RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 HTRA4P83105 476 aaPredicted RBP12.33□□□□□ -0.44
HTT-213ENST00000513806 PAK1Q13153 545 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 STIM1Q13586 685 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 BTG3Q14201 252 aaPredicted RBP12.33□□□□□ -0.44
HTT-213ENST00000513806 SKOR2Q2VWA4 1001 aaPredicted RBP12.33□□□□□ -0.44
HTT-213ENST00000513806 HSP90AA4PQ58FG1 418 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 NOMO2Q5JPE7 1267 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 TTI2Q6NXR4 508 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 GLB1LQ6UWU2 654 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 ABI1Q8IZP0 508 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 XXYLT1Q8NBI6 393 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 PHOSPHO2Q8TCD6 241 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 DHTKD1Q96HY7 919 aaPredicted RBP12.33□□□□□ -0.44
HTT-213ENST00000513806 POP1Q99575 1024 aaKnown RBP12.33□□□□□ -0.44
HTT-213ENST00000513806 FUCA2Q9BTY2 467 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 RPF1Q9H9Y2 349 aaKnown RBP12.33□□□□□ -0.44
HTT-213ENST00000513806 PDE11AQ9HCR9 933 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 TOPORSQ9NS56 1045 aaPredicted RBP12.33□□□□□ -0.44
HTT-213ENST00000513806 TBC1D13Q9NVG8 400 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 DMAC2Q9NW81 257 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 TUBGCP4Q9UGJ1 667 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 MTUS1Q9ULD2 1270 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 TRAF3IP3Q9Y228 551 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 PTPRJQ12913 1337 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 CHD7Q9P2D1 2997 aa12.33□□□□□ -0.44
HTT-213ENST00000513806 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.32□□□□□ -0.44
HTT-213ENST00000513806 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.32□□□□□ -0.44
HTT-213ENST00000513806 TTC26A0AVF1 554 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 NT5C1B-RDH14C9J2C7 533 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 PSMA7O14818 248 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 AKAP3O75969 853 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 CSPG5O95196 566 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 CLTAP09496 248 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 YARSP54577 528 aaKnown RBP12.32□□□□□ -0.44
HTT-213ENST00000513806 SOX4Q06945 474 aaPredicted RBP12.32□□□□□ -0.44
HTT-213ENST00000513806 ADAM9Q13443 819 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 SNRNP35Q16560 246 aaKnown RBP12.32□□□□□ -0.44
HTT-213ENST00000513806 STX1AQ16623 288 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 ANO6Q4KMQ2 910 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 SPOUT1Q5T280 376 aaKnown RBP12.32□□□□□ -0.44
HTT-213ENST00000513806 JADE1Q6IE81 842 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 ALKAL1Q6UXT8 129 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 APBB1IPQ7Z5R6 666 aaPredicted RBP12.32□□□□□ -0.44
HTT-213ENST00000513806 BRSK2Q8IWQ3 736 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 C12orf56Q8IXR9 622 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 EFCAB13Q8IY85 973 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 HACE1Q8IYU2 909 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 LRCH3Q96II8 777 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 RPS6KC1Q96S38 1066 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 RAD9AQ99638 391 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 TSG101Q99816 390 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 PAAF1Q9BRP4 392 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 C17orf80Q9BSJ5 609 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 TMEM117Q9H0C3 514 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 CWH43Q9H720 699 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 NRDE2Q9H7Z3 1164 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 RBAKQ9NYW8 714 aaPredicted RBP12.32□□□□□ -0.44
HTT-213ENST00000513806 GIT1Q9Y2X7 761 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 INSL6Q9Y581 213 aa12.32□□□□□ -0.44
HTT-213ENST00000513806 VWA8A3KMH1 1905 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 SMIM28A0A1B0GU29 152 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 LINC01553A4QN01 128 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 CASTOR2A6NHX0 329 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 ZC3H11AO75152 810 aaKnown RBP eCLIP12.31□□□□□ -0.44
HTT-213ENST00000513806 KIF20AO95235 890 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 LINC00271P0C7V0 271 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 DNAJB2P25686 324 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 DLG4P78352 724 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 RNASELQ05823 741 aaKnown RBP12.31□□□□□ -0.44
HTT-213ENST00000513806 PPP2R3AQ06190 1150 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 CYP24A1Q07973 514 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 NAB2Q15742 525 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 CMTR2Q8IYT2 770 aaKnown RBP12.31□□□□□ -0.44
HTT-213ENST00000513806 MLKLQ8NB16 471 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 GOLGA5Q8TBA6 731 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 URGCPQ8TCY9 931 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 ELMO3Q96BJ8 720 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 CCDC127Q96BQ5 260 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 KIF12Q96FN5 646 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 FBXL18Q96ME1 805 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 SRRTQ9BXP5 876 aaKnown RBP12.31□□□□□ -0.44
HTT-213ENST00000513806 MMRN2Q9H8L6 949 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 ANO10Q9NW15 660 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 CNTN3Q9P232 1028 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 PCDHA11Q9Y5I1 949 aa12.31□□□□□ -0.44
HTT-213ENST00000513806 EPOPA6NHQ4 379 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 ZNF233A6NK53 670 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 RFXAPO00287 272 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 PPEF2O14830 753 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 HOXA2O43364 376 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 LDHAP00338 332 aaKnown RBP12.3□□□□□ -0.44
HTT-213ENST00000513806 TRIM49P0CI25 452 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 TRIM49CP0CI26 452 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 DLATP10515 647 aaKnown RBP12.3□□□□□ -0.44
HTT-213ENST00000513806 SLC11A1P49279 550 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 TAP1Q03518 808 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 EDRF1Q3B7T1 1238 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 XKR4Q5GH76 650 aa12.3□□□□□ -0.44
HTT-213ENST00000513806 TMEM173Q86WV6 379 aaPredicted RBP12.3□□□□□ -0.44
HTT-213ENST00000513806 CREBRFQ8IUR6 639 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms