RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 TMEM206Q9H813 350 aa15.92■□□□□ 0.14
SCARNA21-201ENST00000517026 SPG21Q9NZD8 308 aa15.92■□□□□ 0.14
SCARNA21-201ENST00000517026 CACNG4Q9UBN1 327 aa15.92■□□□□ 0.14
SCARNA21-201ENST00000517026 MTCH2Q9Y6C9 303 aa15.92■□□□□ 0.14
SCARNA21-201ENST00000517026 SMIM28A0A1B0GU29 152 aa15.91■□□□□ 0.14
SCARNA21-201ENST00000517026 F8W810 466 aa15.91■□□□□ 0.14
SCARNA21-201ENST00000517026 EIF3DO15371 548 aaKnown RBP eCLIP15.91■□□□□ 0.14
SCARNA21-201ENST00000517026 KINO60870 393 aaKnown RBP15.91■□□□□ 0.14
SCARNA21-201ENST00000517026 CLTAP09496 248 aa15.91■□□□□ 0.14
SCARNA21-201ENST00000517026 CXCL8P10145 99 aa15.91■□□□□ 0.14
SCARNA21-201ENST00000517026 COL9A1P20849 921 aa15.91■□□□□ 0.14
SCARNA21-201ENST00000517026 ALDH7A1P49419 539 aaKnown RBP15.91■□□□□ 0.14
SCARNA21-201ENST00000517026 ACOT2P49753 483 aa15.91■□□□□ 0.14
SCARNA21-201ENST00000517026 GRIK3Q13003 919 aa15.91■□□□□ 0.14
SCARNA21-201ENST00000517026 CAMK1Q14012 370 aa15.91■□□□□ 0.14
SCARNA21-201ENST00000517026 SLFN12LQ6IEE8 588 aa15.91■□□□□ 0.14
SCARNA21-201ENST00000517026 P2RX5Q93086 422 aa15.91■□□□□ 0.14
SCARNA21-201ENST00000517026 CCDC34Q96HJ3 373 aa15.91■□□□□ 0.14
SCARNA21-201ENST00000517026 ZMAT2Q96NC0 199 aaKnown RBP15.91■□□□□ 0.14
SCARNA21-201ENST00000517026 CBWD1Q9BRT8 395 aa15.91■□□□□ 0.14
SCARNA21-201ENST00000517026 PCIF1Q9H4Z3 704 aa15.91■□□□□ 0.14
SCARNA21-201ENST00000517026 AGO2Q9UKV8 859 aaKnown RBP15.91■□□□□ 0.14
SCARNA21-201ENST00000517026 PRG3Q9Y2Y8 225 aaPredicted RBP15.91■□□□□ 0.14
SCARNA21-201ENST00000517026 ZMYM2Q9UBW7 1377 aa15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 NRP1O14786 923 aa15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 TGFB1I1O43294 461 aa15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 RHOBTB3O94955 611 aa15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 ALDH2P05091 517 aa15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 THP07101 528 aa15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 OR1G1P47890 313 aa15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 SPAG1Q07617 926 aa15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 PSMD2Q13200 908 aa15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 NAB2Q15742 525 aa15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 ENOX2Q16206 610 aaKnown RBP15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 BMT2Q1RMZ1 405 aa15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 XKR4Q5GH76 650 aa15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 MICALL1Q8N3F8 863 aa15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 POF1BQ8WVV4 589 aa15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 SAAL1Q96ER3 474 aa15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 PPP1R10Q96QC0 940 aaKnown RBP15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 PAAF1Q9BRP4 392 aa15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 TMEM175Q9BSA9 504 aa15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 TOPORSQ9NS56 1045 aaPredicted RBP15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 LMBRD1Q9NUN5 540 aa15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 CPSF3Q9UKF6 684 aaKnown RBP15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 FAN1Q9Y2M0 1017 aa15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 PCDHA5Q9Y5H7 936 aa15.9■□□□□ 0.14
SCARNA21-201ENST00000517026 MYH11P35749 1972 aa15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 FNDC1Q4ZHG4 1894 aaPredicted RBP15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 GOLGA8IPA6NC78 632 aa15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 CASTOR2A6NHX0 329 aa15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 GOLGA8JA6NMD2 632 aa15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 LACTBL1A8MY62 500 aa15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 PLCB3Q01970 1234 aa15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 KCNB1Q14721 858 aa15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 CCDC85BQ15834 202 aaPredicted RBP15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 KYAT1Q16773 422 aa15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 CRELD2Q6UXH1 353 aaPredicted RBP15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 TMEM130Q8N3G9 435 aa15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 PPM1EQ8WY54 764 aa15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 CCDC47Q96A33 483 aaKnown RBP15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 C18orf25Q96B23 403 aaPredicted RBP15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 MRPL38Q96DV4 380 aaKnown RBP15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 FAM212AQ96EL1 285 aa15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 IGSF21Q96ID5 467 aa15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 GBP4Q96PP9 640 aa15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 FAM213AQ9BRX8 229 aa15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 RPF1Q9H9Y2 349 aaKnown RBP15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 MARCH5Q9NX47 278 aa15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 CNTN3Q9P232 1028 aa15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 MAPK8IP1Q9UQF2 711 aa15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 PCDHGC5Q9Y5F6 944 aa15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 UBE4BO95155 1302 aa15.89■□□□□ 0.13
SCARNA21-201ENST00000517026 TTC26A0AVF1 554 aa15.88■□□□□ 0.13
SCARNA21-201ENST00000517026 CLIC2O15247 247 aa15.88■□□□□ 0.13
SCARNA21-201ENST00000517026 KCNE1P15382 129 aa15.88■□□□□ 0.13
SCARNA21-201ENST00000517026 POU3F3P20264 500 aaPredicted RBP15.88■□□□□ 0.13
SCARNA21-201ENST00000517026 GARTP22102 1010 aa15.88■□□□□ 0.13
SCARNA21-201ENST00000517026 IGFBP6P24592 240 aaPredicted RBP15.88■□□□□ 0.13
SCARNA21-201ENST00000517026 IRS1P35568 1242 aa15.88■□□□□ 0.13
SCARNA21-201ENST00000517026 PPM1AP35813 382 aa15.88■□□□□ 0.13
SCARNA21-201ENST00000517026 SOX4Q06945 474 aaPredicted RBP15.88■□□□□ 0.13
SCARNA21-201ENST00000517026 TUSC3Q13454 348 aa15.88■□□□□ 0.13
SCARNA21-201ENST00000517026 PTPROQ16827 1216 aa15.88■□□□□ 0.13
SCARNA21-201ENST00000517026 KNOP1Q1ED39 458 aaKnown RBP15.88■□□□□ 0.13
SCARNA21-201ENST00000517026 ARMCX5Q6P1M9 558 aa15.88■□□□□ 0.13
SCARNA21-201ENST00000517026 SMYD4Q8IYR2 804 aaPredicted RBP15.88■□□□□ 0.13
SCARNA21-201ENST00000517026 NOC3LQ8WTT2 800 aaKnown RBP15.88■□□□□ 0.13
SCARNA21-201ENST00000517026 VN1R3Q9BXE9 311 aa15.88■□□□□ 0.13
SCARNA21-201ENST00000517026 GOLGA2P5Q9HBQ8 144 aa15.88■□□□□ 0.13
SCARNA21-201ENST00000517026 AGPAT3Q9NRZ7 376 aa15.88■□□□□ 0.13
SCARNA21-201ENST00000517026 RAPGEFL1Q9UHV5 662 aa15.88■□□□□ 0.13
SCARNA21-201ENST00000517026 TULP1O00294 542 aaPredicted RBP15.87■□□□□ 0.13
SCARNA21-201ENST00000517026 SMC2O95347 1197 aa15.87■□□□□ 0.13
SCARNA21-201ENST00000517026 ERVFC1P60507 584 aa15.87■□□□□ 0.13
SCARNA21-201ENST00000517026 KRT17Q04695 432 aa15.87■□□□□ 0.13
SCARNA21-201ENST00000517026 CAMK4Q16566 473 aa15.87■□□□□ 0.13
SCARNA21-201ENST00000517026 ISM2Q6H9L7 571 aa15.87■□□□□ 0.13
SCARNA21-201ENST00000517026 ELOA2Q8IYF1 753 aaPredicted RBP15.87■□□□□ 0.13
SCARNA21-201ENST00000517026 SPATA20Q8TB22 786 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms