RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 RNASET2O00584 256 aaKnown RBP4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 PJA2O43164 708 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 ENDOD1O94919 500 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 SPATA31D3P0C874 917 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 MYBL2P10244 700 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 KRT4P19013 534 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 SLC6A9P48067 706 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 INHBCP55103 352 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 DPTQ07507 201 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 MGAT2Q10469 447 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 SP140Q13342 867 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 LY6G5CQ5SRR4 150 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 GJC2Q5T442 439 aaPredicted RBP4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 SPATA31D4Q6ZUB0 917 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 NECAB2Q7Z6G3 386 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 PLXDC1Q8IUK5 500 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 CBARPQ8N350 705 aaPredicted RBP4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 NRG4Q8WWG1 115 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 RAB24Q969Q5 203 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 CEP89Q96ST8 783 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 PUS7LQ9H0K6 701 aaKnown RBP4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 SLITRK6Q9H5Y7 841 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 MKS1Q9NXB0 559 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 MOCS1Q9NZB8 636 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 TRHDEQ9UKU6 1024 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 SIK3Q9Y2K2 1263 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 ACTL7AQ9Y615 435 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 PNPLA7Q6ZV29 1317 aa4.36□□□□□ -1.71
SNORA40.12-201ENST00000516329 DRGXA6NNA5 263 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 FAM171A2A8MVW0 826 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 RAMP2O60895 175 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 GPR32O75388 356 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 KATNA1O75449 491 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 IL2RBP14784 551 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 ATP5JP18859 108 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 CDK11BP21127 795 aaKnown RBP4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 SLC6A2P23975 617 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 PCSK1P29120 753 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 GUCY1A2P33402 732 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 GUCY2FP51841 1108 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 EVA1CP58658 441 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 ITKQ08881 620 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 MTMR1Q13613 665 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 PTPAQ15257 358 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 RRP12Q5JTH9 1297 aaKnown RBP4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 FAM102AQ5T9C2 384 aaPredicted RBP4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 LAIR1Q6GTX8 287 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 ZNF529Q6P280 563 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 MED25Q71SY5 747 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 CPEB3Q8NE35 698 aaKnown RBP4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 C1orf162Q8NEQ5 155 aaPredicted RBP4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 MYEOVQ96EZ4 313 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 PRRX2Q99811 253 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 MYOCQ99972 504 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 MENTQ9BUN1 341 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 CCDC8Q9H0W5 538 aaPredicted RBP4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 ZNF277Q9NRM2 450 aaPredicted RBP4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 TMEM140Q9NV12 185 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 INTUQ9ULD6 942 aa4.35□□□□□ -1.71
SNORA40.12-201ENST00000516329 TRIM75PA6NK02 468 aa4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 DIRC3C9JPN6 131 aa4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 XPOTO43592 962 aaKnown RBP4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 NDUFS2O75306 463 aa4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 PPFIA4O75335 1185 aa4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 AMPD3Q01432 767 aa4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 BEAN1Q3B7T3 259 aa4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 SYDE2Q5VT97 1194 aa4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 TSHZ3Q63HK5 1081 aa4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 METRNLQ641Q3 311 aa4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 UBE3BQ7Z3V4 1068 aa4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 RHOT1Q8IXI2 618 aa4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 DRC7Q8IY82 874 aa4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 ULK2Q8IYT8 1036 aa4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 ZGPATQ8N5A5 531 aaKnown RBP4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 OR56A1Q8NGH5 318 aa4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 JADE3Q92613 823 aa4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 C7orf25Q9BPX7 421 aa4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 ZSWIM1Q9BR11 485 aa4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 FBXO34Q9NWN3 711 aa4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 TUBD1Q9UJT1 453 aa4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 HS3ST4Q9Y661 456 aa4.34□□□□□ -1.71
SNORA40.12-201ENST00000516329 CADPSQ9ULU8 1353 aa4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 TMEM191CA6NGB0 347 aa4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 FOXN1O15353 648 aa4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 POMCP01189 267 aa4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 AMY1AP04745 511 aa4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 C5AR1P21730 350 aa4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 DDX6P26196 483 aaKnown RBP eCLIP4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 MTM1Q13496 603 aa4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 PCBP2Q15366 365 aaKnown RBP eCLIP4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 INAVAQ3KP66 663 aa4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 AGAP9Q5VTM2 703 aa4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 RHOT2Q8IXI1 618 aa4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 PRPF38AQ8NAV1 312 aaKnown RBP4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 FUBP3Q96I24 572 aaKnown RBP eCLIP4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 AGAP2Q99490 1192 aa4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 SMAD5Q99717 465 aaKnown RBP4.33□□□□□ -1.72
SNORA40.12-201ENST00000516329 WDR11Q9BZH6 1224 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms