RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 CLASP2O75122 1294 aaKnown RBP19.41■□□□□ 0.7
DDR1-272ENST00000513243 PIGRP01833 764 aa19.41■□□□□ 0.7
DDR1-272ENST00000513243 SOD2P04179 222 aa19.41■□□□□ 0.7
DDR1-272ENST00000513243 LIG4P49917 911 aa19.41■□□□□ 0.7
DDR1-272ENST00000513243 HSP90AA2PQ14568 343 aaPredicted RBP19.41■□□□□ 0.7
DDR1-272ENST00000513243 LLGL2Q6P1M3 1020 aa19.41■□□□□ 0.7
DDR1-272ENST00000513243 ZNF720Q7Z2F6 126 aa19.41■□□□□ 0.7
DDR1-272ENST00000513243 DHX58Q96C10 678 aa19.41■□□□□ 0.7
DDR1-272ENST00000513243 HERC2P3Q9BVR0 1158 aa19.41■□□□□ 0.7
DDR1-272ENST00000513243 GPR62Q9BZJ7 368 aa19.41■□□□□ 0.7
DDR1-272ENST00000513243 TOPORSQ9NS56 1045 aaPredicted RBP19.41■□□□□ 0.7
DDR1-272ENST00000513243 ADAM28Q9UKQ2 775 aa19.41■□□□□ 0.7
DDR1-272ENST00000513243 HNRNPDLO14979 420 aaKnown RBP19.4■□□□□ 0.7
DDR1-272ENST00000513243 IDEP14735 1019 aa19.4■□□□□ 0.7
DDR1-272ENST00000513243 GAP43P17677 238 aa19.4■□□□□ 0.7
DDR1-272ENST00000513243 ABCD1P33897 745 aa19.4■□□□□ 0.7
DDR1-272ENST00000513243 COASYQ13057 564 aa19.4■□□□□ 0.7
DDR1-272ENST00000513243 RESP18Q5W5W9 173 aa19.4■□□□□ 0.7
DDR1-272ENST00000513243 SLC39A4Q6P5W5 647 aa19.4■□□□□ 0.7
DDR1-272ENST00000513243 MAP4K3Q8IVH8 894 aa19.4■□□□□ 0.7
DDR1-272ENST00000513243 IQUBQ8NA54 791 aa19.4■□□□□ 0.7
DDR1-272ENST00000513243 SNX27Q96L92 541 aa19.4■□□□□ 0.7
DDR1-272ENST00000513243 ZMAT2Q96NC0 199 aaKnown RBP19.4■□□□□ 0.7
DDR1-272ENST00000513243 CUEDC2Q9H467 287 aa19.4■□□□□ 0.7
DDR1-272ENST00000513243 MRPL17Q9NRX2 175 aaKnown RBP19.4■□□□□ 0.7
DDR1-272ENST00000513243 KBTBD4Q9NVX7 518 aa19.4■□□□□ 0.7
DDR1-272ENST00000513243 TBC1D7Q9P0N9 293 aa19.4■□□□□ 0.7
DDR1-272ENST00000513243 SEL1LQ9UBV2 794 aa19.4■□□□□ 0.7
DDR1-272ENST00000513243 HCFC2Q9Y5Z7 792 aa19.4■□□□□ 0.7
DDR1-272ENST00000513243 TTC28Q96AY4 2481 aa19.39■□□□□ 0.69
DDR1-272ENST00000513243 FRMD3A2A2Y4 597 aa19.39■□□□□ 0.69
DDR1-272ENST00000513243 POLR2DO15514 142 aaKnown RBP19.39■□□□□ 0.69
DDR1-272ENST00000513243 MBTPS2O43462 519 aa19.39■□□□□ 0.69
DDR1-272ENST00000513243 TADA2AO75478 443 aa19.39■□□□□ 0.69
DDR1-272ENST00000513243 PPP1R37O75864 691 aa19.39■□□□□ 0.69
DDR1-272ENST00000513243 KIF4AO95239 1232 aa19.39■□□□□ 0.69
DDR1-272ENST00000513243 MATR3P43243 847 aaKnown RBP eCLIP19.39■□□□□ 0.69
DDR1-272ENST00000513243 KRT85P78386 507 aa19.39■□□□□ 0.69
DDR1-272ENST00000513243 SMAD4Q13485 552 aaKnown RBP19.39■□□□□ 0.69
DDR1-272ENST00000513243 SLC10A6Q3KNW5 377 aa19.39■□□□□ 0.69
DDR1-272ENST00000513243 HERC4Q5GLZ8 1057 aaPredicted RBP19.39■□□□□ 0.69
DDR1-272ENST00000513243 KIAA0319Q5VV43 1072 aa19.39■□□□□ 0.69
DDR1-272ENST00000513243 FUT10Q6P4F1 479 aa19.39■□□□□ 0.69
DDR1-272ENST00000513243 TMEM87AQ8NBN3 555 aa19.39■□□□□ 0.69
DDR1-272ENST00000513243 SMRP1Q8NCR6 262 aa19.39■□□□□ 0.69
DDR1-272ENST00000513243 LEO1Q8WVC0 666 aaPredicted RBP19.39■□□□□ 0.69
DDR1-272ENST00000513243 B3GALT6Q96L58 329 aa19.39■□□□□ 0.69
DDR1-272ENST00000513243 STRA6Q9BX79 667 aa19.39■□□□□ 0.69
DDR1-272ENST00000513243 TNMDQ9H2S6 317 aa19.39■□□□□ 0.69
DDR1-272ENST00000513243 MRPL44Q9H9J2 332 aaKnown RBP19.39■□□□□ 0.69
DDR1-272ENST00000513243 CHST7Q9NS84 486 aa19.39■□□□□ 0.69
DDR1-272ENST00000513243 PANK4Q9NVE7 773 aa19.39■□□□□ 0.69
DDR1-272ENST00000513243 SPTBN5Q9NRC6 3674 aaKnown RBP19.38■□□□□ 0.69
DDR1-272ENST00000513243 A0A0B4J269 797 aa19.38■□□□□ 0.69
DDR1-272ENST00000513243 ANKRD63C9JTQ0 380 aa19.38■□□□□ 0.69
DDR1-272ENST00000513243 C2CD2LO14523 706 aa19.38■□□□□ 0.69
DDR1-272ENST00000513243 URODP06132 367 aa19.38■□□□□ 0.69
DDR1-272ENST00000513243 CNPP09543 421 aaKnown RBP19.38■□□□□ 0.69
DDR1-272ENST00000513243 KCNE1P15382 129 aa19.38■□□□□ 0.69
DDR1-272ENST00000513243 IGFBP6P24592 240 aaPredicted RBP19.38■□□□□ 0.69
DDR1-272ENST00000513243 GLUD2P49448 558 aa19.38■□□□□ 0.69
DDR1-272ENST00000513243 SOX4Q06945 474 aaPredicted RBP19.38■□□□□ 0.69
DDR1-272ENST00000513243 ANKRD54Q6NXT1 300 aa19.38■□□□□ 0.69
DDR1-272ENST00000513243 HASPINQ8TF76 798 aa19.38■□□□□ 0.69
DDR1-272ENST00000513243 SLC22A17Q8WUG5 538 aa19.38■□□□□ 0.69
DDR1-272ENST00000513243 SPATA32Q96LK8 384 aa19.38■□□□□ 0.69
DDR1-272ENST00000513243 KLHL5Q96PQ7 755 aa19.38■□□□□ 0.69
DDR1-272ENST00000513243 IKZF4Q9H2S9 585 aa19.38■□□□□ 0.69
DDR1-272ENST00000513243 GOLGA2P5Q9HBQ8 144 aa19.38■□□□□ 0.69
DDR1-272ENST00000513243 FAM13BQ9NYF5 915 aa19.38■□□□□ 0.69
DDR1-272ENST00000513243 CNTN3Q9P232 1028 aa19.38■□□□□ 0.69
DDR1-272ENST00000513243 FAM50BQ9Y247 325 aa19.38■□□□□ 0.69
DDR1-272ENST00000513243 TISP43B9A030 160 aa19.37■□□□□ 0.69
DDR1-272ENST00000513243 FAM189A1O60320 539 aa19.37■□□□□ 0.69
DDR1-272ENST00000513243 CLTAP09496 248 aa19.37■□□□□ 0.69
DDR1-272ENST00000513243 SRGAP2BP0DMP2 458 aa19.37■□□□□ 0.69
DDR1-272ENST00000513243 DSG1Q02413 1049 aa19.37■□□□□ 0.69
DDR1-272ENST00000513243 SMAD2Q15796 467 aaKnown RBP19.37■□□□□ 0.69
DDR1-272ENST00000513243 ZBTB41Q5SVQ8 909 aa19.37■□□□□ 0.69
DDR1-272ENST00000513243 KIAA1841Q6NSI8 718 aa19.37■□□□□ 0.69
DDR1-272ENST00000513243 SYCE2Q6PIF2 218 aa19.37■□□□□ 0.69
DDR1-272ENST00000513243 CASP10Q92851 521 aa19.37■□□□□ 0.69
DDR1-272ENST00000513243 HVCN1Q96D96 273 aa19.37■□□□□ 0.69
DDR1-272ENST00000513243 MSTO1Q9BUK6 570 aa19.37■□□□□ 0.69
DDR1-272ENST00000513243 EMILIN2Q9BXX0 1053 aa19.37■□□□□ 0.69
DDR1-272ENST00000513243 TRIM9Q9C026 710 aa19.37■□□□□ 0.69
DDR1-272ENST00000513243 LRRC27Q9C0I9 530 aa19.37■□□□□ 0.69
DDR1-272ENST00000513243 OLFML3Q9NRN5 406 aa19.37■□□□□ 0.69
DDR1-272ENST00000513243 SLC38A7Q9NVC3 462 aa19.37■□□□□ 0.69
DDR1-272ENST00000513243 SSX2IPQ9Y2D8 614 aa19.37■□□□□ 0.69
DDR1-272ENST00000513243 ATP6V1DQ9Y5K8 247 aa19.37■□□□□ 0.69
DDR1-272ENST00000513243 CUL9Q8IWT3 2517 aa19.37■□□□□ 0.69
DDR1-272ENST00000513243 TRIP11Q15643 1979 aa19.37■□□□□ 0.69
DDR1-272ENST00000513243 SF3B1O75533 1304 aaKnown RBP eCLIP19.36■□□□□ 0.698e-6■■■■■ 107
DDR1-272ENST00000513243 TNFRSF10AO00220 468 aa19.36■□□□□ 0.69
DDR1-272ENST00000513243 OGTO15294 1046 aa19.36■□□□□ 0.69
DDR1-272ENST00000513243 CXCL8P10145 99 aa19.36■□□□□ 0.69
DDR1-272ENST00000513243 EPCAMP16422 314 aa19.36■□□□□ 0.69
DDR1-272ENST00000513243 TNFSF9P41273 254 aa19.36■□□□□ 0.69
DDR1-272ENST00000513243 CLCNKBP51801 687 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms