RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 CAMKK1Q8N5S9 505 aa0.7□□□□□ -2.3
RNU6-557P-201ENST00000516842 PIK3C3Q8NEB9 887 aa0.7□□□□□ -2.3
RNU6-557P-201ENST00000516842 C16orf52Q8NHV5 167 aa0.7□□□□□ -2.3
RNU6-557P-201ENST00000516842 B4GALNT2Q8NHY0 566 aa0.7□□□□□ -2.3
RNU6-557P-201ENST00000516842 TFAP2CQ92754 450 aa0.7□□□□□ -2.3
RNU6-557P-201ENST00000516842 ANKRD9Q96BM1 317 aaPredicted RBP0.7□□□□□ -2.3
RNU6-557P-201ENST00000516842 C5orf34Q96MH7 638 aa0.7□□□□□ -2.3
RNU6-557P-201ENST00000516842 SPON2Q9BUD6 331 aa0.7□□□□□ -2.3
RNU6-557P-201ENST00000516842 MLXIPQ9HAP2 919 aa0.7□□□□□ -2.3
RNU6-557P-201ENST00000516842 TMEM74BQ9NUR3 256 aa0.7□□□□□ -2.3
RNU6-557P-201ENST00000516842 POLR3BQ9NW08 1133 aaPredicted RBP0.7□□□□□ -2.3
RNU6-557P-201ENST00000516842 SH3BP4Q9P0V3 963 aa0.7□□□□□ -2.3
RNU6-557P-201ENST00000516842 USP25Q9UHP3 1055 aa0.7□□□□□ -2.3
RNU6-557P-201ENST00000516842 ICAM5Q9UMF0 924 aa0.7□□□□□ -2.3
RNU6-557P-201ENST00000516842 ADAMTS5Q9UNA0 930 aa0.7□□□□□ -2.3
RNU6-557P-201ENST00000516842 PCDHB1Q9Y5F3 818 aa0.7□□□□□ -2.3
RNU6-557P-201ENST00000516842 SNED1Q8TER0 1413 aa0.7□□□□□ -2.3
RNU6-557P-201ENST00000516842 A0A1B0GTW7 788 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 TBKBP1A7MCY6 615 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 FOXP2O15409 715 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 ORC4O43929 436 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 DLX3O60479 287 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 BCAR3O75815 825 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 SEC24DO94855 1032 aaPredicted RBP0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 TMEM191BP0C7N4 346 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 GAAP10253 952 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 PYGMP11217 842 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 CYP19A1P11511 503 aaPredicted RBP0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 FGFR4P22455 802 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 VAV2P52735 878 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 RPL36AP83881 106 aaKnown RBP0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 ALDH6A1Q02252 535 aaKnown RBP0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 NFATC4Q14934 902 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 GEN1Q17RS7 908 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 EP400NLQ6ZTU2 488 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 RTN4RL1Q86UN2 441 aaPredicted RBP0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 THNSL2Q86YJ6 484 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 RHOT2Q8IXI1 618 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 ZNF548Q8NEK5 533 aaPredicted RBP0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 REPS2Q8NFH8 660 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 CTCFLQ8NI51 663 aaPredicted RBP0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 FBXO41Q8TF61 875 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 FOXRED1Q96CU9 486 aaPredicted RBP0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 COQ8BQ96D53 544 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 BOD1Q96IK1 185 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 UIMC1Q96RL1 719 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 IER2Q9BTL4 223 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 CATSPERZQ9NTU4 200 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 NCKIPSDQ9NZQ3 722 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 VTI1BQ9UEU0 232 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 TTC3P53804 2025 aa0.69□□□□□ -2.3
RNU6-557P-201ENST00000516842 CCDC151A5D8V7 595 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 FAM83GA6ND36 823 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 VWC2LB2RUY7 222 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 B4DGG1 531 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 ZNF561-AS1K7EIQ3 104 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 MPPED1O15442 326 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 CBFA2T3O75081 653 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 DNAJB5O75953 348 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 CLEC2LP0C7M8 214 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 HOXD9P28356 352 aaPredicted RBP0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 WNT3AP56704 352 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 XPCQ01831 940 aaPredicted RBP0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 SLC6A3Q01959 620 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 TWIST1Q15672 202 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 NTRK3Q16288 839 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 CATSPEREQ5SY80 951 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 ZNF449Q6P9G9 518 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 VWA1Q6PCB0 445 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 CATSPERGQ6ZRH7 1159 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 ASXL2Q76L83 1435 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 FBXO33Q7Z6M2 555 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 SPAG16Q8N0X2 631 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 REPS1Q96D71 796 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 CRBNQ96SW2 442 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 SOX7Q9BT81 388 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 FAM234AQ9H0X4 552 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 POT1Q9NUX5 634 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 DNMT3BQ9UBC3 853 aaKnown RBP0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 USTQ9Y2C2 406 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 ASB1Q9Y576 335 aa0.68□□□□□ -2.3
RNU6-557P-201ENST00000516842 A0A1B0GU03 582 aa0.67□□□□□ -2.3
RNU6-557P-201ENST00000516842 SRRM3A6NNA2 597 aaPredicted RBP0.67□□□□□ -2.3
RNU6-557P-201ENST00000516842 NRP1O14786 923 aa0.67□□□□□ -2.3
RNU6-557P-201ENST00000516842 ADAMTS3O15072 1205 aa0.67□□□□□ -2.3
RNU6-557P-201ENST00000516842 PRSS23O95084 383 aa0.67□□□□□ -2.3
RNU6-557P-201ENST00000516842 GPANK1O95872 356 aa0.67□□□□□ -2.3
RNU6-557P-201ENST00000516842 DRD4P21917 467 aa0.67□□□□□ -2.3
RNU6-557P-201ENST00000516842 MGAT1P26572 445 aa0.67□□□□□ -2.3
RNU6-557P-201ENST00000516842 RRP1P56182 461 aaKnown RBP0.67□□□□□ -2.3
RNU6-557P-201ENST00000516842 GPR85P60893 370 aa0.67□□□□□ -2.3
RNU6-557P-201ENST00000516842 APBA1Q02410 837 aa0.67□□□□□ -2.3
RNU6-557P-201ENST00000516842 MAP4K2Q12851 820 aa0.67□□□□□ -2.3
RNU6-557P-201ENST00000516842 TMEM132BQ14DG7 1078 aa0.67□□□□□ -2.3
RNU6-557P-201ENST00000516842 TXNRD1Q16881 649 aa0.67□□□□□ -2.3
RNU6-557P-201ENST00000516842 ZIK1Q3SY52 487 aaPredicted RBP0.67□□□□□ -2.3
RNU6-557P-201ENST00000516842 EAPPQ56P03 285 aaPredicted RBP0.67□□□□□ -2.3
RNU6-557P-201ENST00000516842 MIS18BP1Q6P0N0 1132 aa0.67□□□□□ -2.3
RNU6-557P-201ENST00000516842 CC2D1AQ6P1N0 951 aaPredicted RBP0.67□□□□□ -2.3
RNU6-557P-201ENST00000516842 LVRNQ6Q4G3 990 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms