RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 XPNPEP1Q9NQW7 623 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 KLK14Q9P0G3 267 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 DDX25Q9UHL0 483 aaKnown RBP12.17□□□□□ -0.46
DDX41-216ENST00000513562 RALYQ9UKM9 306 aaKnown RBP12.17□□□□□ -0.46
DDX41-216ENST00000513562 NDRG2Q9UN36 371 aaKnown RBP12.17□□□□□ -0.46
DDX41-216ENST00000513562 PCDHA4Q9UN74 947 aa12.17□□□□□ -0.46
DDX41-216ENST00000513562 MRPS23Q9Y3D9 190 aaKnown RBP12.17□□□□□ -0.46
DDX41-216ENST00000513562 ASPMQ8IZT6 3477 aa12.16□□□□□ -0.46
DDX41-216ENST00000513562 MYH15Q9Y2K3 1946 aa12.16□□□□□ -0.46
DDX41-216ENST00000513562 CASTOR2A6NHX0 329 aa12.16□□□□□ -0.46
DDX41-216ENST00000513562 SLC37A4O43826 429 aa12.16□□□□□ -0.46
DDX41-216ENST00000513562 GDF9O60383 454 aa12.16□□□□□ -0.46
DDX41-216ENST00000513562 FOXD2O60548 495 aaPredicted RBP12.16□□□□□ -0.46
DDX41-216ENST00000513562 RHOP08100 348 aa12.16□□□□□ -0.46
DDX41-216ENST00000513562 IFNAR1P17181 557 aa12.16□□□□□ -0.46
DDX41-216ENST00000513562 FCARP24071 287 aa12.16□□□□□ -0.46
DDX41-216ENST00000513562 NLRP5P59047 1200 aa12.16□□□□□ -0.46
DDX41-216ENST00000513562 SHC2P98077 582 aa12.16□□□□□ -0.46
DDX41-216ENST00000513562 FGD1P98174 961 aa12.16□□□□□ -0.46
DDX41-216ENST00000513562 DMWDQ09019 674 aa12.16□□□□□ -0.46
DDX41-216ENST00000513562 ELAVL2Q12926 359 aaKnown RBP12.16□□□□□ -0.46
DDX41-216ENST00000513562 TFDP1Q14186 410 aa12.16□□□□□ -0.46
DDX41-216ENST00000513562 TANGO2Q6ICL3 276 aa12.16□□□□□ -0.46
DDX41-216ENST00000513562 SLC27A1Q6PCB7 646 aa12.16□□□□□ -0.46
DDX41-216ENST00000513562 BRF1Q92994 677 aa12.16□□□□□ -0.46
DDX41-216ENST00000513562 MCRS1Q96EZ8 462 aa12.16□□□□□ -0.46
DDX41-216ENST00000513562 NFKBIZQ9BYH8 718 aa12.16□□□□□ -0.46
DDX41-216ENST00000513562 KCNMB3Q9NPA1 279 aa12.16□□□□□ -0.46
DDX41-216ENST00000513562 A0A1B0GUA9 196 aa12.15□□□□□ -0.46
DDX41-216ENST00000513562 B4GALT5O43286 388 aa12.15□□□□□ -0.46
DDX41-216ENST00000513562 NPTXRO95502 500 aa12.15□□□□□ -0.46
DDX41-216ENST00000513562 CEBPBP17676 345 aa12.15□□□□□ -0.46
DDX41-216ENST00000513562 CAPSQ13938 189 aa12.15□□□□□ -0.46
DDX41-216ENST00000513562 SIM2Q14190 667 aaPredicted RBP12.15□□□□□ -0.46
DDX41-216ENST00000513562 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.15□□□□□ -0.46
DDX41-216ENST00000513562 Q6ZUG5 572 aa12.15□□□□□ -0.46
DDX41-216ENST00000513562 OTUD6AQ7L8S5 288 aa12.15□□□□□ -0.46
DDX41-216ENST00000513562 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.15□□□□□ -0.46
DDX41-216ENST00000513562 CDR2LQ86X02 465 aaPredicted RBP12.15□□□□□ -0.46
DDX41-216ENST00000513562 ASAP3Q8TDY4 903 aa12.15□□□□□ -0.46
DDX41-216ENST00000513562 FAM20AQ96MK3 541 aa12.15□□□□□ -0.46
DDX41-216ENST00000513562 BRD9Q9H8M2 597 aa12.15□□□□□ -0.46
DDX41-216ENST00000513562 TRPV5Q9NQA5 729 aa12.15□□□□□ -0.46
DDX41-216ENST00000513562 MTRRQ9UBK8 725 aa12.15□□□□□ -0.46
DDX41-216ENST00000513562 PARP2Q9UGN5 583 aa12.15□□□□□ -0.46
DDX41-216ENST00000513562 FRYQ5TBA9 3013 aa12.15□□□□□ -0.46
DDX41-216ENST00000513562 SPEGQ15772 3267 aa12.15□□□□□ -0.46
DDX41-216ENST00000513562 PTGESO14684 152 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 ZBTB39O15060 712 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 HRO43593 1189 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 CPA1P15085 419 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 FGFR3P22607 806 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 CNR2P34972 360 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 OR1D2P34982 312 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 SATB1Q01826 763 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 GAS6Q14393 721 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 EPHA7Q15375 998 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 NAB2Q15742 525 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 NPY5RQ15761 445 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 XKR9Q5GH70 373 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 MAP4K3Q8IVH8 894 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 BLIDQ8IZY5 108 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 FBXL16Q8N461 479 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 DAGLBQ8NCG7 672 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 FAM3CQ92520 227 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 SLKQ9H2G2 1235 aaPredicted RBP12.14□□□□□ -0.47
DDX41-216ENST00000513562 ZSWIM4Q9H7M6 989 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 LMAN1LQ9HAT1 526 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 RGL1Q9NZL6 768 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 CACNA1GO43497 2377 aa12.14□□□□□ -0.47
DDX41-216ENST00000513562 WDR81Q562E7 1941 aa12.13□□□□□ -0.47
DDX41-216ENST00000513562 TM4SF5O14894 197 aa12.13□□□□□ -0.47
DDX41-216ENST00000513562 PAPSS2O95340 614 aaPredicted RBP12.13□□□□□ -0.47
DDX41-216ENST00000513562 CHRNB1P11230 501 aa12.13□□□□□ -0.47
DDX41-216ENST00000513562 KCNA4P22459 653 aa12.13□□□□□ -0.47
DDX41-216ENST00000513562 GLRA2P23416 452 aa12.13□□□□□ -0.47
DDX41-216ENST00000513562 ARL2P36404 184 aa12.13□□□□□ -0.47
DDX41-216ENST00000513562 CXCL12P48061 93 aa12.13□□□□□ -0.47
DDX41-216ENST00000513562 LIMK1P53667 647 aa12.13□□□□□ -0.47
DDX41-216ENST00000513562 COL9A2Q14055 689 aaPredicted RBP12.13□□□□□ -0.47
DDX41-216ENST00000513562 GRM2Q14416 872 aa12.13□□□□□ -0.47
DDX41-216ENST00000513562 FAM78AQ5JUQ0 283 aa12.13□□□□□ -0.47
DDX41-216ENST00000513562 PRSS36Q5K4E3 855 aa12.13□□□□□ -0.47
DDX41-216ENST00000513562 N4BP2L1Q5TBK1 243 aaPredicted RBP12.13□□□□□ -0.47
DDX41-216ENST00000513562 IL31Q6EBC2 164 aa12.13□□□□□ -0.47
DDX41-216ENST00000513562 IRF7Q92985 503 aa12.13□□□□□ -0.47
DDX41-216ENST00000513562 TRMT61BQ9BVS5 477 aaKnown RBP12.13□□□□□ -0.47
DDX41-216ENST00000513562 AGXT2Q9BYV1 514 aa12.13□□□□□ -0.47
DDX41-216ENST00000513562 ZFP14Q9HCL3 533 aa12.13□□□□□ -0.47
DDX41-216ENST00000513562 ZNF334Q9HCZ1 680 aaPredicted RBP12.13□□□□□ -0.47
DDX41-216ENST00000513562 BACE2Q9Y5Z0 518 aa12.13□□□□□ -0.47
DDX41-216ENST00000513562 CDY1Q9Y6F8 540 aa12.13□□□□□ -0.47
DDX41-216ENST00000513562 PIAS3Q9Y6X2 628 aa12.13□□□□□ -0.47
DDX41-216ENST00000513562 BAHCC1Q9P281 2608 aa12.12□□□□□ -0.47
DDX41-216ENST00000513562 ARHGEF37A1IGU5 675 aa12.12□□□□□ -0.47
DDX41-216ENST00000513562 CHURC1-FNTBB4DL54 471 aa12.12□□□□□ -0.47
DDX41-216ENST00000513562 TMEM189-UBE2V1I3L0A0 370 aa12.12□□□□□ -0.47
DDX41-216ENST00000513562 K7ESF4 209 aa12.12□□□□□ -0.47
DDX41-216ENST00000513562 NRG2O14511 850 aaPredicted RBP12.12□□□□□ -0.47
DDX41-216ENST00000513562 MICAL2O94851 1124 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms