RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 SESTD1Q86VW0 696 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CDR2LQ86X02 465 aaPredicted RBP8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 WDR49Q8IV35 697 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 REXO1L1PQ8IX06 675 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ACRBPQ8NEB7 543 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TAS1R2Q8TE23 839 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 FAM212AQ96EL1 285 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CPB2Q96IY4 423 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 NT5C1BQ96P26 610 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 EIF3CQ99613 913 aaKnown RBP8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 OSMRQ99650 979 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 STK33Q9BYT3 514 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 RPF1Q9H9Y2 349 aaKnown RBP8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 UBE2TQ9NPD8 197 aaPredicted RBP8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 RAB20Q9NX57 234 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 AJAP1Q9UKB5 411 aaPredicted RBP8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TRIM17Q9Y577 477 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PTCH2Q9Y6C5 1203 aa8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 BZW2Q9Y6E2 419 aaKnown RBP8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PDCD11Q14690 1871 aaKnown RBP8.26□□□□□ -1.09
SCARNA20.1-201ENST00000516009 A0A1B0GUA9 196 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 F8VZ95 297 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 M0QZ92 97 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ZC3H11AO75152 810 aaKnown RBP eCLIP8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PHACTR2O75167 634 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 OFD1O75665 1012 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CABYRO75952 493 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 IL18RAPO95256 599 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 HLA-DRAP01903 254 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 C4BPAP04003 597 aaKnown RBP8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TUBB4AP04350 444 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PLEKP08567 350 aaPredicted RBP8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CCDC172P0C7W6 258 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 STAG3L1P0CL83 205 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TNNT1P13805 278 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 FGFR4P22455 802 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PRKCIP41743 596 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PIK3CAP42336 1068 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 KIF11P52732 1056 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CRYBB1P53674 252 aaPredicted RBP8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 WNT7BP56706 349 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 OSTNP61366 133 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 MRPS6P82932 125 aaKnown RBP8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 POU5F1Q01860 360 aaKnown RBP8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 KLHL30Q0D2K2 578 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 MAPK8IP2Q13387 824 aaPredicted RBP8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 DRAP1Q14919 205 aaPredicted RBP8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 SNX17Q15036 470 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ENOX2Q16206 610 aaKnown RBP8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ZACNQ401N2 412 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ARHGAP29Q52LW3 1261 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 WDR44Q5JSH3 913 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 HGSNATQ68CP4 663 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 LMBRD2Q68DH5 695 aaPredicted RBP8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CCSAPQ6IQ19 270 aaPredicted RBP8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 GDF6Q6KF10 455 aaPredicted RBP8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 NOTUMQ6P988 496 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 IRF2BP2Q7Z5L9 587 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 KIAA1328Q86T90 577 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 GPIHBP1Q8IV16 184 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ARHGEF19Q8IW93 802 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PPM1KQ8N3J5 372 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CEP120Q8N960 986 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ZNF516Q92618 1163 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 SEMA4DQ92854 862 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 FAM81BQ96LP2 452 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CDHR5Q9HBB8 845 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 C1orf112Q9NSG2 853 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TSKSQ9UJT2 592 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PTPRJQ12913 1337 aa8.25□□□□□ -1.09
SCARNA20.1-201ENST00000516009 MOXD2PA6NHM9 499 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 EVI5O60447 810 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 B4GALT4O60513 344 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 LRRN2O75325 713 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 GFPT2O94808 682 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CLSTN1O94985 981 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 LCA5LO95447 670 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TNNC2P02585 160 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TMEM191BP0C7N4 346 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 CXCL8P10145 99 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ANXA13P27216 316 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 AXLP30530 894 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ACLYP53396 1101 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 MFAP3P55082 362 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TFAMQ00059 246 aaKnown RBP8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 PTPN11Q06124 597 aaPredicted RBP8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 DUOXA2Q1HG44 320 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TDRD10Q5VZ19 366 aaKnown RBP8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 SLC27A1Q6PCB7 646 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ENOSF1Q7L5Y1 443 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 SERINC5Q86VE9 423 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 VPS36Q86VN1 386 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TXLNBQ8N3L3 684 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ARRDC4Q8NCT1 418 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 OR5B17Q8NGF7 314 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 FAM84AQ96KN4 292 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 GLT1D1Q96MS3 346 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 ACAP3Q96P50 834 aa8.24□□□□□ -1.09
SCARNA20.1-201ENST00000516009 TSEN34Q9BSV6 310 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms