RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 RPF1Q9H9Y2 349 aaKnown RBP10.59□□□□□ -0.71
SCARNA16-201ENST00000515981 UBN1Q9NPG3 1134 aa10.59□□□□□ -0.71
SCARNA16-201ENST00000515981 HSPBP1Q9NZL4 362 aa10.59□□□□□ -0.71
SCARNA16-201ENST00000515981 CPSF3Q9UKF6 684 aaKnown RBP10.59□□□□□ -0.71
SCARNA16-201ENST00000515981 UBE4BO95155 1302 aa10.58□□□□□ -0.71
SCARNA16-201ENST00000515981 CITO14578 2027 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 CASTOR2A6NHX0 329 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 INPPL1O15357 1258 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 EXTL3O43909 919 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 ZC3H11AO75152 810 aaKnown RBP eCLIP10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 CSPG5O95196 566 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 MBD3O95983 291 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 GALTP07902 379 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 CTNNB1P35222 781 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 SLC11A1P49279 550 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 CASP4P49662 377 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 PMS1P54277 932 aaKnown RBP10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 BCAR1P56945 870 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 SOX4Q06945 474 aaPredicted RBP10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 NAB2Q15742 525 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 XKR4Q5GH76 650 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 SCARA3Q6AZY7 606 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 KCNT2Q6UVM3 1135 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 HS2ST1Q7LGA3 356 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 ADSSL1Q8N142 457 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 LRRC43Q8N309 656 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 GUF1Q8N442 669 aaKnown RBP10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 KLHL23Q8NBE8 558 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 COLGALT1Q8NBJ5 622 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 BCL7CQ8WUZ0 217 aaPredicted RBP10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 CLP1Q92989 425 aaKnown RBP10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 FAM193BQ96PV7 902 aaPredicted RBP10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 RPS6KC1Q96S38 1066 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 PAAF1Q9BRP4 392 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 PRDM12Q9H4Q4 367 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 GOLGA2P5Q9HBQ8 144 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 TMEM63CQ9P1W3 806 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 KANSL3Q9P2N6 904 aa10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 PRG3Q9Y2Y8 225 aaPredicted RBP10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 PRRC2BQ5JSZ5 2229 aaKnown RBP10.58□□□□□ -0.72
SCARNA16-201ENST00000515981 TTC26A0AVF1 554 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 TRIM49BA6NDI0 452 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 PDXKO00764 312 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 NR3C1P04150 777 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 THP07101 528 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 ADRB2P07550 413 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 OR1G1P47890 313 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 STX17P56962 302 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 GPM6BQ13491 265 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 ZNF697Q5TEC3 545 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 ANKRD40Q6AI12 368 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 JADE1Q6IE81 842 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 CAVIN1Q6NZI2 390 aaKnown RBP10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 TMEM173Q86WV6 379 aaPredicted RBP10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 COLGALT2Q8IYK4 626 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 GPD1LQ8N335 351 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 DEFB123Q8N688 67 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 FBXO22Q8NEZ5 403 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 GDPD5Q8WTR4 605 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 KIF12Q96FN5 646 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 PPP1R10Q96QC0 940 aaKnown RBP10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 MRPL9Q9BYD2 267 aaKnown RBP10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 PDE11AQ9HCR9 933 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 ALG13Q9NP73 1137 aaKnown RBP10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 DMAC2Q9NW81 257 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 TUBGCP4Q9UGJ1 667 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 TRANK1O15050 2925 aa10.57□□□□□ -0.72
SCARNA16-201ENST00000515981 KIAA1671Q9BY89 1806 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 ZNF233A6NK53 670 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 NRP1O14786 923 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 GRM6O15303 877 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 CALUO43852 315 aaPredicted RBP10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 EXOC3O60645 756 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 ALDH2P05091 517 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 ITGB1P05556 798 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 NFICP08651 508 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 KCNE1P15382 129 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 LAG3P18627 525 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 DNAJB1P25685 340 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 DSC1Q08554 894 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 GRIK3Q13003 919 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 ADGRE1Q14246 886 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 KYAT1Q16773 422 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 ZCWPW2Q504Y3 356 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 CCDC183Q5T5S1 534 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 LMBRD2Q68DH5 695 aaPredicted RBP10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 CENPPQ6IPU0 288 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 BRSK2Q8IWQ3 736 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 XXYLT1Q8NBI6 393 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 GOLGA5Q8TBA6 731 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 SPPL3Q8TCT6 385 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 PLEKHO2Q8TD55 490 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 NELFBQ8WX92 580 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 P2RX5Q93086 422 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 ZNF558Q96NG5 402 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 POP1Q99575 1024 aaKnown RBP10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 PLEKHA5Q9HAU0 1116 aa10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 TOPORSQ9NS56 1045 aaPredicted RBP10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 RBAKQ9NYW8 714 aaPredicted RBP10.56□□□□□ -0.72
SCARNA16-201ENST00000515981 CNTN3Q9P232 1028 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms