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 OSTNP61366 133 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 BFSP1Q12934 665 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 DUOXA2Q1HG44 320 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 CCDC40Q4G0X9 1142 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 CDKAL1Q5VV42 579 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.28□□□□□ -0.76
CLN8-203ENST00000518780 WDR49Q8IV35 697 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 TRIM59Q8IWR1 403 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 DHX40Q8IX18 779 aaKnown RBP10.28□□□□□ -0.76
CLN8-203ENST00000518780 AOPEPQ8N6M6 819 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 CEP120Q8N960 986 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 RDH13Q8NBN7 331 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 PARD3BQ8TEW8 1205 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 RPS6KC1Q96S38 1066 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 FANCLQ9NW38 375 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 UBQLN1Q9UMX0 589 aaKnown RBP10.28□□□□□ -0.76
CLN8-203ENST00000518780 HES2Q9Y543 173 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 INSL6Q9Y581 213 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 MYH11P35749 1972 aa10.28□□□□□ -0.76
CLN8-203ENST00000518780 TANC1Q9C0D5 1861 aa10.27□□□□□ -0.76
CLN8-203ENST00000518780 SMIM28A0A1B0GU29 152 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 A0A1W2PPC1 479 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 LACTBL1A8MY62 500 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 P4HA2O15460 535 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 N4BP1O75113 896 aaKnown RBP10.27□□□□□ -0.77
CLN8-203ENST00000518780 GJB5O95377 273 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 CXCL8P10145 99 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 ATP2A2P16615 1042 aaKnown RBP10.27□□□□□ -0.77
CLN8-203ENST00000518780 ZNF18P17022 549 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 CDK11BP21127 795 aaKnown RBP10.27□□□□□ -0.77
CLN8-203ENST00000518780 RPL9P32969 192 aaKnown RBP10.27□□□□□ -0.77
CLN8-203ENST00000518780 TNFSF9P41273 254 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 HTRA4P83105 476 aaPredicted RBP10.27□□□□□ -0.77
CLN8-203ENST00000518780 CETN1Q12798 172 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 GRIK3Q13003 919 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 ZBTB6Q15916 424 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 TCP11X2Q5H9J9 407 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 NOMO2Q5JPE7 1267 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 ZBTB41Q5SVQ8 909 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 SMYD5Q6GMV2 418 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 IRF2BP1Q8IU81 584 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 TMEM192Q8IY95 271 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 CMTR2Q8IYT2 770 aaKnown RBP10.27□□□□□ -0.77
CLN8-203ENST00000518780 RNF169Q8NCN4 708 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 BEST2Q8NFU1 509 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 ZNF689Q96CS4 500 aaPredicted RBP10.27□□□□□ -0.77
CLN8-203ENST00000518780 DDX27Q96GQ7 796 aaKnown RBP10.27□□□□□ -0.77
CLN8-203ENST00000518780 CNOT6LQ96LI5 555 aaKnown RBP10.27□□□□□ -0.77
CLN8-203ENST00000518780 RNPC3Q96LT9 517 aaKnown RBP10.27□□□□□ -0.77
CLN8-203ENST00000518780 UROC1Q96N76 676 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 GAD1Q99259 594 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 RAD9AQ99638 391 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 CGRRF1Q99675 332 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 APOL6Q9BWW8 343 aa10.27□□□□□ -0.77
CLN8-203ENST00000518780 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.27□□□□□ -0.77
CLN8-203ENST00000518780 SIP14410 1827 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 KCNJ18B7U540 433 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 TNNC2P02585 160 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 TNNI1P19237 187 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 MLH1P40692 756 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 MTIF2P46199 727 aaKnown RBP10.26□□□□□ -0.77
CLN8-203ENST00000518780 DEFB103AP81534 67 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 KCNJ12Q14500 433 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 TMEM132DQ14C87 1099 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 MAN2A1Q16706 1144 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 UVSSAQ2YD98 709 aa10.26□□□□□ -0.77
CLN8-203ENST00000518780 SEZ6Q53EL9 994 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms