RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 MFSD14BQ5SR56 506 aa5.74□□□□□ -1.49
SQLE-202ENST00000518604 ERICH6BQ5W0A0 696 aa5.74□□□□□ -1.49
SQLE-202ENST00000518604 CCSAPQ6IQ19 270 aaPredicted RBP5.74□□□□□ -1.49
SQLE-202ENST00000518604 CHST15Q7LFX5 561 aaPredicted RBP5.74□□□□□ -1.49
SQLE-202ENST00000518604 ANKRD35Q8N283 1001 aa5.74□□□□□ -1.49
SQLE-202ENST00000518604 ZGPATQ8N5A5 531 aaKnown RBP5.74□□□□□ -1.49
SQLE-202ENST00000518604 RBM15Q96T37 977 aaKnown RBP eCLIP5.74□□□□□ -1.49
SQLE-202ENST00000518604 SSBP3Q9BWW4 388 aaPredicted RBP5.74□□□□□ -1.49
SQLE-202ENST00000518604 TMEM60Q9H2L4 133 aa5.74□□□□□ -1.49
SQLE-202ENST00000518604 ADAM7Q9H2U9 754 aa5.74□□□□□ -1.49
SQLE-202ENST00000518604 LDAHQ9H6V9 325 aa5.74□□□□□ -1.49
SQLE-202ENST00000518604 FAM204AQ9H8W3 233 aa5.74□□□□□ -1.49
SQLE-202ENST00000518604 STXBP5LQ9Y2K9 1186 aa5.74□□□□□ -1.49
SQLE-202ENST00000518604 ZMYM3Q14202 1370 aa5.74□□□□□ -1.49
SQLE-202ENST00000518604 TBKBP1A7MCY6 615 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 PATE3B3GLJ2 98 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 UBXN7O94888 489 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 HRGP04196 525 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 ALDH2P05091 517 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 SYN1P17600 705 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 GNAT2P19087 354 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 HOXA5P20719 270 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 PCSK1P29120 753 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 GNALP38405 381 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 MAP2K6P52564 334 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 TBX4P57082 545 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 HHEXQ03014 270 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 FOXL1Q12952 345 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 NOGQ13253 232 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 KHDC1Q4VXA5 237 aaKnown RBP5.73□□□□□ -1.49
SQLE-202ENST00000518604 DACT2Q5SW24 774 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 AFMIDQ63HM1 303 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 SEM1Q6ZVN7 128 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 TTLL10Q6ZVT0 673 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 PLXDC1Q8IUK5 500 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 FUKQ8N0W3 1084 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 FAM43AQ8N2R8 423 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 DNERQ8NFT8 737 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 STON2Q8WXE9 905 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 TTC17Q96AE7 1141 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 CEP95Q96GE4 821 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 CGRRF1Q99675 332 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 KCNH6Q9H252 994 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 HDAC5Q9UQL6 1122 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 ACTL7AQ9Y615 435 aa5.73□□□□□ -1.49
SQLE-202ENST00000518604 A0A088AWK7 358 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 CXorf49A8MYA2 514 aaPredicted RBP5.72□□□□□ -1.49
SQLE-202ENST00000518604 FAM227AF5H4B4 570 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 FOXS1O43638 330 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 B3GALT2O43825 422 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 ATP5JP18859 108 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 MALP21145 153 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 SMARCA1P28370 1054 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 MSX2P35548 267 aaPredicted RBP5.72□□□□□ -1.49
SQLE-202ENST00000518604 AGFG1P52594 562 aaKnown RBP5.72□□□□□ -1.49
SQLE-202ENST00000518604 CLRN1P58418 232 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 CREMQ03060 361 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 BMT2Q1RMZ1 405 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 HS1BP3Q53T59 392 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 DRICH1Q6PGQ1 229 aaPredicted RBP5.72□□□□□ -1.49
SQLE-202ENST00000518604 SPOCD1Q6ZMY3 1216 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 GPRIN1Q7Z2K8 1008 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 LIMS2Q7Z4I7 341 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 D2HGDHQ8N465 521 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 ZBTB34Q8NCN2 500 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 MDGA1Q8NFP4 955 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 ZFP28Q8NHY6 868 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 KLHDC4Q8TBB5 520 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 ST8SIA2Q92186 375 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 MIEF2Q96C03 454 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 FAM89AQ96GI7 184 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 TMEM176AQ96HP8 235 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 MRI1Q9BV20 369 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 WDCPQ9H6R7 721 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 SIDT1Q9NXL6 827 aaKnown RBP5.72□□□□□ -1.49
SQLE-202ENST00000518604 GABBR1Q9UBS5 961 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 SH3BP1Q9Y3L3 701 aa5.72□□□□□ -1.49
SQLE-202ENST00000518604 FRMPD2Q68DX3 1309 aaPredicted RBP5.72□□□□□ -1.49
SQLE-202ENST00000518604 PRR5-ARHGAP8B1AHC4 643 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 CYP27B1O15528 508 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 STC2O76061 302 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 ZBED1O96006 694 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 KRT18P05783 430 aaKnown RBP5.71□□□□□ -1.5
SQLE-202ENST00000518604 RAP2AP10114 183 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 MTHFD1P11586 935 aaKnown RBP5.71□□□□□ -1.5
SQLE-202ENST00000518604 FPR1P21462 350 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 COMTP21964 271 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 MGAT1P26572 445 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 HTR1BP28222 390 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 GPSM2P81274 684 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 SNAPC2Q13487 334 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 GRM3Q14832 879 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 NFIXQ14938 502 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 ELAVL1Q15717 326 aaKnown RBP5.71□□□□□ -1.5
SQLE-202ENST00000518604 ANO6Q4KMQ2 910 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 CCDC157Q569K6 752 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 DCAF17Q5H9S7 520 aaPredicted RBP5.71□□□□□ -1.5
SQLE-202ENST00000518604 OVCH2Q7RTZ1 564 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 HEATR3Q7Z4Q2 680 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 DAAM2Q86T65 1068 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms