RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 BSNDQ8WZ55 320 aa13.46□□□□□ -0.25
SDHA-216ENST00000514027 POMGNT1Q8WZA1 660 aa13.46□□□□□ -0.25
SDHA-216ENST00000514027 ZNF653Q96CK0 615 aa13.46□□□□□ -0.25
SDHA-216ENST00000514027 BICD1Q96G01 975 aa13.46□□□□□ -0.25
SDHA-216ENST00000514027 CAMKK2Q96RR4 588 aa13.46□□□□□ -0.25
SDHA-216ENST00000514027 ZSWIM1Q9BR11 485 aa13.46□□□□□ -0.25
SDHA-216ENST00000514027 ST6GALNAC4Q9H4F1 302 aa13.46□□□□□ -0.25
SDHA-216ENST00000514027 ACTR5Q9H9F9 607 aaPredicted RBP13.46□□□□□ -0.25
SDHA-216ENST00000514027 RIPK3Q9Y572 518 aa13.46□□□□□ -0.25
SDHA-216ENST00000514027 NFS1Q9Y697 457 aa13.46□□□□□ -0.25
SDHA-216ENST00000514027 MIF4GDA9UHW6 222 aaKnown RBP13.45□□□□□ -0.26
SDHA-216ENST00000514027 VWA5AO00534 786 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 SPOPO43791 374 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 PDE6CP51160 858 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 GHRHRQ02643 423 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 IFFO1Q0D2I5 559 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 CPNE8Q86YQ8 564 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 JAMLQ86YT9 394 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 MAP4K3Q8IVH8 894 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 FAM71AQ8IYT1 594 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 ZNF564Q8TBZ8 553 aaPredicted RBP13.45□□□□□ -0.26
SDHA-216ENST00000514027 ATP8B4Q8TF62 1192 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 DHX38Q92620 1227 aaKnown RBP13.45□□□□□ -0.26
SDHA-216ENST00000514027 FAM84AQ96KN4 292 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 NUP85Q9BW27 656 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 GGA2Q9UJY4 613 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 HNRNPDLO14979 420 aaKnown RBP13.45□□□□□ -0.26
SDHA-216ENST00000514027 MAPK13O15264 365 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 CTNND1O60716 968 aaKnown RBP13.45□□□□□ -0.26
SDHA-216ENST00000514027 CALCAP01258 141 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 KRT5P13647 590 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 CCND2P30279 289 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 PLTPP55058 493 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 FMO1Q01740 532 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 KRT71Q3SY84 523 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 RUFY4Q6ZNE9 571 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 TRIM74Q86UV6 250 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 TRIM73Q86UV7 250 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 TAS1R2Q8TE23 839 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 SEC14L1Q92503 715 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 CCDC114Q96M63 670 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 NT5C1BQ96P26 610 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 ERP44Q9BS26 406 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 MOV10L1Q9BXT6 1211 aaKnown RBP13.45□□□□□ -0.26
SDHA-216ENST00000514027 ANKEF1Q9NU02 776 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 MAP3K20Q9NYL2 800 aaKnown RBP13.45□□□□□ -0.26
SDHA-216ENST00000514027 SEPT9Q9UHD8 586 aaPredicted RBP13.45□□□□□ -0.26
SDHA-216ENST00000514027 RASAL2Q9UJF2 1139 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 SNX24Q9Y343 169 aa13.45□□□□□ -0.26
SDHA-216ENST00000514027 CYP11B1P15538 503 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 MDH1P40925 334 aaKnown RBP13.44□□□□□ -0.26
SDHA-216ENST00000514027 SEC24CP53992 1094 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 HADHBP55084 474 aaKnown RBP13.44□□□□□ -0.26
SDHA-216ENST00000514027 SNRPFP62306 86 aaKnown RBP13.44□□□□□ -0.26
SDHA-216ENST00000514027 MTA1Q13330 715 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 LLGL1Q15334 1064 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 SNRNP48Q6IEG0 339 aaKnown RBP13.44□□□□□ -0.26
SDHA-216ENST00000514027 CAPRIN2Q6IMN6 1127 aaKnown RBP13.44□□□□□ -0.26
SDHA-216ENST00000514027 SAMD7Q7Z3H4 446 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 PIAS4Q8N2W9 510 aaPredicted RBP13.44□□□□□ -0.26
SDHA-216ENST00000514027 SLC17A8Q8NDX2 589 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 FBXL13Q8NEE6 735 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 ZNF473Q8WTR7 871 aaKnown RBP13.44□□□□□ -0.26
SDHA-216ENST00000514027 TCP11Q8WWU5 503 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 SHC3Q92529 594 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 MAGOHBQ96A72 148 aaKnown RBP13.44□□□□□ -0.26
SDHA-216ENST00000514027 PI4K2AQ9BTU6 479 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 EPN3Q9H201 632 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 TMEM8AQ9HCN3 771 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 FZD1Q9UP38 647 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 TRPC6Q9Y210 931 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 PCDHA10Q9Y5I2 948 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 E7EVH7 732 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 PHF2O75151 1096 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 NR3C2P08235 984 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 NEFHP12036 1026 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 DHX34Q14147 1143 aaKnown RBP13.44□□□□□ -0.26
SDHA-216ENST00000514027 CLUL1Q15846 466 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 PPP2R5EQ16537 467 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 PTGISQ16647 500 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 ARMC3Q5W041 872 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 DUPD1Q68J44 220 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 SLC39A4Q6P5W5 647 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 BZW1Q7L1Q6 419 aaKnown RBP13.44□□□□□ -0.26
SDHA-216ENST00000514027 OTUD6AQ7L8S5 288 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 TMEM174Q8WUU8 243 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 FAM213AQ9BRX8 229 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 PPANQ9NQ55 473 aaKnown RBP13.44□□□□□ -0.26
SDHA-216ENST00000514027 RAB20Q9NX57 234 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 NOVA2Q9UNW9 492 aaKnown RBP13.44□□□□□ -0.26
SDHA-216ENST00000514027 PTPN22Q9Y2R2 807 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 TELO2Q9Y4R8 837 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 DOCK5Q9H7D0 1870 aa13.44□□□□□ -0.26
SDHA-216ENST00000514027 ADGRA3Q8IWK6 1321 aa13.43□□□□□ -0.26
SDHA-216ENST00000514027 FAM187AA6NFU0 413 aa13.43□□□□□ -0.26
SDHA-216ENST00000514027 ZNF862O60290 1169 aa13.43□□□□□ -0.26
SDHA-216ENST00000514027 ACCSLQ4AC99 568 aa13.43□□□□□ -0.26
SDHA-216ENST00000514027 NBPF12Q5TAG4 269 aaPredicted RBP13.43□□□□□ -0.26
SDHA-216ENST00000514027 LMBRD2Q68DH5 695 aaPredicted RBP13.43□□□□□ -0.26
SDHA-216ENST00000514027 SWSAP1Q6NVH7 229 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms