RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 HOXA5P20719 270 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 COMTP21964 271 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 TBX4P57082 545 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 NOGQ13253 232 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 IL10RAQ13651 578 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 ARHGAP29Q52LW3 1261 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 NAIF1Q69YI7 327 aaPredicted RBP3.9□□□□□ -1.79
SKP1-203ENST00000517625 HTR3DQ70Z44 454 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 GPRIN1Q7Z2K8 1008 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 KRTAP19-1Q8IUB9 90 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 GRAMD1CQ8IYS0 662 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 FUKQ8N0W3 1084 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 FAM43AQ8N2R8 423 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 D2HGDHQ8N465 521 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 CAMKK1Q8N5S9 505 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 NLGN4YQ8NFZ3 816 aaPredicted RBP3.9□□□□□ -1.79
SKP1-203ENST00000517625 ZFP28Q8NHY6 868 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 MDM1Q8TC05 714 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 CCHCR1Q8TD31 782 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 FBXO41Q8TF61 875 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 ST8SIA2Q92186 375 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 EDAQ92838 391 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 KAT5Q92993 513 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 TMX3Q96JJ7 454 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 CLPTM1LQ96KA5 538 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 KRTAP4-12Q9BQ66 201 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 EPC1Q9H2F5 836 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 ADAM7Q9H2U9 754 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 RLIMQ9NVW2 624 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 AURKAIP1Q9NWT8 199 aaPredicted RBP3.9□□□□□ -1.79
SKP1-203ENST00000517625 OBP2AQ9NY56 170 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 FEZ2Q9UHY8 353 aaPredicted RBP3.9□□□□□ -1.79
SKP1-203ENST00000517625 HDAC5Q9UQL6 1122 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 PCDHB1Q9Y5F3 818 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 PCDHA13Q9Y5I0 950 aa3.9□□□□□ -1.79
SKP1-203ENST00000517625 A0A0G2JLL6 359 aaPredicted RBP3.89□□□□□ -1.79
SKP1-203ENST00000517625 PRPF3O43395 683 aaKnown RBP3.89□□□□□ -1.79
SKP1-203ENST00000517625 B3GALT2O43825 422 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 PRICKLE3O43900 615 aaPredicted RBP3.89□□□□□ -1.79
SKP1-203ENST00000517625 TUSC2O75896 110 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 UBXN7O94888 489 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 AMHP03971 560 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 MTHFD1P11586 935 aaKnown RBP3.89□□□□□ -1.79
SKP1-203ENST00000517625 ATP5JP18859 108 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 MSX2P35548 267 aaPredicted RBP3.89□□□□□ -1.79
SKP1-203ENST00000517625 GNALP38405 381 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 SELENOPP49908 381 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 CLRN1P58418 232 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 GPSM2P81274 684 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 PURAQ00577 322 aaKnown RBP3.89□□□□□ -1.79
SKP1-203ENST00000517625 CREMQ03060 361 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 FZD5Q13467 585 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 ZNF267Q14586 743 aaPredicted RBP3.89□□□□□ -1.79
SKP1-203ENST00000517625 ELAVL1Q15717 326 aaKnown RBP3.89□□□□□ -1.79
SKP1-203ENST00000517625 BMT2Q1RMZ1 405 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 PABPC1LQ4VXU2 614 aaKnown RBP3.89□□□□□ -1.79
SKP1-203ENST00000517625 FBLN7Q53RD9 439 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 MFSD14BQ5SR56 506 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 AFMIDQ63HM1 303 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 MAMDC4Q6UXC1 1216 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 NOL8Q76FK4 1167 aaKnown RBP3.89□□□□□ -1.79
SKP1-203ENST00000517625 CHST15Q7LFX5 561 aaPredicted RBP3.89□□□□□ -1.79
SKP1-203ENST00000517625 C14orf80Q86SX3 495 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 CEP95Q96GE4 821 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 LRGUKQ96M69 825 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 GNRHR2Q96P88 292 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 C11orf54Q9H0W9 315 aaPredicted RBP3.89□□□□□ -1.79
SKP1-203ENST00000517625 KCNH6Q9H252 994 aa3.89□□□□□ -1.79
SKP1-203ENST00000517625 TBKBP1A7MCY6 615 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 CXorf49A8MYA2 514 aaPredicted RBP3.88□□□□□ -1.79
SKP1-203ENST00000517625 GOLGA6L6A8MZA4 724 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 K7ESM1 405 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 FRS3O43559 492 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 FOXS1O43638 330 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 ZNF623O75123 536 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 ZBED1O96006 694 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 ANXA1P04083 346 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 MALP21145 153 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 SMARCA1P28370 1054 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 PCSK1P29120 753 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 ALDH1A3P47895 512 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 MAP2K6P52564 334 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 AGFG1P52594 562 aaKnown RBP3.88□□□□□ -1.79
SKP1-203ENST00000517625 CACNB3P54284 484 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 FAM193AP78312 1265 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 FOXL1Q12952 345 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 ACAP1Q15027 740 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 ANO6Q4KMQ2 910 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 SLC4A10Q6U841 1118 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 C11orf96Q7Z7L8 435 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 DAAM2Q86T65 1068 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 ZGPATQ8N5A5 531 aaKnown RBP3.88□□□□□ -1.79
SKP1-203ENST00000517625 AOPEPQ8N6M6 819 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 ZBTB34Q8NCN2 500 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 REPS2Q8NFH8 660 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 IL17RDQ8NFM7 739 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 OR52N2Q8NGI0 321 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 DMRTA2Q96SC8 542 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 CGRRF1Q99675 332 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 ACO2Q99798 780 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms