RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 R3HDMLQ9H3Y0 253 aa4.4□□□□□ -1.71
HERC4-215ENST00000515753 GREM2Q9H772 168 aa4.4□□□□□ -1.71
HERC4-215ENST00000515753 PCDH12Q9NPG4 1184 aa4.4□□□□□ -1.71
HERC4-215ENST00000515753 AKIP1Q9NQ31 210 aa4.4□□□□□ -1.71
HERC4-215ENST00000515753 COL4A3BPQ9Y5P4 624 aa4.4□□□□□ -1.71
HERC4-215ENST00000515753 UNC119BA6NIH7 251 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 PRAMEF4O60810 478 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 PLA2G5P39877 138 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 WASP42768 502 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 ATXN1P54253 815 aaKnown RBP4.39□□□□□ -1.71
HERC4-215ENST00000515753 RNASE9P60153 205 aaKnown RBP4.39□□□□□ -1.71
HERC4-215ENST00000515753 SRSF2Q01130 221 aaKnown RBP4.39□□□□□ -1.71
HERC4-215ENST00000515753 MGAT2Q10469 447 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 TOR2AQ5JU69 321 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 COLEC12Q5KU26 742 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 SYDE2Q5VT97 1194 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 ABHD15Q6UXT9 468 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 GPRIN1Q7Z2K8 1008 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 RD3Q7Z3Z2 195 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 GDF7Q7Z4P5 450 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 GLCCI1Q86VQ1 547 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 PRPF38AQ8NAV1 312 aaKnown RBP4.39□□□□□ -1.71
HERC4-215ENST00000515753 GPR156Q8NFN8 814 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 ACE2Q9BYF1 805 aaPredicted RBP4.39□□□□□ -1.71
HERC4-215ENST00000515753 RSAD1Q9HA92 442 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 BCO1Q9HAY6 547 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 SPON1Q9HCB6 807 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 DNAJC28Q9NX36 388 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 GPRC5DQ9NZD1 345 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 EDARQ9UNE0 448 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 CLCA2Q9UQC9 943 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 GPR45Q9Y5Y3 372 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 SPATA31A6Q5VVP1 1343 aa4.39□□□□□ -1.71
HERC4-215ENST00000515753 COL11A2P13942 1736 aaPredicted RBP4.38□□□□□ -1.71
HERC4-215ENST00000515753 TMEM200CA6NKL6 621 aa4.38□□□□□ -1.71
HERC4-215ENST00000515753 B5MCH6 92 aa4.38□□□□□ -1.71
HERC4-215ENST00000515753 FZD9O00144 591 aa4.38□□□□□ -1.71
HERC4-215ENST00000515753 RNASET2O00584 256 aaKnown RBP4.38□□□□□ -1.71
HERC4-215ENST00000515753 ITGA10O75578 1167 aa4.38□□□□□ -1.71
HERC4-215ENST00000515753 RBP3P10745 1247 aa4.38□□□□□ -1.71
HERC4-215ENST00000515753 CD38P28907 300 aa4.38□□□□□ -1.71
HERC4-215ENST00000515753 MCAMP43121 646 aa4.38□□□□□ -1.71
HERC4-215ENST00000515753 MTMR1Q13613 665 aa4.38□□□□□ -1.71
HERC4-215ENST00000515753 MUM1L1Q5H9M0 696 aa4.38□□□□□ -1.71
HERC4-215ENST00000515753 FAM180AQ6UWF9 173 aa4.38□□□□□ -1.71
HERC4-215ENST00000515753 PDZD4Q76G19 769 aaPredicted RBP4.38□□□□□ -1.71
HERC4-215ENST00000515753 ANKRD13AQ8IZ07 590 aa4.38□□□□□ -1.71
HERC4-215ENST00000515753 C1orf162Q8NEQ5 155 aaPredicted RBP4.38□□□□□ -1.71
HERC4-215ENST00000515753 TGFBRAP1Q8WUH2 860 aa4.38□□□□□ -1.71
HERC4-215ENST00000515753 CAVIN3Q969G5 261 aa4.38□□□□□ -1.71
HERC4-215ENST00000515753 RBM12Q9NTZ6 932 aaKnown RBP4.38□□□□□ -1.71
HERC4-215ENST00000515753 EPN1Q9Y6I3 576 aaPredicted RBP4.38□□□□□ -1.71
HERC4-215ENST00000515753 FAM171A2A8MVW0 826 aa4.37□□□□□ -1.71
HERC4-215ENST00000515753 ZNF185O15231 689 aa4.37□□□□□ -1.71
HERC4-215ENST00000515753 PJA2O43164 708 aa4.37□□□□□ -1.71
HERC4-215ENST00000515753 ENDOD1O94919 500 aa4.37□□□□□ -1.71
HERC4-215ENST00000515753 FLT3LGP49771 235 aa4.37□□□□□ -1.71
HERC4-215ENST00000515753 GUCY2FP51841 1108 aa4.37□□□□□ -1.71
HERC4-215ENST00000515753 CDK17Q00537 523 aa4.37□□□□□ -1.71
HERC4-215ENST00000515753 NHLH2Q02577 135 aa4.37□□□□□ -1.71
HERC4-215ENST00000515753 TAP1Q03518 808 aa4.37□□□□□ -1.71
HERC4-215ENST00000515753 PPP3CAQ08209 521 aa4.37□□□□□ -1.71
HERC4-215ENST00000515753 PTPROQ16827 1216 aa4.37□□□□□ -1.71
HERC4-215ENST00000515753 FBXO42Q6P3S6 717 aa4.37□□□□□ -1.71
HERC4-215ENST00000515753 DRICH1Q6PGQ1 229 aaPredicted RBP4.37□□□□□ -1.71
HERC4-215ENST00000515753 ZNF572Q7Z3I7 529 aaPredicted RBP4.37□□□□□ -1.71
HERC4-215ENST00000515753 SYT12Q8IV01 421 aa4.37□□□□□ -1.71
HERC4-215ENST00000515753 ARHGEF19Q8IW93 802 aa4.37□□□□□ -1.71
HERC4-215ENST00000515753 AMOTL1Q8IY63 956 aa4.37□□□□□ -1.71
HERC4-215ENST00000515753 TRMT2AQ8IZ69 625 aaKnown RBP4.37□□□□□ -1.71
HERC4-215ENST00000515753 OR7D4Q8NG98 312 aa4.37□□□□□ -1.71
HERC4-215ENST00000515753 RIN2Q8WYP3 895 aaPredicted RBP4.37□□□□□ -1.71
HERC4-215ENST00000515753 SLC13A1Q9BZW2 595 aa4.37□□□□□ -1.71
HERC4-215ENST00000515753 SYBUQ9NX95 663 aa4.37□□□□□ -1.71
HERC4-215ENST00000515753 TRHDEQ9UKU6 1024 aa4.37□□□□□ -1.71
HERC4-215ENST00000515753 CHST2Q9Y4C5 530 aa4.37□□□□□ -1.71
HERC4-215ENST00000515753 ARHGEF17Q96PE2 2063 aaPredicted RBP4.36□□□□□ -1.71
HERC4-215ENST00000515753 ANKRD62A6NC57 917 aa4.36□□□□□ -1.71
HERC4-215ENST00000515753 PRR5-ARHGAP8B1AHC4 643 aa4.36□□□□□ -1.71
HERC4-215ENST00000515753 GABRDO14764 452 aa4.36□□□□□ -1.71
HERC4-215ENST00000515753 ECHS1P30084 290 aa4.36□□□□□ -1.71
HERC4-215ENST00000515753 GUCY1A2P33402 732 aa4.36□□□□□ -1.71
HERC4-215ENST00000515753 FOXI1Q12951 378 aa4.36□□□□□ -1.71
HERC4-215ENST00000515753 SP140Q13342 867 aa4.36□□□□□ -1.71
HERC4-215ENST00000515753 BEAN1Q3B7T3 259 aa4.36□□□□□ -1.71
HERC4-215ENST00000515753 ANKS6Q68DC2 871 aa4.36□□□□□ -1.71
HERC4-215ENST00000515753 Q6ZVL8 140 aa4.36□□□□□ -1.71
HERC4-215ENST00000515753 CPEB3Q8NE35 698 aaKnown RBP4.36□□□□□ -1.71
HERC4-215ENST00000515753 CASKIN2Q8WXE0 1202 aa4.36□□□□□ -1.71
HERC4-215ENST00000515753 DCLRE1CQ96SD1 692 aaKnown RBP4.36□□□□□ -1.71
HERC4-215ENST00000515753 CDC5LQ99459 802 aaKnown RBP4.36□□□□□ -1.71
HERC4-215ENST00000515753 TYW1Q9NV66 732 aaKnown RBP4.36□□□□□ -1.71
HERC4-215ENST00000515753 MAP3K2Q9Y2U5 619 aa4.36□□□□□ -1.71
HERC4-215ENST00000515753 SPEF1Q9Y4P9 236 aa4.36□□□□□ -1.71
HERC4-215ENST00000515753 COX11Q9Y6N1 276 aa4.36□□□□□ -1.71
HERC4-215ENST00000515753 ZMYM3Q14202 1370 aa4.36□□□□□ -1.71
HERC4-215ENST00000515753 SHTN1A0MZ66 631 aa4.35□□□□□ -1.71
HERC4-215ENST00000515753 ZSCAN20P17040 1043 aaPredicted RBP4.35□□□□□ -1.71
HERC4-215ENST00000515753 TYRP1P17643 537 aa4.35□□□□□ -1.71
HERC4-215ENST00000515753 SREBF1P36956 1147 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms