RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 CLIP2Q9UDT6 1046 aa0.42□□□□□ -2.34
SNORA40.17-201ENST00000517256 SUPT16HQ9Y5B9 1047 aaKnown RBP0.42□□□□□ -2.34
SNORA40.17-201ENST00000517256 HS3ST3B1Q9Y662 390 aa0.42□□□□□ -2.34
SNORA40.17-201ENST00000517256 IGKV6-21A0A0C4DH24 114 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 LY6G6EA0A0G2JKS1 128 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 MEIOCA2RUB1 952 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 MPPED1O15442 326 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 CBFA2T2O43439 604 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 ZG16O60844 167 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 SP1P08047 785 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 CLEC2LP0C7M8 214 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 DNAH10OSP0CZ25 163 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 NAT2P11245 290 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 GRK2P25098 689 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 GRK3P35626 688 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 KIR2DL3P43628 341 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 HNRNPA3P51991 378 aaKnown RBP0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 CHN2P52757 468 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 ATP12AP54707 1039 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 WNT3AP56704 352 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 HTRA4P83105 476 aaPredicted RBP0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 SLC7A5Q01650 507 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 ACSM2AQ08AH3 577 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 APOBRQ0VD83 1088 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 SCAPQ12770 1279 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 EIF4EBP2Q13542 120 aaPredicted RBP0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 STILQ15468 1287 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 TAF1CQ15572 869 aaPredicted RBP0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 ZNF239Q16600 458 aaKnown RBP0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 DGKDQ16760 1214 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 ZNF718Q3SXZ3 478 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 FAM76BQ5HYJ3 339 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 KANK2Q63ZY3 851 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 INTS3Q68E01 1043 aaKnown RBP0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 UNC5AQ6ZN44 842 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 HAPLN4Q86UW8 402 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 ANKRD13BQ86YJ7 626 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 CCDC103Q8IW40 242 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 IQCF1Q8N6M8 205 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 BVESQ8NE79 360 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 B4GALNT2Q8NHY0 566 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 ZFP28Q8NHY6 868 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 RCC1LQ96I51 464 aaKnown RBP0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 DYDC2Q96IM9 177 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 TMEM74Q96NL1 305 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 ASB2Q96Q27 587 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 NODALQ96S42 347 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 APBA2Q99767 749 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 NOC4LQ9BVI4 516 aaKnown RBP0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 SF3B5Q9BWJ5 86 aaKnown RBP0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 LSM14BQ9BX40 385 aaKnown RBP0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 SPRY4Q9C004 299 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 KLHL25Q9H0H3 589 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 RNPEPQ9H4A4 650 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 INTS7Q9NVH2 962 aaKnown RBP0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 FAM120CQ9NX05 1096 aaKnown RBP0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 KIAA1522Q9P206 1035 aaPredicted RBP0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 PPARGC1AQ9UBK2 798 aaKnown RBP0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 TELO2Q9Y4R8 837 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 ATP23Q9Y6H3 246 aa0.41□□□□□ -2.34
SNORA40.17-201ENST00000517256 COL4A4P53420 1690 aaPredicted RBP0.4□□□□□ -2.34
SNORA40.17-201ENST00000517256 TMEM129A0AVI4 362 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 TISP43B9A030 160 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 FZD9O00144 591 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 BCAR3O75815 825 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 CPP00450 1065 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 APOHP02749 345 aaPredicted RBP0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 HNRNPLP14866 589 aaKnown RBP eCLIP0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 AOAHP28039 575 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 MLH1P40692 756 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 ERVFC1-1P60608 527 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 HNRNPKP61978 463 aaKnown RBP eCLIP0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 ADAM8P78325 824 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 HSD11B2P80365 405 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 DUSP2Q05923 314 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 BFSP2Q13515 415 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 KEAP1Q14145 624 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 RBM39Q14498 530 aaKnown RBP0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 PRSS53Q2L4Q9 553 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 PRTGQ2VWP7 1150 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 PREPLQ4J6C6 727 aaPredicted RBP0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 PLAC9Q5JTB6 97 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 ZNF484Q5JVG2 852 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 B4GALNT3Q6L9W6 998 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 LBX2Q6XYB7 198 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 TSHZ1Q6ZSZ6 1077 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 DOK3Q7L591 496 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 LMO3Q8TAP4 145 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 NPLOC4Q8TAT6 608 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 BTN2A2Q8WVV5 523 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 PBXIP1Q96AQ6 731 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 FBXO17Q96EF6 278 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 TM9SF2Q99805 663 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 TRIM55Q9BYV6 548 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 TM6SF1Q9BZW5 370 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 ARHGAP39Q9C0H5 1083 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 MYLK2Q9H1R3 596 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 EHMT1Q9H9B1 1298 aa0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 POLR3BQ9NW08 1133 aaPredicted RBP0.4□□□□□ -2.35
SNORA40.17-201ENST00000517256 TFCP2L1Q9NZI6 479 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms