RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 PRG3Q9Y2Y8 225 aaPredicted RBP6.57□□□□□ -1.36
SCARNA18.1-201ENST00000516330 TCF20Q9UGU0 1960 aaKnown RBP6.57□□□□□ -1.36
SCARNA18.1-201ENST00000516330 BDP1A6H8Y1 2624 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 PLXNA3P51805 1871 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 TSC2P49815 1807 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 ARHGEF37A1IGU5 675 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 FRMD3A2A2Y4 597 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 SYN3O14994 580 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 PER2O15055 1255 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 KIAA0391O15091 583 aaKnown RBP6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 SLC16A4O15374 487 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 CLDN3O15551 220 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 TRAK2O60296 914 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 LILRB3O75022 631 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 CLASP2O75122 1294 aaKnown RBP6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 KIF4AO95239 1232 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 CXCL14O95715 111 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 KRT18P05783 430 aaKnown RBP6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 GAP43P17677 238 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 CYP3A5P20815 502 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 AKAP5P24588 427 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 CA8P35219 290 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 DDIT3P35638 169 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 LIG4P49917 911 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 AFF1P51825 1210 aaKnown RBP6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 PPP2R3AQ06190 1150 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 KARSQ15046 597 aaKnown RBP6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 STK38Q15208 465 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 ZRSR1Q15695 479 aaKnown RBP6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 LONRF3Q496Y0 759 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 NT5DC1Q5TFE4 455 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 EEF1DP3Q658K8 133 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 SYCE2Q6PIF2 218 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 CCDC149Q6ZUS6 474 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 ANKS3Q6ZW76 656 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 STXBP4Q6ZWJ1 553 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 HAUS6Q7Z4H7 955 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 CDR2LQ86X02 465 aaPredicted RBP6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 NT5DC4Q86YG4 428 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 PLCD3Q8N3E9 789 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 LINC00301Q8NCQ3 95 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 SLC22A17Q8WUG5 538 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 STAMQ92783 540 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 BICD1Q96G01 975 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 FBXL18Q96ME1 805 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 ACAP3Q96P50 834 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 NECAB3Q96P71 396 aaPredicted RBP6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 KLHL5Q96PQ7 755 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 USP28Q96RU2 1077 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 FIZ1Q96SL8 496 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 TTPALQ9BTX7 342 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 TARS2Q9BW92 718 aaKnown RBP6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 VN1R3Q9BXE9 311 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 S1PR5Q9H228 398 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 KCNH6Q9H252 994 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 RNF39Q9H2S5 420 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 SNTG2Q9NY99 539 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 ANKFY1Q9P2R3 1169 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 PCDHGC5Q9Y5F6 944 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 ATP6V1DQ9Y5K8 247 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 VWA8A3KMH1 1905 aa6.56□□□□□ -1.36
SCARNA18.1-201ENST00000516330 UBE4BO95155 1302 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 CASTOR2A6NHX0 329 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 SPDYE4A6NLX3 237 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 TTLL13PA6NNM8 815 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 SPTLC2O15270 562 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 OGTO15294 1046 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 TEX28O15482 410 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 TADA2AO75478 443 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 PPP1R37O75864 691 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 B3GAT3O94766 335 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 F13A1P00488 732 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 ADRB2P07550 413 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 CLTAP09496 248 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 CNPP09543 421 aaKnown RBP6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 HNRNPA1P09651 372 aaKnown RBP eCLIP6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 ZSCAN22P10073 491 aaPredicted RBP6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 LIG1P18858 919 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 KLRC2P26717 231 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 LRPAP1P30533 357 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 RPL9P32969 192 aaKnown RBP6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 STAT6P42226 847 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 GTF2BQ00403 316 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 AMPD3Q01432 767 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 GRIN1Q05586 938 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 UPP1Q16831 310 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 ARSHQ5FYA8 562 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 TMEM31Q5JXX7 168 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 LIN9Q5TKA1 542 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 KIAA0319Q5VV43 1072 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 RRAGBQ5VZM2 374 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 SLFN12LQ6IEE8 588 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 CNNM4Q6P4Q7 775 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 ALKAL1Q6UXT8 129 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 SV2BQ7L1I2 683 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 GPR149Q86SP6 731 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 ZDHHC14Q8IZN3 488 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 CEP120Q8N960 986 aa6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 TDRD5Q8NAT2 981 aaKnown RBP6.55□□□□□ -1.36
SCARNA18.1-201ENST00000516330 TCHPQ9BT92 498 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms