RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 USP25Q9UHP3 1055 aa10.45□□□□□ -0.74
SNF8-211ENST00000512243 ATP11BQ9Y2G3 1177 aa10.45□□□□□ -0.74
SNF8-211ENST00000512243 A0A087WWV3 80 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 FAM237AA0A1B0GTK4 181 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 DCDC2CA8MYV0 355 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 DLL1O00548 723 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 TREHO43280 583 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 GAS2O43903 313 aaKnown RBP10.44□□□□□ -0.74
SNF8-211ENST00000512243 B4GALT4O60513 344 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 GADD45BO75293 160 aaPredicted RBP10.44□□□□□ -0.74
SNF8-211ENST00000512243 PRPF40AO75400 957 aaKnown RBP10.44□□□□□ -0.74
SNF8-211ENST00000512243 C22orf31O95567 290 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 CYP2C9P11712 490 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 CDK7P50613 346 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 NDUFA8P51970 172 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 ZNF200P98182 395 aaPredicted RBP10.44□□□□□ -0.74
SNF8-211ENST00000512243 EMC2Q15006 297 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 PTGISQ16647 500 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 LRRC26Q2I0M4 334 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 TXNDC11Q6PKC3 985 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 IGF2-ASQ6U949 168 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 MTHFD1LQ6UB35 978 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 ADAMTSL4Q6UY14 1074 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 GPBP1Q86WP2 473 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 FAM126BQ8IXS8 530 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 WFDC12Q8WWY7 111 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 SLC7A3Q8WY07 619 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 TP53INP1Q96A56 240 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 CCDC34Q96HJ3 373 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 HTATIP2Q9BUP3 242 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 BLOC1S4Q9NUP1 217 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 TRMT13Q9NUP7 481 aaKnown RBP10.44□□□□□ -0.74
SNF8-211ENST00000512243 HPSEQ9Y251 543 aa10.44□□□□□ -0.74
SNF8-211ENST00000512243 MBLAC1A4D2B0 266 aaPredicted RBP10.43□□□□□ -0.74
SNF8-211ENST00000512243 RPLP2P05387 115 aaKnown RBP10.43□□□□□ -0.74
SNF8-211ENST00000512243 KLRC1P26715 233 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 TMOD1P28289 359 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 NOS3P29474 1203 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 CDC25BP30305 580 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 CLCN3P51790 818 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 SLC12A3P55017 1021 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 ADAM17P78536 824 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 FAM160A1Q05DH4 1040 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 DHX8Q14562 1220 aaKnown RBP10.43□□□□□ -0.74
SNF8-211ENST00000512243 SETDB1Q15047 1291 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 NAALADL2Q58DX5 795 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 TAF2Q6P1X5 1199 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 SV2BQ7L1I2 683 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 ANKRD33Q7Z3H0 272 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 RSPH3Q86UC2 560 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 METTL13Q8N6R0 699 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 SYT2Q8N9I0 419 aaPredicted RBP10.43□□□□□ -0.74
SNF8-211ENST00000512243 MCPH1Q8NEM0 835 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 LRRC15Q8TF66 581 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 TOX2Q96NM4 488 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 CEP89Q96ST8 783 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 MAP7D2Q96T17 732 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 ARID3AQ99856 593 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 TIPINQ9BVW5 301 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 TRPV6Q9H1D0 765 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 TNMDQ9H2S6 317 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 DHX33Q9H6R0 707 aaKnown RBP10.43□□□□□ -0.74
SNF8-211ENST00000512243 KCND2Q9NZV8 630 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 PCDHA2Q9Y5H9 948 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 CEP290O15078 2479 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 SCN5AQ14524 2016 aa10.43□□□□□ -0.74
SNF8-211ENST00000512243 PDE4DIPQ5VU43 2346 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 LTBP2Q14767 1821 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 SMIM35A0A1B0GVV1 85 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 MAFO75444 373 aaPredicted RBP10.42□□□□□ -0.74
SNF8-211ENST00000512243 SMNDC1O75940 238 aaKnown RBP eCLIP10.42□□□□□ -0.74
SNF8-211ENST00000512243 ZNF202O95125 648 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 KIF4AO95239 1232 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 CD4P01730 458 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 KRT18P05783 430 aaKnown RBP10.42□□□□□ -0.74
SNF8-211ENST00000512243 CLTBP09497 229 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 SLFN14P0C7P3 912 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 PCSK2P16519 638 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 DNM2P50570 870 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 AMPD3Q01432 767 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 TLE2Q04725 743 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 MARCH8Q5T0T0 291 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 FAM102BQ5T8I3 360 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 RINT1Q6NUQ1 792 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 EFCAB12Q6NXP0 572 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 RUFY4Q6ZNE9 571 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 SERINC5Q86VE9 423 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 LRRC71Q8N4P6 559 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 CNNM3Q8NE01 707 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 CAGE1Q8TC20 777 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 TCP11Q8WWU5 503 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 ZBTB10Q96DT7 871 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 RUSC1Q9BVN2 902 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 LRRC27Q9C0I9 530 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 FAM49AQ9H0Q0 323 aaPredicted RBP10.42□□□□□ -0.74
SNF8-211ENST00000512243 SUGCTQ9HAC7 445 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 LMBRD1Q9NUN5 540 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 POLIQ9UNA4 740 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 AKT3Q9Y243 479 aa10.42□□□□□ -0.74
SNF8-211ENST00000512243 IGKV6-21A0A0C4DH24 114 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms