RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 PAK1Q13153 545 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 SHHQ15465 462 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 NFIL3Q16649 462 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 EDRF1Q3B7T1 1238 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 DPCR1Q3MIW9 517 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 ZCWPW2Q504Y3 356 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 CT47A1Q5JQC4 288 aaPredicted RBP8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 PRPF38BQ5VTL8 546 aaKnown RBP8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 CENPPQ6IPU0 288 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 FOXR2Q6PJQ5 311 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 ZBTB33Q86T24 672 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 SLC9A9Q8IVB4 645 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 TDHQ8IZJ6 230 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 CRIPAKQ8N1N5 446 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 GPD1LQ8N335 351 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 CEP120Q8N960 986 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 SMG8Q8ND04 991 aaKnown RBP8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 PHOSPHO2Q8TCD6 241 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 TMEM174Q8WUU8 243 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 P2RX5Q93086 422 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 TSG101Q99816 390 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 CBWD1Q9BRT8 395 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 CCDC94Q9BW85 323 aaPredicted RBP8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 HAPLN2Q9GZV7 340 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 IKZF4Q9H2S9 585 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 PRO3102Q9H379 93 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 RSAD1Q9HA92 442 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 UBN1Q9NPG3 1134 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 TOPORSQ9NS56 1045 aaPredicted RBP8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 HSPBP1Q9NZL4 362 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 CXXC1Q9P0U4 656 aaPredicted RBP8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 AGO2Q9UKV8 859 aaKnown RBP8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 LRFN2Q9ULH4 789 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 GIT1Q9Y2X7 761 aa8.27□□□□□ -1.09
HMGXB3-204ENST00000513318 SYCE3A1L190 88 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 TRIM49BA6NDI0 452 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 CLIC2O15247 247 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 FAM189A1O60320 539 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 RECQL4O94761 1208 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 UPP2O95045 317 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 GJB5O95377 273 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 NR3C1P04150 777 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 CLTAP09496 248 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 CCDC192P0DO97 292 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 IBSPP21815 317 aaPredicted RBP8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 NR2F2P24468 414 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 RPL13P26373 211 aaKnown RBP8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 YARSP54577 528 aaKnown RBP8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 POU5F1Q01860 360 aaKnown RBP8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 TYRO3Q06418 890 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 MYBPC2Q14324 1141 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 KLHL10Q6JEL2 608 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 HERC6Q8IVU3 1022 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 THNSL1Q8IYQ7 743 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 ABI1Q8IZP0 508 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 XXYLT1Q8NBI6 393 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 RNF169Q8NCN4 708 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 NELFBQ8WX92 580 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 LPPQ93052 612 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 ACAP3Q96P50 834 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 RPS6KC1Q96S38 1066 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 APOL6Q9BWW8 343 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 SEMA6BQ9H3T3 888 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 RC3H2Q9HBD1 1191 aaKnown RBP8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 KIAA1586Q9HCI6 787 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 ANO10Q9NW15 660 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 SNTG2Q9NY99 539 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 PARP2Q9UGN5 583 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 CTNND2Q9UQB3 1225 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 HES2Q9Y543 173 aa8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 MTCL1Q9Y4B5 1905 aaKnown RBP8.26□□□□□ -1.09
HMGXB3-204ENST00000513318 LAMA2P24043 3122 aaKnown RBP8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 MEIS3P2A8K0S8 358 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 MAPK13O15264 365 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 INPPL1O15357 1258 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 EXTL3O43909 919 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 EXOC3O60645 756 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 DGKIO75912 1065 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 CXCL8P10145 99 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 FGFR1P11362 822 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 AKAP5P24588 427 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 ERCC5P28715 1186 aaPredicted RBP8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 MLH1P40692 756 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 TNFSF9P41273 254 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 ACOT2P49753 483 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 CYP2J2P51589 502 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 PMS1P54277 932 aaKnown RBP8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 OSTNP61366 133 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 HTRA4P83105 476 aaPredicted RBP8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 FKBP3Q00688 224 aaKnown RBP8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 PPP2R3AQ06190 1150 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 SURF1Q15526 300 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 ZSCAN23Q3MJ62 389 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 CLLU1OSQ5K130 101 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 TTI2Q6NXR4 508 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 GLB1LQ6UWU2 654 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 AGMOQ6ZNB7 445 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 LAPTM4BQ86VI4 370 aa8.25□□□□□ -1.09
HMGXB3-204ENST00000513318 BRSK2Q8IWQ3 736 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms